KEGG   Castor canadensis (American beaver): 109691708
Entry
109691708         CDS       T04791                                 
Symbol
Thoc6
Name
(RefSeq) THO complex subunit 6 homolog isoform X1
  KO
K13175  THO complex subunit 6
Organism
ccan  Castor canadensis (American beaver)
Pathway
ccan03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:ccan00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    109691708 (Thoc6)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ccan03019]
    109691708 (Thoc6)
   03041 Spliceosome [BR:ccan03041]
    109691708 (Thoc6)
Messenger RNA biogenesis [BR:ccan03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     109691708 (Thoc6)
Spliceosome [BR:ccan03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    109691708 (Thoc6)
SSDB
Motif
Pfam: WD40_WDHD1_1st WD40 WD40_Prp19 WDR55 WD40_CDC20-Fz Beta-prop_TEP1_2nd Beta-prop_EML_2 Beta-prop_EML ANAPC4_WD40 NBCH_WD40 Beta-prop_CAF1B_HIR1 Beta-prop_IP5PC_F EIF3I WDR54 WD40_MABP1-WDR62_2nd Beta-prop_IFT122_1st Beta-prop_EIPR1 Beta-prop_TEP1_C Beta-prop_WDR75_1st Beta-prop_WDR90_POC16_2nd Beta-prop_RIG_2nd Beta-prop_SPT8 Beta-prop_SCAP Beta-prop_DCAF4
Other DBs
NCBI-GeneID: 109691708
NCBI-ProteinID: XP_020027469
UniProt: A0A250XZ59
LinkDB
Position
Unknown
AA seq 341 aa
MERASPLAVPLGQTEVFQTLQRLHMTIFSQSVSPCGKFLAAGNNYGQIAIFSLSAALSSE
AKEESKKPVVTFQAHDGPVYSMVSTDRQLLSAGDGEVKAWLWAEILKKGCKELWRRQPPY
RTSLEVPEINALLLAPKENSLILAGGDCQLHTMDLETGTFTRALRGHTDYIHCLALRERS
PEVLSGGEDGAVRLWDLRTAKEVQTIEVYKHEECARPHNGRWIGCLATDSDWMVCGGGPA
LTLWHLRSSTPTTIFPMRAPQKHVTFYQDLILSAGQGRCVNQWQLSGELKAQVPGSSPGL
LSLSLNQQPAAPECKVLTAAGNSCRVDVFTNLGYRAFSLSF
NT seq 1026 nt   +upstreamnt  +downstreamnt
atggagcgcgcttcaccgctcgcagttcctctgggtcagacagaggtgtttcagaccctg
cagcggctacacatgaccatcttctcccagagtgtctcgccctgtgggaagttcctggcg
gctggcaacaattatgggcagattgccatcttcagcttgtccgctgctttgagttctgag
gctaaagaggaaagcaagaagcctgtggtgaccttccaagcccatgatgggcctgtctac
agcatggtctccactgatcgccagctgctcagtgctggggatggggaggtgaaggcctgg
ctttgggcagagatccttaagaagggctgtaaggaactgtggcggcgtcagcccccatac
aggaccagcctggaagtgcctgagatcaatgccttgctgctcgcccccaaggagaattcc
ctcattctggctgggggagattgccagctgcacactatggaccttgaaactgggaccttc
actcgggccctccggggccacactgactacatccattgtctggcactgcgggaacggagc
cctgaggtgctgtctggtggcgaggatggggctgtgcgtctttgggatctccgcacagcc
aaagaggtccagaccatcgaggtgtataagcacgaggagtgtgcaaggccccataatggc
cgctggattggatgtttggcaacagattcagactggatggtctgtggaggtggcccagcc
ctcactctctggcaccttcgatcctccactcccaccaccatcttccccatgcgggcacca
cagaaacatgtcaccttctaccaggacctgattctgtccgcaggccagggccgctgtgtc
aatcagtggcaactgagtggggagctcaaggctcaggtgcctggctcttccccaggactg
ctcagcctcagcctcaaccagcagccagcggcccccgagtgcaaggtcctgactgctgcg
ggcaacagctgccgagtggatgtcttcaccaacttgggttaccgagccttctctctgtcc
ttctga

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