Castor canadensis (American beaver): 109691253
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Entry
109691253 CDS
T04791
Symbol
Edc4
Name
(RefSeq) enhancer of mRNA-decapping protein 4
KO
K12616
enhancer of mRNA-decapping protein 4
Organism
ccan
Castor canadensis (American beaver)
Pathway
ccan03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ccan00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
109691253 (Edc4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccan03019
]
109691253 (Edc4)
Messenger RNA biogenesis [BR:
ccan03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
109691253 (Edc4)
mRNA degradation factors
5'-3' decay
Decapping complex
109691253 (Edc4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ge1_WD40
EDC4_C
WD40
WD40_WDHD1_1st
Beta-prop_EDC4L
DUF445
Beta-prop_TEP1_2nd
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_HPS5
WDR55
EIF3I
Motif
Other DBs
NCBI-GeneID:
109691253
NCBI-ProteinID:
XP_020026714
UniProt:
A0A8B7V6T2
LinkDB
All DBs
Position
Unknown
AA seq
1402 aa
AA seq
DB search
MASCASIDIEDATQHLRDILKLDRPAAGPSADNQRPSSAYNGDLNGLLVPDPLSSGDGTS
TSKSGLRTMPPINLQEKQVICLSGDDSSTCIGILAKEVEIVASSDSSISSKARGSNKVKI
QPVAKYDWEQKYYYGNLIAVSNSFLAYAIRAANNGSAMVRVISVSTSERTLLKGFTGSVA
DLAFAHLNSPQLACLDEAGNLFVWRLALVNGKIQEEILVHIRQPEGTPLNHFRRIIWCPF
IPEESEDCCEESSPTVALLHEDRAEVWDLEMLRSSHSTWPVDVSQIKQGFIVVKGHSTCL
SEGALSPDGTVLATASHDGYVKFWQIYIEGQDEPRCLHEWKPHDGRPLSCLLFCDNHKKQ
DPEVPFWRFLITGADQNRELKMWCTVSWTCLQTIRFSPDIFSSVSVPPSLKVCLDLSAEY
LILSDVQRKVLYVMELLQNQEEGRACFSSISEFLLTHPVLSFGIQVVSRCRLRHTEVLPA
EEENDSLGAESSHGTGALESAAGVLIKLFCVHTKALQDVQIRFQPQLNPDVVAPLPAHTS
HEDFAFGESRPELGSESLGSAAHGSQPDLRRIVELPAPADFLSLSSETKPKLMTPDAFMT
PTASLQQITASPSGSSSSSSSSSSSSSSSSLTAVSAMSSTSAVDPSLPRPPEELTLSPKL
QLDGSMTMSSNSSLQASPRSLLPGLLPGPADKLTPKGPGQVSTAASTLPLELQEVEPLGL
PQASPSRTRSPDVISSASTALSQDIPEIASEALSRGFGSSAPEGLEADSMASAASALHLL
SPRPRPGPELGPQLGIDGGPGDGDRHSTPSLLEAALTQEAAPPDSQVWPTAPDITRETCS
TLAESPRNGLQEKHKSLAFHRPHYHLLQQHDSQDTSAEQSDHDDEVASLASASGGFGTKI
PTARLSAKDWKTKASPRTSPKLKRKNKKDNGDSAVGSRLTEHQMAEPPEDWPALIWQQQR
ELAELRHSQEELLQRLCAQLEGLQSTVTGHLERALETRHEQEQRRLERALAEGQHRGGQL
QEQLTQQLSQALSSAVAGRLERSIRDEIKKTVPPCVSRSLEPVAGQLSNSVATKLTAVEG
SMKENISKLLKSKNLTDAIARAAADTLQGPMQAAYREAFQSVVLPAFEKSCQAMFQQIND
SFRLGTQEYLQQLESHMKSRKAREQEAREPVLAQLRGLVSTLQSATEQMVATVSSSVRAE
VQHQLHLAVGSLQESILAQVQRIVKGEVSVALKEQQATVTSSIMQAMRSAAGTPVPSAHL
DCQAQQAHILQLLQQGHLNQAFQQALTAADLNLVLYVCETVDPAQVFGQPPCPLSQPVLL
SLIQQLASDLGTRTDLKLSYLEEAVMHLDHSDPITRDHMGSVMAQVRQKLFQFLQAEPHN
SLGKAARRLSLMLHGLVTPSLP
NT seq
4209 nt
NT seq
+upstream
nt +downstream
nt
atggcctcctgcgcgagcatcgacatcgaggacgccacgcagcacctgcgggatattctc
aagctggaccgacccgcagcgggccccagtgcagacaaccagaggccatccagtgcctac
aatggggatctcaatgggctactggtcccagaccccctcagctcaggtgatggtacatca
acaagcaagtctggtctgcgtaccatgccacccattaacctgcaggagaagcaggtcatc
tgcctctctggagatgacagctccacctgtatcgggattttggccaaggaagtggagatt
gtggccagcagtgactctagcatttcaagcaaggcacggggaagcaacaaggtgaaaatc
cagcctgttgccaagtatgactgggagcagaagtactactatgggaacttgattgctgtg
tctaactccttcttggcctatgccattcgggctgccaacaatggttcggcaatggtgcga
gtgatcagtgtcagtacttcggagcgaactctactcaagggcttcacaggcagtgtggct
gatttggcttttgcacacctcaactctccacaactcgcctgcttagatgaggcaggcaac
ctgtttgtgtggcgcttggctctggttaatggcaaaattcaagaagagatcttagtgcat
atccggcagccagagggcacaccactaaaccacttccgaaggatcatctggtgccctttc
atccctgaggagagtgaggactgctgtgaggagagcagtccaacggtggccctgcttcat
gaagaccgggctgaggtgtgggacctggagatgctccgctccagccatagtacttggcct
gtggatgtcagccaaatcaaacagggcttcattgtggtaaaaggccatagcacgtgccta
agtgaaggagccctctcccctgatgggactgtcctggctactgcaagccatgatggttat
gtcaagttctggcagatctacattgaggggcaggatgagccaaggtgtctgcacgagtgg
aagcctcatgatgggcggcccctctcctgccttctgttctgtgacaaccataagaaacag
gaccctgaggtccctttctggaggttcctcattactggtgctgaccagaatcgagaattg
aagatgtggtgcacagtgtcctggacctgtctgcaaaccattcgcttctctccagatatc
ttcagttcagtgagtgtgcctcccagcctcaaggtttgcttagacctctcagcagaatac
ctgattctcagcgatgtacaacggaaggtcctctatgtcatggagctgctgcagaaccag
gaggagggccgtgcctgcttcagctccatctcagaatttctgctcacccatcctgtgctg
agctttggcatccaggttgtgagtcgctgtcggctgcggcacactgaggtgctgcctgct
gaggaggagaatgacagcctgggggctgagagttcccatggaacaggtgctttggagtct
gcagctggtgtgcttatcaaactcttttgtgtacatactaaggcactacaagatgtgcag
atccgctttcagccacaactgaaccctgatgtggtggccccactccctgcccacacttcc
catgaggactttgcctttggagagtctcgacctgaactgggctctgagagccttggatca
gctgctcacggctcccagcctgacctccgacgcattgtggagctgcctgcacccgccgac
ttcctcagcctgagcagtgagaccaagcctaagttgatgacacctgatgcctttatgaca
cccactgcctccttgcagcagatcactgcatcccctagtggtagcagcagtagcagcagc
agcagcagtagcagtagcagcagcagctctctaacagctgtgtctgccatgagcagcacc
tcagctgtggatccctccttgcccaggccacctgaagagctgaccttgagccccaagctg
cagctagatggcagtatgacaatgagcagcaacagcagcctgcaggcaagccctcgtagc
cttcttcccggcctgctcccaggcccagctgacaaattgactcccaagggccctggacag
gtatctactgctgcctctacactgcccctggagctgcaggaagtagagcccctagggcta
ccccaggcctcccccagtcgcacccgctcccctgatgttatctcctcggcttccactgcc
ctgtcccaggacatccctgagattgcatctgaagccctctcccgtggctttggctcctct
gctccagagggccttgaggcagatagtatggcctcagctgcctcggcactacacctgctg
tccccacggccccgaccagggcctgagcttggcccccagcttggcatagatggaggccct
ggggatggggatcgacatagcaccccgtccctgctagaggcagccttgacccaggaggct
gcacctccagacagtcaggtctggcctacagcaccagacattactcgtgagacctgtagc
actctggcagagagtcccaggaatggcctccaagagaagcataaaagcttagccttccac
cgaccacattaccacctgcttcagcaacatgacagccaggacaccagtgctgagcaaagt
gaccacgatgatgaagtggccagccttgcctctgcctcaggaggctttggcaccaaaatt
cctactgcacggctctctgccaaggattggaaaaccaaggcatcccctcggacctcacct
aagctaaagaggaaaaacaagaaggataatggggattcagctgtgggatcccggctcact
gaacaccagatggcagagccccctgaggactggccggcactaatttggcagcagcagaga
gagctggcagaactgcggcacagccaagaagagctgctacagcgactgtgtgcccaactt
gaaggtctgcagagcactgtcacgggccatttagaacgtgccctcgagacccggcatgaa
caggaacagcggcgactagagcgggcactggctgaggggcagcatcggggtgggcaactg
caggagcagctgacgcagcagctgtctcaggcactgtcttcagctgtggctggacgactg
gagcgcagcatacgggatgagatcaagaagacggttcctccatgtgtctccaggagtctg
gagcctgttgcaggtcagctgagcaactcggttgctaccaagcttacagctgtggagggc
agtatgaaagagaatatctccaaactactcaagtccaagaacttgacagatgccattgcc
cgagctgctgcagacacattacaggggccgatgcaggctgcctaccgagaagcctttcag
agtgtggtgttgccagccttcgaaaagagctgtcaggccatgttccagcagatcaatgat
agctttcgactgggcacacaggaatacttgcagcagctagagagccacatgaagagtcgg
aaggcacgggaacaggaggccagggagcctgtgctagctcagcttcggggcctggtcagc
acactgcagagtgccactgagcagatggtggccactgtgtccagcagtgttcgtgctgag
gtgcagcaccagctccatttggctgtgggcagcctgcaggaatcaattttagcacaagta
caacgtatcgttaagggtgaggtaagcgtggcactcaaggaacaacaggccactgtcacc
tccagcatcatgcaggccatgcgttcagctgccggcacacctgtcccctctgcccacctt
gactgccaggcccaacaagcccatatcctgcagttgttgcagcagggccacctcaatcag
gccttccagcaggcactgacagctgctgacctgaacctggtgctgtatgtgtgtgaaact
gtggacccagcccaggtttttgggcagccaccctgcccgctctcccagcctgttctcctt
tccctcatccagcagctggcatctgacctaggcactagaactgacctcaagctcagctac
ctggaagaggctgtgatgcacctggaccacagtgaccccatcactcgagaccacatgggc
tctgtcatggctcaggtgcgccagaagctcttccagttcctgcaggctgaaccacacaac
tcacttggcaaagcagcccggcgtctcagcctaatgctgcacggccttgtgacccccagt
ctcccttag
DBGET
integrated database retrieval system
