KEGG   Castor canadensis (American beaver): 109691382
Entry
109691382         CDS       T04791                                 
Symbol
Rfc4
Name
(RefSeq) replication factor C subunit 4
  KO
K10755  replication factor C subunit 2/4
Organism
ccan  Castor canadensis (American beaver)
Pathway
ccan03030  DNA replication
ccan03410  Base excision repair
ccan03420  Nucleotide excision repair
ccan03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:ccan00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    109691382 (Rfc4)
   03410 Base excision repair
    109691382 (Rfc4)
   03420 Nucleotide excision repair
    109691382 (Rfc4)
   03430 Mismatch repair
    109691382 (Rfc4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ccan03032]
    109691382 (Rfc4)
   03036 Chromosome and associated proteins [BR:ccan03036]
    109691382 (Rfc4)
   03400 DNA repair and recombination proteins [BR:ccan03400]
    109691382 (Rfc4)
DNA replication proteins [BR:ccan03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    109691382 (Rfc4)
  DNA Replication Termination Factors
   ELG1-RFC complex
    109691382 (Rfc4)
Chromosome and associated proteins [BR:ccan03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    109691382 (Rfc4)
DNA repair and recombination proteins [BR:ccan03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     109691382 (Rfc4)
  Check point factors
   HRAD17(Rad24)-RFC complex
    109691382 (Rfc4)
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 Rad17 AAA_assoc_2 DUF815 AAA_16 AAA_22 AAA_11 DNA_pol3_delta AAA_30 AAA_24 Mg_chelatase AAA_28 RuvB_N SLFN-g3_helicase AAA_5 AAA_19 Viral_helicase1 ResIII AAA_7 HrcA_DNA-bdg
Other DBs
NCBI-GeneID: 109691382
NCBI-ProteinID: XP_020026931
UniProt: A0A250YGH5
LinkDB
Position
Unknown
AA seq 364 aa
MQAFLKGTSISTKPPPSKDRVVAATVGSSGENKKVKPVPWVEKYRPKCVDEVAFQEEVVA
VLKKSLEGADLPNLLFYGPPGTGKTSTILAAARELFGPELFRLRVLELNASDERGIQVVR
EKVKNFAQLTVSGSRSDGKPCPPFKIVILDEADSMTSAAQAALRRTMEKESKTTRFCLIC
NYVSRIIEPLTSRCSKFRFKPLSDKTQQQRLLDIAEKEKVKISNEGIAYLVKVSEGDLRK
AITFLQSATRLTGGKEVMEKVITDIAGVIPAETIDGIFTACESGSFDKLEAVVKDLINEG
HAATQLVNQLHDVVVENDNLSDKQKSIITEKLAEVDKCLADGADEHLQLISLCATVMQQL
TQNC
NT seq 1095 nt   +upstreamnt  +downstreamnt
atgcaagcatttctaaaaggcacatctatcagtactaaaccaccaccgagcaaggatcga
gtagtagctgccactgtgggaagcagtggagagaacaagaaagtcaaacctgttccatgg
gtggaaaaatatcgaccaaaatgtgtggatgaagttgctttccaggaagaagtagttgcg
gtgctaaaaaagtctttagaaggagcggatctccctaatctcttgttttatggaccacct
ggaactggtaaaacatccactattttggcagcagctagagaactctttgggcctgaactg
tttcgattaagagttcttgagttaaatgcatctgatgaacgtggaatacaagtagttcga
gagaaagtgaaaaattttgctcaattaactgtgtcaggaagtcgttcagatgggaagcca
tgtcctcctttcaagattgtaattctggatgaagcagattctatgacctcagctgctcag
gcagctttaagacgtaccatggagaaagagtctaaaacaacccgattctgtctcatctgt
aactatgtcagtcgaataattgaacctctgacctctagatgttcaaaattccgtttcaaa
cctctgtcagataaaactcaacagcagcggttactagacattgctgagaaagaaaaggtc
aaaattagcaacgagggaatagcttatcttgttaaagtatcagaaggagacttaaggaaa
gccattacatttcttcaaagtgctactcgattaacaggtggaaaagaggtcatggaaaaa
gtgatcacagacattgctggggtaataccagctgagacaattgatggaatattcactgca
tgtgagagtggctctttcgacaaactagaagctgtggtgaaggacttaataaatgagggt
catgcagcaactcagcttgtgaatcaactccatgatgtggttgtagaaaatgacaacctt
tctgacaaacagaagtccatcattacagaaaaacttgctgaagttgataaatgcttagca
gatggtgctgatgaacacttacagctgatcagcctttgtgctactgtgatgcaacaatta
acccagaactgttag

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