Castor canadensis (American beaver): 109691881
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Entry
109691881 CDS
T04791
Symbol
Cic
Name
(RefSeq) protein capicua homolog isoform X1
KO
K20225
capicua transcriptional repressor
Organism
ccan
Castor canadensis (American beaver)
Pathway
ccan05017
Spinocerebellar ataxia
Brite
KEGG Orthology (KO) [BR:
ccan00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05017 Spinocerebellar ataxia
109691881 (Cic)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccan03000
]
109691881 (Cic)
Transcription factors [BR:
ccan03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
109691881 (Cic)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF4819
HMG_box
HMG_box_2
Zf_WRKY19
Motif
Other DBs
NCBI-GeneID:
109691881
NCBI-ProteinID:
XP_020027690
UniProt:
A0A8B7VA05
LinkDB
All DBs
Position
Unknown
AA seq
2517 aa
AA seq
DB search
MKPMKKACTGLSGSGSNNKSPPATRAKALRRRGAGEGDKPEEEDDETQPQQHPGPEEAEE
GEEEEAEQGPGVEGPPLELHPSDPAPGPAEDPKGDGEAGRWEPSLSRKTATFKSRAPKKK
YVEEHGAGSGGTGASEERERTPEEASSLGVPPRPPTSTRSSSTDTASEHSADLEDEPAEA
CGPCPWPPGGTSGSYDLRQLRSQRVLARRGDGLFLPAVVRQVRRSQDLGVQFPGDRALTF
FEGVPGGGVDVVLDATPPPGALVVGTAVCTCVEPGVAAYREGVVVEVATKPAAYKIRLSP
GPSSQPGPPGTLPQPQQPQHREPEEAVWVARSSLRLLRPPWEPETLLRKPPTGPEEEQTE
PGATLPTCPAALDPKQPEDAEVSKISFGSNLGAHCEEGEEKHPIALGTPALLPLPPPQLL
SPPPKSPAFAGPGRPGEQPSPCQEGSQGGSRSSSVASLEKGTAPATRARTPLTAAQQKYK
KGDVVCTPNGIRKKFNGKQWRRLCSRDGCMKESQRRGYCSRHLSMRTKEMEGLADSGPGG
AGRPAGVAAREGSTEFDWGDETSRDSEASSVAARGDSRPRLVAPADLSRFEFDECEAAVM
LVSLGSSRSGTPSFSPVSTQSPFSPAPSPSPSPLFGFRPANFSPINASPVIQRTAVRSRH
LSASTPKAGVLTPPDLGPHPPPPAPRERHSSGILPTFQTNLTFTVPISPGRRKTELLPHP
GALGAPGAGGGGATSDFPKSDSLDSSVDSVSHTPTPSTPASFRAVSPAVPFSRSRQSSPL
LLLPPPAGLTSDPGPSVRRVPAVQRDSPVIVRNPDVPLPSKFSGEVGTASEARAGGPGRG
CRETPVPPGVASGKTGPHPPLPAPVPITVPPAAPTAVAQPMPTFGLASSPFQPVAFHPSP
AALLPVLVPSSYTSHPAPKKEVIMGRPGTVWTNVEPRSVAVFPWHSLVPFLAPSQPDPSV
QPSEAQQPASHPVASSQSKEPAESAAVAHEQPPGGAGNADPGRPPGATCPESPGPGLPHT
LGVVEPGKGPPPTTEEEAPGPPGEPRLDSETESDHDDAFLSIMSPEMQLPLPPGKRRTQS
LSALPKERDSSSEKDGRSPNKREKDHIRRPMNAFMIFSKRHRALVHQRHPNQDNRTVSKI
LGEWWYALGPKEKQKYHDLAFQVKEAHFKAHPDWKWCNKDRKKSSSEAKPTSLGLAGGHK
ETRERSMSETGTAAAPGVSSELLSVAAQTLLSSDTKTPGSGPCGAERLHTVGGPGSARPR
AFSHSGVHSLDGGEVDSQALQELTQMVSGPTSYSGSKPSTQYGTPGPFTAPGEGGTLAAS
GRPPLLPTRASRSQRATSEDMTSDEERMVICEEEGDDDVIADDGFGTTDIDLKCKERVTD
SESGDSSGEDPEGNKGFGRKVFSPVIRSSFTHCRPTLDPEPPGPPDPPAAFGKGYGPTPS
SSSSPAATTSTSVANSYSLGSGTFKAQESSQGGTVGLLRPPHPGAGGPVTPSKATRFLPA
DPASFRRKRPESVGSLEPPGPSVIAAPPSGGGNTLQTLVVPPNKEERESSGARVPSAPAP
SLAYGAPAAPLARPAATMVTNVVRPVSSTPVPIASKPFPSSGRAEVSPNDTAGARTEMGT
GSRVPGGSPVGVSLVYSDKKSTAASSPAPHLVAGPLLGTVGKAPATVTNLLVGTPGYGTP
APPAVQFIAQGAPGSGSTAGSGAGTGSGPNGPVPLGILQPGALGKAGGITQVQYILPTLP
QQLQVAPAPAPAPGTKAAAPSGPAPTTSIRFTLPPGTCTSTNGKVLAATAPTPGIPILQS
VPSAPPPKAQSVSPVQAPPQSGSAQLLPGKVLVPLATPSMSVRGGGASQPLPLVSQPFSV
PVQNGAQPPSKIIQLTPVPVSTPSGLVPPLSPATLPGTTSQPQKVLLPSSTRITYVQSAG
GHSLPLGTSPASSQAGTVTSYGPTSSVALGFTSLGPSGPTFVQPLLSAGQTPLLAPGQVG
MSPVPSPQLPPACTAPGGPVITAFYPGSPAPTSAPLAQPSQAPPSLVYTVATSTTPPAAT
ILPKGPSASVTATPAPTSPFPSASAGSMTYSLVAPKAQRPSPKAPQKVKAAIASIPVGSF
EAGAPVRPGPAPRQPLEPGPARESTGPESELEGQLTPPVPPPPPETWPPTARSSPPPPLP
AEERTSTKVPETVASKFPSSSSDWRVPGLGLESRGEPPTPPSPAPASASGSSGGSSEGSS
GRATCDTPERKEAASTGKKVKVRPPPLKKTFDSVDNRVLSEVDFEERFAELPEFRPEEVL
PSPTLQSLATSPRAILGSYRKKRKNSTDLDSAPEDPTSPKRKMRRRSSCSSEPNTPKSAK
CEGDIFTFDRTGTEAEDVLGELEYEKVPYSSLRRTLDQRRALVMQLFQDHGFFPSAQATA
AFQARYADIFPSKVCLQLKIREVRQKIMQAATPTEQPPGAEAPLPAPPPTGTAATPAPTP
SPAGGPDPTSPGSDSGTAQAAPPLPPPPEPGPGQPGWEGTPQPSPPPSGPSTAATGR
NT seq
7554 nt
NT seq
+upstream
nt +downstream
nt
atgaagccaatgaagaaggcatgcactggcctttcgggttctggcagcaacaacaagtct
ccaccagccacaagggccaaggctctgaggcgtcgaggggctggggagggtgacaagcca
gaggaggaggatgacgagacacagccacagcagcatccaggcccagaagaggctgaagag
ggtgaggaggaagaggctgagcagggccctggggtggaggggccacccctggagctgcac
cccagtgaccctgccccaggcccagctgaggaccccaagggggacggggaggcaggtcgc
tgggagccttcacttagccgcaagacagccacattcaagtcgcgagcacccaagaagaag
tacgtggaggagcacggtgctggcagtggtggcactggagcctctgaagagcgagagcgg
acccctgaggaggccagttctttgggggtgcctccacggccacccacctccactcgctct
tcctccactgacacagccagtgagcactcagctgatctggaggatgagccagctgaggct
tgtggtccatgcccctggccccctggtggcaccagtggtagctatgacctacggcagctg
cgatcccagcgggtgctggctcggcgtggcgatggcctcttcctgcctgctgtagtgcgc
caggtgcgtcgaagccaggacctgggtgtgcagttccctggtgaccgggccttgactttc
tttgagggggtgccaggtggtggtgtggatgtggttttggatgccacgccaccaccaggt
gcattggtggtgggcacagctgtctgtacctgtgtggagcctggtgtggctgcctaccgt
gagggtgtggtggtagaggtggccactaagccagctgcgtataagatccgcctcagccct
ggccctagctcccagccaggcccaccaggcacattaccacagccccagcagccacaacac
cgtgagcccgaggaggctgtgtgggtggcccgctccagcctgcgcctgctgcggcccccc
tgggaacctgagaccctactgaggaagccccccacaggccccgaggaggagcagacagag
cctggggccaccctgcccacctgccctgctgccctggaccccaagcagcctgaggatgct
gaggtctctaaaatcagctttggaagcaacctgggggctcactgtgaggagggtgaggag
aagcacccaatagccctgggcaccccagccctgctcccactgcccccaccccagctcctg
tcaccaccccccaagtctccagcctttgctggccctggtcgccctggtgagcagccctca
ccctgccaggaggggagccagggtggcagtcggagcagcagtgtggcctccttggagaag
gggactgcaccagcaacccgggcccgtacacctttgaccgctgcccagcagaagtacaag
aagggtgacgtggtctgcacacccaatggaatccgaaagaagttcaatggcaagcagtgg
cgacgactgtgctccagagatggctgcatgaaggagtcacagcggcggggctactgttca
cgccacctgtccatgcgaaccaaggagatggagggcctggcagacagtgggccaggtggg
gccgggcgaccagctggtgtggcagcccgtgagggtagcacagaattcgactggggtgat
gagacatcgagggacagtgaggccagcagtgtggctgcccggggagactcacgcccacgc
ctggtggcccctgctgacctgtctcgctttgagttcgatgagtgtgaagcggctgtgatg
ctggtgtcactgggcagttcgcgctcaggcacgccttccttttcaccagtctcaacacag
tcgcctttctcaccagccccatcaccctcgccctcaccactctttggcttccgtcctgcc
aacttcagccccatcaatgcttcacctgtcatccagcgcactgctgttcgcagtcgccac
ctgagtgccagcacccctaaggcaggtgtgctgacaccaccagacctgggtccccaccca
ccaccacctgccccccgagagcgccattcctccggcatccttcccactttccagaccaac
ctaacctttactgtgcccatcagccccgggcggcggaagactgagctactgccccaccca
ggagcattgggggctcctggagcaggaggtggaggagccacctcagacttccccaagagt
gacagcttagactctagtgtggactcggtgtcccacacacctacaccctccacgccagct
agcttccgggctgtgtcgcccgctgtgcccttctctcgctcccgccaatcttcaccattg
ctgctgttgccccctcctgccggcctgacctcggatccagggccctccgtgcgcagggta
cctgctgtgcagcgggactcgcccgtcattgtccgcaaccctgatgtgccactgccctcc
aaattctctggagaggtgggcactgccagtgaagcgcgggctggaggacctgggcggggc
tgccgtgagaccccagtgccccctggggtggccagtgggaagactggcccacacccgcct
ctgccagcccctgtgcctatcaccgtgcctccagccgcgccgactgctgtggcccagccg
atgcccacctttggcctggcttcttcacccttccagcctgtggccttccacccctcacct
gctgccctgttgccagtccttgtgcccagcagctatactagccatcctgcccccaagaag
gaagtcatcatgggccggcctggaacagtgtggacaaatgtggaacctcgctctgtggct
gtgttcccctggcactccttagtccccttcttggcacctagccagccagacccttctgtg
cagcccagtgaggcccaacaacctgccagccacccagtggcttccagccagagcaaagaa
cctgctgagtcagcagctgttgctcatgagcagccaccaggaggggctggaaatgctgat
cctggacggccccctggagccacatgccctgaaagcccaggacctggactgccacacact
ttgggggtggtggaacctggcaaaggtcctcctcccaccactgaggaggaggcccctggt
cccccaggagagcctcggttggatagtgagacagagagtgaccatgatgatgcctttctc
tccatcatgtctcctgagatgcagttgcctctgccacctggaaaacgtaggacccagtcc
ttaagtgctctgcccaaggaacgagactcatcttcagagaaggatggaagaagccctaac
aagcgggagaaggaccacatccggcggcccatgaatgccttcatgatcttcagcaagcgg
catagggctttggtccatcagcgtcaccccaatcaggataaccggactgttagcaagatt
ctgggcgaatggtggtatgccctgggacccaaagagaagcagaagtatcacgacctggcc
ttccaggtgaaggaggcccatttcaaggcccacccagattggaagtggtgcaacaaggac
cgaaagaagtccagctcagaggccaagcccacgagcctggggctggcaggagggcacaag
gagacgcgggagcggagcatgtcggagacgggcactgccgctgcccctggggtgtcgtct
gagctcctgtccgttgcagcccagacactcttgagctctgacaccaagactccagggagt
ggtccctgtggagcagaacggctacacacagttggggggcctggctctgcccggccccga
gccttttctcacagcggtgtacacagcctggatggtggggaagtagacagccaggcacta
caagaactgactcagatggtgtctggtcccacatcgtactctggttcaaagccttccacc
cagtatggcactccaggccccttcacagctcctggtgagggaggcaccttagcagccagt
gggcgccccccactgctgcccacccgagcctctcgttcccagcgtgcaaccagtgaggac
atgaccagtgacgaggaacgcatggtcatctgtgaggaagaaggggatgatgatgtcatt
gctgatgatggttttggcaccactgacattgatctcaagtgcaaggaacgggtgactgac
agcgaaagtggggacagttctggggaggacccagaaggcaacaagggctttggccgtaag
gtgttctcacctgtgatccgctcctcttttacccactgccgtcccacactggaccctgag
ccaccagggcccccggatccacctgcagcctttggcaaaggctatggtcccaccccatcc
tcttcctcctcacctgctgccaccacctcaacctcagtagctaactcctactcattgggc
tctggaaccttcaaggcccaggagtctagtcagggtggcacagttggcctactacggccc
ccacatcctggggctgggggcccagtgacaccttccaaggctactcggtttctcccagcg
gatcctgcctccttccgtcgcaagagacctgaaagtgttggcagtctggagccaccaggc
ccgtcagtcattgcagcgcctcccagtgggggaggaaacactctgcagacattggtggtg
cccccaaacaaggaggagagggagagcagtggagcccgagtgccctcagccccagcccca
tcactggcttatggggccccagcagctcccctggcccgccctgctgccaccatggtcaca
aatgtggtgcggcctgtcagcagtactcctgtgcccattgcctctaagcccttccccagc
tctggccgggctgaggtatctccaaatgacacagcaggtgccaggactgaaatgggcact
gggtctcgggtgcctgggggctccccagtgggggtcagcttagtgtattcggacaagaag
tctacagcagcctcttcaccagccccgcatttggtggctgggcccctattgggcactgta
gggaaggcccctgccactgtcaccaacctgctggtgggcaccccaggctatgggactcct
gcaccccctgctgttcagttcattgcccagggagcccctggcagtgggagcactgccggt
tcaggagcaggtactgggagtggccccaatgggccagtacccctgggcattttacaacca
ggtgccctgggcaaggcagggggaatcacccaggtgcagtacatcctgcccacgctgccc
cagcagcttcaagtggcccctgcacccgcaccagccccgggaaccaaggcagcagctccc
agtggccctgcacccaccaccagcatccgttttactctcccaccgggcacctgcacctcc
accaacggcaaggtcctggccgccactgcacccactcctggcatccctatcttgcagtct
gtaccctccgccccaccccctaaagcgcagtcagtttctcctgtgcaggccccgccccaa
agtggctcagcccagctgctgcctgggaaggtactagtgcccttggccacccctagcatg
tcagtgcggggtgggggggccagccagccactgcctctggtgagccagcctttctcagta
cctgtgcagaatggtgcccagccacccagcaagatcatccagctgactcctgtgcctgtg
agcacacctagcggcctggtgccgcccctgagcccagccacactccctggaaccacctcc
cagccccagaaggtcctgctgccctcctctaccagaatcacctatgtgcagtcagctggc
gggcactctttgcctctgggcaccagccctgcatccagccaggctggaacggttacctcg
tatgggcccacaagctccgtagctctaggcttcacctcgctgggacccagtggccccacc
ttcgtgcagcccctgctgtcagcaggccaaaccccactcctggctcctggccaagtgggc
atgtcgcctgtgcctagtccccagctgcctcctgcctgtacagcccctggaggtcctgtg
ataacggcgttttaccctggcagccctgcacccacctcagcaccgctagcccagccatcc
caggcacccccaagcctggtctacactgtggccaccagcaccacccctcctgctgccacc
attctgcccaagggcccatcagcctctgttactgccaccccagcccctactagtcctttt
cctagtgcctcagcaggctctatgacctacagcttagtggctcccaaggcccagcggcct
agccccaaggccccccagaaagtaaaggcggccattgccagcattcctgtgggctccttt
gaggcaggtgccccggtgcggcctggccctgcaccccggcagcctctggagcctggccca
gctcgagagtcaactggccctgagtctgagcttgaggggcagctcacaccaccagtccct
ccaccaccaccagagacctggcctcccactgcccggagcagcccaccaccacccctgcct
gctgaggagcggaccagcaccaaggtccctgagactgtggccagcaaattccccagctca
tcttcagattggcgtgtccctgggctgggcctggagtctcgtggggagcctcccactcct
cctagcccagctccagcttcagccagtggcagcagtggtggcagcagtgagggcagcagt
gggagggcaacctgtgacacacctgagcgcaaagaagcggctagtaccggcaagaaggtg
aaggtgcggcccccgcccttgaagaagacctttgactctgtggacaacagggtcctgtca
gaggtagacttcgaagagcgctttgctgagcttcctgagtttcggccagaagaggtgctg
ccctcgcccacactgcagtctctggccacctcaccccgggccatcctgggctcttaccgc
aagaagaggaagaactccaccgacctggactcagctcctgaggaccccacctcacccaag
cgcaagatgagaagacgctccagctgcagctcggagcccaacacccccaagagtgccaag
tgcgaaggggacatcttcacctttgaccgcacaggtaccgaagctgaggatgtattaggg
gagctggagtatgaaaaggtgccctactcttcgctgcggcgtaccctggaccagcgccgg
gctctggtcatgcagctcttccaggaccatggcttcttcccatcagcccaggccacagca
gctttccaggcccgctatgcagacatcttcccatccaaggtttgtctgcagttaaagatc
cgtgaggtgcgccagaagatcatgcaggcagccactcccacggagcagccccctggagct
gaggcccccctccctgcaccacccccgactggcaccgctgctactcctgcccccactccc
agccctgctgggggccctgaccccacctcacctggttcggactctggcactgcccaggct
gccccaccactgcctccacccccagagccagggccgggacagcctggttgggaggggacc
ccccagccctcccccccaccctcaggcccctccacagctgccacaggcaggtga
DBGET
integrated database retrieval system
