Castor canadensis (American beaver): 109691600
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Entry
109691600 CDS
T04791
Symbol
Msh2
Name
(RefSeq) LOW QUALITY PROTEIN: DNA mismatch repair protein Msh2
KO
K08735
DNA mismatch repair protein MSH2
Organism
ccan
Castor canadensis (American beaver)
Pathway
ccan01524
Platinum drug resistance
ccan03430
Mismatch repair
ccan05200
Pathways in cancer
ccan05210
Colorectal cancer
Brite
KEGG Orthology (KO) [BR:
ccan00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
109691600 (Msh2)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
109691600 (Msh2)
09162 Cancer: specific types
05210 Colorectal cancer
109691600 (Msh2)
09176 Drug resistance: antineoplastic
01524 Platinum drug resistance
109691600 (Msh2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ccan03400
]
109691600 (Msh2)
DNA repair and recombination proteins [BR:
ccan03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
109691600 (Msh2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_II
MutS_I
AAA_27
Tex_central_region
FeoA
Motif
Other DBs
NCBI-GeneID:
109691600
NCBI-ProteinID:
XP_020027294
UniProt:
A0A8B7V8M5
LinkDB
All DBs
Position
Unknown
AA seq
936 aa
AA seq
DB search
MAVQPKETLQLEGPAEVGFVRFFEGMPEKPTTTVRLFDRGDFYTAHGEDALLAAREVFKT
QGVIKYMGPAGAKTLQSVVAQLKXLXVLFVKDLLLFVRYRVEVFKELELKXGTKENDWYW
HFKASPGNLSQFEDILFGNNDMSASIGVVGVKMSTVDGQRQVGVGYVDSIQRKLGLCEFP
DNDQFSNLEALLIQIGPKECVLPGGETAGDMGKLRQVIQRGGILITERKKAEFSTKDIYQ
DLNRLLKGKKGEQMNSSALPEMENQVAVSSLSAVIKFLELLSDDSNFGQFDLTTFDFSQY
MKLDIAAVRALNLFQGSVEDTTGSQSLAALLNKCKTPQGQRLVNQWIKQPLMDKNRIEGG
KLNLVEAFVEDAELRQSLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPNVI
QALEKYEGRHQALLLAVFVVPLVDLRSDFSKFQEMIETTLDMDQVENHEFLVKPSFDPNL
SELREVMDNLEKKMQATLSRAARELGLDPGKQIKLDSSAQFGYYFRVTCKEEKVLRNNKN
FSTVDIQKNGVKFTNSELSSFNEEYAKNKAEYEEAQDAIVKEIVNISSGYVEPMQTLNDV
LAQLDAVVSFAYVSNGAPVPYVRPVILEKGQGRIILKASRHACVEVQDDVAFIPNDVHFE
KDKQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAEVSIVDCILARVGAGDSQ
LKGISTFMAEMLETASILRSATKDSLIIIDELGRGTSTYDGFGLAWAISDYIATKIGAFC
MFATHFHELTALASQIPIVNNLHVTALTTEETLTMLYQVKRGVCDQSFGIHVAELANFPK
HVIECAKQKALELEEFQNIGASQGRSEMEPAAKRCYLEREQGEKIIQEFLAKVKQVPFTE
MSEENIAKKLKQLKAEVMAKNNSFINELISRIKVTT
NT seq
2811 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgcagccgaaggagacgctgcagctggagggcccggccgaggtcggcttcgtg
cgcttcttcgagggcatgccagagaaaccgactaccacggtgcgcttattcgaccggggc
gacttctacacggcgcacggcgaggacgcgctgctggccgcccgcgaggtgttcaagacc
caaggcgtgatcaagtacatggggccggcaggagcaaagactctgcagagtgttgttgct
cagttaaaatgactttgagttctttttgtaaaagatcttcttctgttcgtcaggtataga
gttgaagtgtttaaggaattagagctgaaataaggcaccaaggagaacgattggtattgg
cattttaaggcttctcctggcaatctttctcagtttgaagacatcctatttggtaacaat
gatatgtcagcctccattggtgttgtgggtgttaaaatgtccacagttgacggtcaaaga
caggttggagttgggtatgttgattccatacagaggaagctgggactgtgtgagttccct
gataatgatcagttctccaatcttgaggctcttctgattcagattggaccaaaggagtgt
gttctaccaggaggagagactgctggtgacatgggaaaactgaggcaggttattcagaga
ggaggaattctgatcacagaaaggaaaaaagctgaattttctacaaaagacatttatcag
gacctcaatcggttgttgaaaggcaaaaagggagaacagatgaatagctctgctttgcca
gaaatggagaatcaggttgcagtttcatcattgtctgcagtaatcaagtttttagaactc
ttatcagatgattcaaattttggacagtttgacttgactacttttgacttcagccagtac
atgaagttggatattgcagcggttagagcacttaaccttttccagggctctgtcgaagat
accactggctctcagtctctggctgcattgttaaataaatgcaaaacccctcaaggtcag
agactagtcaaccaatggattaagcagcctctcatggataagaacagaatagaaggaggt
aaattaaatttggtggaagcttttgtagaagatgcagagttgaggcagagtttacaagaa
gatttacttcggcgattcccagatcttaaccgacttgccaagaaatttcaaagacaagca
gcaaacttgcaagattgttaccgactctaccagggcataaatcaactccctaatgttata
caggctctggaaaaatacgaaggaagacaccaggcattgttgctcgcagtttttgttgtt
cctcttgttgatcttcgttctgatttctctaagtttcaggaaatgatagaaacaacatta
gatatggatcaggtggaaaaccatgaattccttgtcaaaccttcatttgatcccaatctg
agtgaattaagggaagtaatggataacttggaaaagaagatgcaggctacattatcacgt
gcagctcgagagcttggattggaccctggcaaacagattaaattggattccagtgcacag
tttggatattactttcgagtaacctgcaaggaagaaaaagtccttcgtaacaataaaaac
ttcagtacagtagatatccagaagaatggtgttaaatttaccaacagtgagttgtcttct
ttcaatgaagaatatgctaaaaataaagccgaatatgaggaggcccaggatgccattgtt
aaagaaattgtcaatatttcttcaggctatgtagaaccaatgcagacactcaatgatgtg
ttggctcagctagatgctgttgtcagctttgcttatgtgtcaaatggagcacctgtaccg
tatgtacgaccagtcattttagagaaaggacaaggaagaattatattgaaagcgtccaga
catgcttgtgttgaagttcaagatgatgttgcatttattcctaatgatgtgcactttgaa
aaagataaacagatgttccacatcattactggccccaatatgggaggtaaatcaacttat
attcgccagactggagtgatagtactcatggcccaaattgggtgttttgtgccatgtgag
tcagcagaagtgtccattgtagattgcatcttggcacgggtcggggctggtgacagtcag
ttgaaaggaatctccacattcatggctgaaatgctggaaactgcttccatcctcaggtct
gcaaccaaagattctttaataatcatagatgaattgggaagaggaacctctacttatgat
ggatttgggttagcctgggctatatcagactatatcgcaacaaagattggcgctttttgc
atgtttgccacccatttccatgaacttactgcactggccagtcagattcccatcgttaac
aacctacatgtcacggcactaaccactgaagagaccttaactatgctttatcaggtgaag
agaggtgtctgtgatcagagttttggaattcatgttgcagagcttgcaaatttccccaag
cacgtaatagagtgcgccaagcaaaaagctctggagctcgaggagtttcagaatatcgga
gcctcacaagggcgcagtgaaatggaaccagcggcaaagaggtgctatctggaaagagag
caaggtgaaaaaattattcaggaatttctagccaaggtgaagcaagtgccctttactgaa
atgtcggaagaaaacatcgcaaaaaagttaaaacagttgaaagctgaggtgatggcaaag
aataatagttttataaatgaacttatttcacgaataaaggttactacgtga
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integrated database retrieval system
