Castor canadensis (American beaver): 109691845
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Entry
109691845 CDS
T04791
Symbol
Ddx18
Name
(RefSeq) ATP-dependent RNA helicase DDX18 isoform X1
KO
K13179
ATP-dependent RNA helicase DDX18/HAS1 [EC:
5.6.2.7
]
Organism
ccan
Castor canadensis (American beaver)
Brite
KEGG Orthology (KO) [BR:
ccan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ccan03041
]
109691845 (Ddx18)
03009 Ribosome biogenesis [BR:
ccan03009
]
109691845 (Ddx18)
Enzymes [BR:
ccan01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
109691845 (Ddx18)
Spliceosome [BR:
ccan03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
109691845 (Ddx18)
Ribosome biogenesis [BR:
ccan03009
]
Eukaryotic type
90S particles
Helicases
109691845 (Ddx18)
Pre-60S particles
109691845 (Ddx18)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
DUF4217
ResIII
Helicase_C_2
Motif
Other DBs
NCBI-GeneID:
109691845
NCBI-ProteinID:
XP_020027649
UniProt:
A0A250YKL0
LinkDB
All DBs
Position
Unknown
AA seq
664 aa
AA seq
DB search
MSYLQMKLLRKKIEKRNLKLRQRNLKLQVGASDVSLSETQNGNMLEETVKVGKVKKIKKN
SVNVGLSEVQNGDVSENTVENGKVKKSPQKSTILTNGETTTQSPNSESKKKKKKKRKMVN
DAEPDTKKAKIEEGTKASEETEDSVEKPGNEEEDSEVPSLPLGLTGAFEDTSFASLTNLV
NENTLKAIKEMGFTNMTEIQHKSIRPLLEGRDLLAAAKTGSGKTLAFLIPAIELIVKLKF
MPRNGTGVLILSPTRELAMQTFGVLKELMTHHVHTYGLIMGGSNRSAEAQKLGNGINIIV
ATPGRLLDHMQNTPGFMYKNLQCLVIDEADRILDVGFEEELKQIIKLLPTRRQTMLFSAT
QTRKIEDLARISLKKEPLYVGVDDDKANATVDGLEQGYVVCPSEKRFLLLFTFLKKNRKK
KVMVFFSSCKSVKYHYELLNYIDLPVLAIHGKQKQNKRTTTFFQFCNADSGILLCTDVAA
RGLDIPEVDWIVQYDPPDDPKEYIHRVGRTARGLNGRGHALLILRPEELGFLRYLKQSKV
PLNEFDFSWSKISDIQSQLEKLIEKNYFLHKSAQEAYKSYIRAYDSHSLKQIFNVNNLNL
PQVALSFGFKVPPFVDLNVKSNEGKLKKRGGGGGFGYQKTKKVEKSKIFKHISRKPSDSR
QFSH
NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtacctgcagatgaaactcctgcgcaagaagatcgagaaacggaacctcaaattg
cggcagcgaaacctaaagctacaggtaggagcatcagatgtcagcctttcagaaactcag
aatggaaatatgctggaagaaacagtgaaagttggaaaagttaaaaaaattaaaaaaaat
tctgtgaatgtgggcttgtcagaagtacaaaatggagatgtgtctgaaaacacagtagaa
aatggaaaagttaaaaaatctccccagaaatctactatattaaccaatggagaaacaaca
acacagtctcctaattctgaatcaaaaaagaaaaagaagaaaaagaggaaaatggtgaat
gatgctgagcctgatactaagaaagcaaaaattgaagaaggcaccaaggcttctgaagaa
acagaagacagtgtggaaaagccaggcaatgaggaagaggacagtgaagtgcccagcctg
cccctgggactgacaggtgcttttgaggatacttcatttgcttctctaactaatcttgtc
aatgaaaacactctgaaggcaataaaagaaatgggcttcacaaacatgactgagattcaa
cataaaagtattagaccacttctggaaggcagggatcttctagcagctgcaaaaacaggc
agtggcaaaactcttgcattcctcatccctgctattgaactcattgtcaagttaaagttc
atgcccaggaatggaacaggagtccttattctttcacctactagagaactggccatgcag
acttttggtgttcttaaggagctgatgactcaccacgttcacacgtatgggttgatcatg
gggggcagtaacagatctgctgaagcacagaaacttggtaatgggatcaacattattgtg
gctactccaggccgtctcctggaccatatgcagaacactccggggtttatgtataaaaac
ctgcagtgtctcgtcattgatgaggctgatcgtatcttggatgttgggtttgaagaggaa
ttaaagcaaattattaaacttttaccaacacgcagacagaccatgctgttttctgccaca
caaactcgaaaaattgaagacttggccaggatttctctgaaaaaagagccattgtatgtt
ggtgttgatgatgataaagctaatgccacggtggatggtcttgagcagggatatgttgtc
tgtccctctgaaaagagattccttctgctcttcacattcctcaagaagaaccgaaagaag
aaagtgatggttttcttttcatcctgtaaatctgtgaaataccattatgagttgctaaac
tacattgatttgcctgtcttggccattcatggaaagcagaagcaaaacaagcgtacaacc
acattcttccagttctgcaatgcagattcagggatactgttgtgtacagatgtggcagcg
agagggctggacatccctgaagtcgactggattgttcagtatgaccctccagatgacccc
aaggaatatattcatcgtgtgggtagaacggccagaggcctaaatggaagaggtcatgcc
ttgcttattttgcgccctgaagaattgggcttccttcgttacttgaagcaatccaaggtt
ccattaaatgaatttgacttttcctggtcaaaaatttctgacattcagtctcagcttgaa
aaacttattgaaaagaactactttcttcataagtcagcccaggaagcgtacaagtcatac
atacgagcatacgattctcattctctgaaacagatcttcaatgttaataacctaaatttg
cctcaagttgctctgtcattcggtttcaaagtgcctccttttgttgatctgaatgtgaag
agcaatgaaggcaagctcaagaagagaggaggtggtgggggatttggctaccagaaaacc
aagaaagttgagaagtctaaaatctttaagcacattagcagaaagccttcggacagcagg
cagttctctcactga
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