Castor canadensis (American beaver): 109691109
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Entry
109691109 CDS
T04791
Symbol
Hif3a
Name
(RefSeq) hypoxia-inducible factor 3-alpha isoform X1
KO
K09096
hypoxia-inducible factor 3 alpha
Organism
ccan
Castor canadensis (American beaver)
Brite
KEGG Orthology (KO) [BR:
ccan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccan03000
]
109691109 (Hif3a)
Transcription factors [BR:
ccan03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
109691109 (Hif3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
bHLH_HIF1A
PAS_3
PAS_11
HIF-1
PAS
PAS_4
PAS_9
HLH
PAS_2
Motif
Other DBs
NCBI-GeneID:
109691109
NCBI-ProteinID:
XP_020026484
UniProt:
A0A8B7V651
LinkDB
All DBs
Position
Unknown
AA seq
666 aa
AA seq
DB search
MALGLQRARSSTELRKEKSRDAARSRRSQETEVLYQLAHTLPFARGVSAHLDKASIMRLT
ISYLRMHRLCAAGEWNQVGSGGEPLDSCYLKALEGFVMVLTTEGDMAYLSENVSKHLGLS
QLELIGHSIFDFIHPCDQEELQDALTPSPSLSKKPEAPTERCFSLRMKSTLTSRGRTLNL
KAATWKVLHCSGHMRAYKPPAQTSPAGSPRSEPPLQCLVLICEAIPHPGSLEPPLGRGAF
LSRHSLDMKFTYCDDRIAEVAGYSPDDLIGCSAYEYIHALDSDAVSRSIHTLLTKGQAVT
GQYRFLARSGGYLWTQTQATVVSGGRGPQSESIVCVHFLISRVEETGVVLSLEQTERHSR
RPRQRGTSSQKDASNPGARLDAPGPRILAFLHPPALSEAALAADPRRFCSPDLRRLLAPI
LDGPSGAATPSMPQAAQRPQSPLPADLPDEVLVGMEHARRLFATGKNLESGETDLDIAQD
ADALDLEMLAPYISMDDDFQLTSSEQLPRARQRPAGAIRRPRARSFHGLSPPTPEPTLLP
RWGSDPRLSCSSPSRGDPSAPSPVTGARKRALAQSSEDEGAELLGVRPPKRPPSPESGNF
LLPPLSLSFLLTGGPAPGSQRDADAPLLDMNEPLGLGPSLLSLYPDEDAAQPRSHFTPAA
GLAQVH
NT seq
2001 nt
NT seq
+upstream
nt +downstream
nt
atggcgctgggactgcagcgagcgaggtccagcaccgagctgcgcaaggagaagtcccgg
gatgccgctcgcagccggcgcagccaggagaccgaggtgctgtaccagctggcgcacacg
ctgcccttcgcgcgcggcgtcagcgcgcacctggacaaggcttccatcatgcgcctcacc
atcagctacctgcgcatgcaccgcctctgcgccgcaggagagtggaaccaggtgggatca
gggggtgaaccactggattcgtgctacctgaaggccctggagggcttcgtgatggtgctc
accacggagggagacatggcttacctgtcagaaaatgttagcaagcacctgggcctcagt
cagctggagctcatcggacacagtatatttgatttcatccatccctgcgaccaagaggag
ctgcaagacgccctgacccccagtcccagcctatccaagaagccggaggcccccacggag
cggtgcttttccttacgcatgaagagcaccctcaccagccgcgggcgcaccctcaatctc
aaggcggccacctggaaggtgctgcactgctctggacatatgagagcctacaagcccccc
gcacagacgtcccccgctggaagcccccgctcagagccccctctacaatgtctggtgctc
atctgtgaagccatcccccatccgggcagtctggagcccccgctgggccggggggccttc
ctcagccgccacagcctggacatgaagttcacttactgtgatgacaggattgcagaggtt
gctggctacagccctgacgacctgattggctgttctgcctatgagtacatccatgcgttg
gattcagatgcagtcagcaggagcatccacaccttgctgaccaagggccaggcagtaacc
gggcagtaccgcttcctggctcggagtggtggctacctgtggactcagacccaggccaca
gtggtgtcagggggccggggtccccaatcggagagcattgtctgtgtccacttcctgatc
agccgggtggaagagactggagtggtcctgtccctagagcaaacggagcgacactctcgc
agaccccgtcagcggggcacctcctctcagaaggacgcctctaatcctggggccaggctt
gacgcccctggtccccggatcctggccttcctgcacccccctgccctgagtgaagctgct
ctggctgctgacccccgccgattctgcagccctgacctccgtcgcctcctggcacccatc
ctagatgggccctcgggagccgccacacccagcatgccacaggctgcacagcgtccccaa
agtcctcttccggctgatctccctgatgaggtacttgtgggcatggagcatgcacgcaga
ctcttcgccactgggaagaacctggagtcaggggagacagatctagatatagctcaggat
gccgacgccctggacttggagatgctggctccatacatctccatggacgacgacttccag
ctcacctccagcgagcagctgcccagggcccgccaaagacctgcaggtgccatccgccgg
ccccgagcgcggagcttccatggcctgtcacccccaacccctgagcccaccctgctgccc
cgctgggggagtgacccccgactgagctgctccagcccttccagaggggacccctcagca
ccctcccctgtgaccggggctcggaagagggccctggcccagagctcagaggacgagggg
gcagagctgctgggagtgaggccccccaaaaggccccccagcccagaatccggaaacttc
ctgctgcctcctctcagcctgagtttccttctaacaggaggacccgccccaggaagccag
cgggatgctgacgccccactcttggacatgaatgagcccttgggcctgggcccctcgctg
ctctctctctaccctgacgaagacgccgctcagcccaggagccacttcaccccagccgca
ggcttggcgcaggtccactga
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