Castor canadensis (American beaver): 109690749
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Entry
109690749 CDS
T04791
Symbol
Smarcd3
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3 isoform X1
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
ccan
Castor canadensis (American beaver)
Pathway
ccan03082
ATP-dependent chromatin remodeling
ccan04714
Thermogenesis
ccan05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
ccan00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
109690749 (Smarcd3)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
109690749 (Smarcd3)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
109690749 (Smarcd3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccan03021
]
109690749 (Smarcd3)
03036 Chromosome and associated proteins [BR:
ccan03036
]
109690749 (Smarcd3)
Transcription machinery [BR:
ccan03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
109690749 (Smarcd3)
Chromosome and associated proteins [BR:
ccan03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
109690749 (Smarcd3)
PBAF complex
109690749 (Smarcd3)
GBAF(ncBAF) complex
109690749 (Smarcd3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIB
Motif
Other DBs
NCBI-GeneID:
109690749
NCBI-ProteinID:
XP_020025836
UniProt:
A0A8B7V1K4
LinkDB
All DBs
Position
Unknown
AA seq
495 aa
AA seq
DB search
MAADEVAGGARKATKSKLFEFLVHGVRPGMPSGARMPHQGAPMGPPGSPYMGSPAVRPGL
APAGMEPARKRAAPPPGQSQAQSQGQPVPTAPARSRSAKRRKMADKILPQRIRELVPESQ
AYMDLLAFERKLDQTIMRKRVDIQEALKRPMKQKRKLRLYISNTFNPAKPDAEDSDGSIA
SWELRVEGKLLDDVRPGPGLSRCPGPSKQKRKFSSFFKSLVIELDKDLYGPDNHLVEWHR
TPTTQETDGFQVKRPGDLSVRCTLLLMLDYQPPQFKLDPRLARLLGLHTQSRSAIVQALW
QYVKTNRLQDSHDKEYINGDKYFQQIFDCPRLKFSEIPQRLTALLLPPDPIVINHVISVD
PSDQKKTACYDIDVEVEEPLKGQMSSFLLSTANQQEISALDSKIHETIESINQLKIQRDF
MLSFSRDPKGYVQDLLRSQSRDLKVMTDVAGNPEEERRAEFYHQPWSQEAVSRYFYCKIQ
QRRQELEQSLVVRNT
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atggccgcggacgaagttgccggaggggcgcgcaaagccacgaaaagcaaactttttgag
tttctggtccatggggtgcgccccgggatgccgtctggagcccggatgccccaccagggg
gcgcccatgggccccccgggctccccttacatgggcagccccgccgtgcgacccggcctg
gcccccgcgggcatggagcccgcccgcaagcgagcagcgcccccgcccgggcagagtcag
gcacagagccagggccagccggtgcccaccgcccccgcgcggagccgcagtgccaagagg
aggaagatggctgacaaaatcctccctcaaaggattcgggagctggtccccgagtcccag
gcttatatggacctcctagcatttgagaggaaactggatcaaaccatcatgcggaagcgg
gtggacatccaggaggccctgaagaggcccatgaagcaaaagcggaagctgcgtctttat
atctccaatacttttaaccctgcgaagcctgatgccgaggattctgatggcagcattgcc
tcctgggagctgcgggtggaggggaagctcctggatgatgtacgtcctggcccaggtctc
tccaggtgtcctgggcccagcaagcagaaacggaagttctcttccttcttcaagagtttg
gtcatagagctggacaaagacctttatggccctgacaaccaccttgttgagtggcaccgg
acacccacaacccaggagacggatgggttccaggtgaagaggccaggtgacctaagtgtg
cgctgcacgctacttctcatgctggattaccagcctccccagttcaaactggacccccgc
ctggcccggctgctagggttgcacactcagagccgctcagccattgtccaggccctgtgg
cagtatgtgaagaccaataggctgcaggactcccacgacaaggaatacatcaatggagac
aaatatttccagcagatttttgactgtcctcggctgaagttttctgagattccccagcgc
ctcacagccctgttattgccccctgacccaattgtcatcaatcatgtcatcagcgtggac
ccatcagatcagaagaagacggcgtgctacgacattgacgtggaggtggaggagccgctg
aaagggcagatgagcagcttcctcctgtccacggccaaccagcaggagatcagtgctctg
gacagtaagatccatgagacgattgagtccataaaccagctcaagatccagagagacttc
atgctaagcttctccagagaccccaaaggctatgtccaagacctgctccgctcccagagc
cgggaccttaaggtgatgacagatgtggctggcaaccccgaagaggagcgccgggctgaa
ttctaccaccagccttggtcccaggaagcagtcagccgctacttctactgcaagatccag
cagcgcaggcaggagctggagcagtcactggttgtgcgcaacacctag
DBGET
integrated database retrieval system
