Castor canadensis (American beaver): 109691159
Help
Entry
109691159 CDS
T04791
Symbol
Ift57
Name
(RefSeq) intraflagellar transport protein 57 homolog
KO
K04638
intraflagellar transport protein 57
Organism
ccan
Castor canadensis (American beaver)
Pathway
ccan05016
Huntington disease
ccan05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
ccan00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05016 Huntington disease
109691159 (Ift57)
05022 Pathways of neurodegeneration - multiple diseases
109691159 (Ift57)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ccan03037
]
109691159 (Ift57)
Cilium and associated proteins [BR:
ccan03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex B2
109691159 (Ift57)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
IFT57
MCPsignal
Mod_r
DUF745
DUF6074
SpecificRecomb
VASP_tetra
Motif
Other DBs
NCBI-GeneID:
109691159
NCBI-ProteinID:
XP_020026551
UniProt:
A0A8C0WHT1
LinkDB
All DBs
Position
Unknown
AA seq
429 aa
AA seq
DB search
MAAAAAVVSPSGLEDGVSRSRGEGAGEAVVERGPGAAYHMFVVMEDLVEKLKLLRYEEEL
LRKSNLKPPSRHYFALPTNPGEQFYMFCTFAAWLINKTGRPFEQPQEYDDPNATISSILS
ELRSFGRTADFPPSKLKSGYGEHVCYVLDCLAEEALKYVGFTWKRPSYPVEELEEETVPE
DDVELTLSKVDEEFVEEETDNEENFIDLNVLKAQTYRLDMNESAKQEDILESTTDAAEWS
LEVERVLPQLKVTIRTDNKDWRIHIDQMHQHKSGIESALKETKAFLDKLHNEISRTLEKI
GSREKYINNQLEHFVQEYRAAQAQLSEAKDRYQQGNGGVTERTRLLSEVTEELEKVKQEM
EEKGSSMTDGAPLVKIKQSLTKLKQETIHMDIRISVVEHTLLQSKLKEKSNMTRDMHATV
IPESAMGSY
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atggctgccgctgcagcagtggtctcgccgtcgggtttggaggatggggtgtctcggtcg
cgcggcgaaggggcaggggaggcggtggtggagcgcgggccgggtgcggcctaccacatg
ttcgtggtgatggaggacttggtggagaagctgaagctgctccgctacgaggaggaactc
ctccgcaagagcaacctgaagcccccgtccagacactattttgctctgcctaccaaccct
ggtgaacagttctacatgttttgcacttttgctgcttggttgattaacaaaacaggacgt
ccctttgagcagcctcaagaatatgatgaccctaatgcaacaatatctagcatattatct
gagcttcggtcatttgggagaactgcagattttcccccttcaaagctgaagtcaggttat
ggagaacatgtatgctatgttcttgattgtttagctgaagaagcattaaaatatgttggt
ttcacctggaaaaggccatcatacccagtggaagaattagaagaagaaactgttccagaa
gatgatgtagaattaacattaagtaaagtggatgaagaatttgtggaagaggagacagat
aatgaagaaaactttattgatctcaacgttttaaaggctcagacctatcgcttggacatg
aacgaatctgccaaacaagaagatattttggaatccacaacagatgctgcagaatggagt
ctagaagttgaacgtgtactgccacaactgaaagtcacgattaggactgacaataaggat
tggagaatccatattgaccaaatgcaccaacacaaaagtggaattgaatctgctctaaag
gagaccaaggcatttttggacaaactccataatgaaattagtaggactctggaaaagatt
ggcagcagagaaaagtacatcaacaatcaacttgagcactttgttcaagaatatcgtgca
gctcaagcccagctgagtgaggcaaaggaccgctaccagcagggaaatggtggagtgact
gaaaggaccagactcctgtcggaggttacagaagaattagaaaaggtaaaacaagaaatg
gaagaaaagggcagcagtatgactgatggtgctcctttggtgaagattaaacagagctta
acaaaactgaagcaagaaactattcatatggacattagaatcagtgttgtggaacacacc
ttactccaatcaaaactgaaggagaagtccaacatgactagagacatgcatgccacagtt
atcccagaatccgcaatgggctcctattaa
DBGET
integrated database retrieval system
