Castor canadensis (American beaver): 109691660
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Entry
109691660 CDS
T04791
Symbol
Polr2b
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
ccan
Castor canadensis (American beaver)
Pathway
ccan03020
RNA polymerase
ccan03420
Nucleotide excision repair
ccan05016
Huntington disease
Brite
KEGG Orthology (KO) [BR:
ccan00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
109691660 (Polr2b)
09124 Replication and repair
03420 Nucleotide excision repair
109691660 (Polr2b)
09160 Human Diseases
09164 Neurodegenerative disease
05016 Huntington disease
109691660 (Polr2b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccan03021
]
109691660 (Polr2b)
03400 DNA repair and recombination proteins [BR:
ccan03400
]
109691660 (Polr2b)
Enzymes [BR:
ccan01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
109691660 (Polr2b)
Transcription machinery [BR:
ccan03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
109691660 (Polr2b)
DNA repair and recombination proteins [BR:
ccan03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
109691660 (Polr2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
DUF5817
Motif
Other DBs
NCBI-GeneID:
109691660
NCBI-ProteinID:
XP_020027400
UniProt:
A0A250Y753
LinkDB
All DBs
Position
Unknown
AA seq
1174 aa
AA seq
DB search
MYDADEDMQYDEDDDEITPDLWQEACWIVISSYFDEKGLVRQQLDSFDEFIQMSVQRIVE
DAPPIDLQAEAQHASGEVEEPPRYLLKFEQIYLSKPTHWERDGAPSPMMPNEARLRNLTY
SAPLYVDITKTVIKEGEEQLQTQHQKTFIGKIPIMLRSTYCLLNGLTDRDLCELNECPLD
PGGYFIINGSEKVLIAQEKMATNTVYVFAKKDSKYAYTGECRSCLENSSRPTSTIWVSML
ARGGQGAKKSAIGQRIVATLPYIKQEVPIIIVFRALGFVSDRDILEHIIYDFEDPEMMEM
VKPSLDEAFVIQEQNVALNFIGSRGAKPGVTKEKRIKYAKEVLQKEMLPHVGVSDFCETK
KAYFLGYMVHRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGMFKNLLKEVRIYAQ
KFIDRGKDFNLELAIKTRIISDGLKYSLATGNWGDQKKAHQARAGVSQVLNRLTFASTLS
HLRRLNSPIGRDGKLAKPRQLHNTLWGMVCPAETPEGHAVGLVKNLALMAYISVGSQPSP
ILEFLEEWSMENLEEISPAAIADATKIFVNGCWVGIHKDPEQLMNTLRKLRRQMDIIVSE
VSMIRDIREREIRIYTDAGRICRPLLIVEKQKLLLKKRHIDQLKEREYNNYSWQDLVASG
VVEYIDTLEEETVMLAMTPDDLQEKEVAYCSTYTHCEIHPSMILGVCASIIPFPDHNQSP
RNTYQSAMGKQAMGVYITNFHVRMDTLAHVLYYPQKPLVTTRSMEYLRFRELPAGINSIV
AIASYTGYNQEDSVIMNRSAVDRGFFRSVFYRSYKEQESKKGFDQEEVFEKPTRETCQGM
RHAIYDKLDDDGLIAPGVRVSGDDVIIGKTVTLPENEDELESTNRRYTKRDCSTFLRTSE
TGIVDQVMVTLNQEGYKFCKIRVRSVRIPQIGDKFASRHGQKGTCGIQYRQEDMPFTCEG
ITPDIIINPHAIPSRMTIGHLIECLQGKVSANKGEIGDATPFNDAVNVQKISNLLSDYGY
HLRGNEVLYNGFTGRKITSQIFIGPTYYQRLKHMVDDKIHSRARGPIQILNRQPMEGRSR
DGGLRFGEMERDCQIAHGAAQFLRERLFEASDPYQVHVCNLCGIMAIANTRTHTYECRGC
RNKTQISLVRMPYACKLLFQELMSMSIAPRMMSV
NT seq
3525 nt
NT seq
+upstream
nt +downstream
nt
atgtatgacgcggacgaggatatgcaatatgatgaagatgatgatgaaatcaccccagat
ttgtggcaagaagcatgctggattgtaatcagttcctattttgatgaaaaaggcttggtc
agacaacagctggattcttttgatgagtttattcagatgtctgttcaaagaattgtggaa
gatgctccccccatcgacctacaggctgaagctcagcatgccagtggagaagttgaagaa
ccgccaagatatttactgaagtttgaacaaatttacctctccaagcctacccattgggaa
agagatggtgccccttcaccaatgatgccaaacgaagccagattaagaaatctcacgtat
tctgctccactttatgttgatataacaaaaacagtcattaaagaaggcgaagagcagctt
cagactcagcatcagaaaactttcataggaaaaattccaattatgttgcgttcaacttat
tgcctattgaatggcttaacagatcgtgacctttgtgaattaaatgaatgtccattggat
cctggtggctatttcattattaatggatcagaaaaggttctgattgctcaagagaaaatg
gcaacaaacacagtctatgtgtttgccaaaaaggactctaaatatgcttacacaggagag
tgtagatcatgtctagagaattcttcccgacctaccagtactatatgggttagcatgctg
gcaagaggaggacagggtgcaaaaaagagtgctattggtcagcgcattgtggcaactcta
ccatatatcaagcaagaagttcccatcattattgtgttcagagcattaggttttgtgtct
gatagagatatcttagaacatattatttatgattttgaagatccagagatgatggaaatg
gttaaaccttctcttgatgaagcttttgtcatccaagaacagaacgttgcattaaatttc
attggttcaagaggggcaaagcctggtgttactaaagagaaaagaattaaatatgcaaag
gaagtcttacagaaagaaatgctccctcatgttggtgtcagtgatttttgtgagaccaaa
aaggcctatttcttggggtatatggttcatagactacttctagcagctttgggaagaaga
gaactagatgacagagatcactatggaaataaaagattggatcttgctgggccactactt
gcatttttatttagaggtatgtttaagaatttgctgaaagaagtgcgaatctatgcccag
aagttcattgatcgaggaaaggactttaacttggagttggccattaaaacaaggattata
tctgatggcctaaaatattctttagctactggaaactggggtgaccaaaagaaagctcat
caagccagagctggagtatctcaggtattaaatcgcctgacttttgcatctactctttct
cacttgcgtcgtttaaattctcctattggtagagatggcaagctagcaaagccaagacag
ttgcataatacgctgtggggaatggtgtgtcctgctgagaccccagagggccatgctgta
ggacttgtgaagaatttagctctgatggcgtatatttcagttggatctcagccttctcca
attctggaatttttagaagaatggagcatggaaaatttagaggaaatttctcctgcagct
attgctgatgcaaccaagatttttgttaatggatgctgggttggaatacataaagatcct
gaacaacttatgaacaccctgaggaagctgcggcgtcagatggacatcattgtgtctgaa
gtttctatgatcagagatattcgagagagggagattcggatctatacagatgcgggccgt
atttgtaggccactgctgattgtggaaaaacaaaagctacttttgaagaagagacatatt
gaccagttgaaagagagagaatataacaactacagttggcaggaccttgtggccagtgga
gtagtagaatatattgatacactagaagaggaaaccgtgatgcttgcaatgactccagat
gatttacaggagaaagaagtagcttattgttccacatatacccactgtgagattcaccca
tcaatgatccttggtgtctgtgcatctattattccctttcctgatcataaccagtcccca
agaaacacttaccagtctgctatgggtaagcaggctatgggagtttatatcaccaacttc
catgttcgtatggatacattggcccatgttctctattatcctcaaaaaccacttgtgact
acacggtctatggaatacctgcgattcagagagctgccagcaggtatcaactcaattgtg
gccattgcatcatacactggatataatcaggaagactcagtcatcatgaatcgttcagct
gtagaccgaggctttttcaggtctgttttttaccgctcatacaaagaacaggagtctaaa
aaaggatttgaccaagaagaagtttttgagaagcctacacgtgagacatgccagggtatg
aggcatgccatttatgacaaactggacgatgatggtttgatagctccaggggttcgtgta
tcaggagatgatgttattataggcaaaacagttaccttgcctgaaaatgaagatgagttg
gagagcactaacagacgctacaccaagagggactgtagcactttcctcagaaccagtgag
acaggaattgtggatcaggttatggtaactctgaaccaggaaggatataaattttgtaaa
ataagggtacgctctgttagaattccccagattggagacaaatttgctagtcgacatggt
cagaagggtacttgtggcatccagtatagacaagaggatatgcctttcacctgtgaaggt
atcactcctgatatcatcataaatccccatgccatcccctctcgtatgactattggtcac
ttgattgaatgtcttcaagggaaggtatcagctaacaagggtgaaattggcgatgctact
ccattcaatgatgctgttaatgtccagaagatttctaatcttttatctgattatggctac
catctcagaggaaatgaggtgctctataatgggttcacaggcaggaaaatcacatcacaa
atttttattggacccacttattaccagcgtttgaagcatatggtggatgacaaaattcat
tctcgtgccaggggacctattcagatccttaatagacagcccatggagggtagatctcgt
gatggtggcctgcgttttggagaaatggaacgagattgtcaaattgcccatggagcagcc
cagtttttaagagaaaggttgtttgaagcatcagatccgtatcaggttcatgtttgcaat
ctttgcggaataatggcaattgctaacaccaggacccatacatatgaatgcaggggctgc
cgcaataaaacccagatttctttggtgcggatgccttatgcatgcaagctgttgtttcag
gaacttatgtctatgagtattgcacctcgaatgatgagtgtttaa
DBGET
integrated database retrieval system
