Castor canadensis (American beaver): 109692026
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Entry
109692026 CDS
T04791
Symbol
Pms1
Name
(RefSeq) PMS1 protein homolog 1 isoform X1
KO
K10864
DNA mismatch repair protein PMS1
Organism
ccan
Castor canadensis (American beaver)
Brite
KEGG Orthology (KO) [BR:
ccan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ccan03400
]
109692026 (Pms1)
DNA repair and recombination proteins [BR:
ccan03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
109692026 (Pms1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_mis_repair
HMG_box
HATPase_c_3
HMG_box_2
HATPase_c
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
109692026
NCBI-ProteinID:
XP_020027985
UniProt:
A0A250Y5V5
LinkDB
All DBs
Position
Unknown
AA seq
925 aa
AA seq
DB search
MKQLPAATVRLLSSSQIITSVVSVVKELIENSLDAGATSIDVKLENYGFDKIEVRDNGEG
IKAADAPVMAVKYYTSKINSHEDLENLTTYGFRGEALGSICCVAEVLITTRTAVDNFSTQ
YILDGSGHILSQKPSHLGQGTTVTALKLFKNLPVRKQFYSTAKKCKDEIKKIQDLLVSYG
ILKPELRIVFIHNKAVIWQKSRVSDHKMALMSVLGTAVMGNMESFQYHSEESQIYLSGFF
PKQDADRSSTSLSTPERSFIFINSRPVHQKDVLKLIRHYYNLKCLKESTRLYPIFFLKID
VPTADVDVNLTPDKSQVLLQNKESVLIALENLMTTCYGPLPSTNSYENNETDVSSADMVV
SKTAETDVLFNKIESSGNNCPNVDTAAIPSQNVVHNDESRNNINHYLNYEINISDHCDDN
FSSENSNINKDTILMNNLSWDGAQSEYSKTCFVGSTKHTELESVSKGLVDEGGGNNEEAA
SERSLEICADDWSKGDVLNSVGESAEPVKIVVPQKGLACKVSNNNHPGLEQKNLSGGFCS
KKSNVIDNKSGQLTAYDLISSRIIKKPLSASALFIQDHRAQFLAENPKTSLEDATGQIEE
LWKTLSEEKKLKYEEKATKDLERYNTQMKKAIEQESQKSLKDDRKKIKPTSTWSLVQKHK
LKTSLSNQPKLDELFQSQTEKKRSKNIKTVEIPFSMENLKINFDKQKKLDLQDKNELCLV
HNLRFPDAWLITSKTEVMLLNPYRVEEALLFKRLLENHKLPAEPLEKPIILTESLFNGSH
YLEALYKMTTDDQRYSGSIYLSDPRLTANGFKIKLIPGASITENYLEIEGMADCLPFYGV
MDLKEILNAILNKNAKEVYECRPRKVISYLEGEAVRLSRQLPMYLPKEDIQNIIYRMKNQ
FGNEIKGCVHGRPFFHHLTYLPETQ
NT seq
2778 nt
NT seq
+upstream
nt +downstream
nt
atgaaacagttgcctgcagcaacagttcgcctcctttcaagttctcagatcatcacttca
gtggtcagtgttgtaaaagagctcattgagaactccttggatgccggtgccacaagcata
gatgttaaactggagaactatggatttgataaaattgaagttcgagacaatggtgagggg
atcaaggctgctgatgcacctgtaatggcagtgaagtactatacctcaaagataaacagt
catgaagatcttgaaaacctgacaacctatggttttcgtggggaagctttggggtcgatt
tgttgtgtggcagaggttttaataacaacaaggacagctgttgataattttagcacccag
tatattttagatggcagtggccacatactttctcaaaaaccttcacatcttggtcaaggt
acaactgtaactgctttaaagctatttaagaatctacctgtaagaaagcaattttactca
actgcgaaaaaatgtaaagatgaaataaaaaagattcaggatctcctcgtaagctatggc
atccttaaacctgagttaaggattgtttttatacataataaggcagttatttggcaaaaa
agtagagtatcagaccacaagatggctctcatgtcagttctggggactgctgttatgggc
aacatggaatcctttcagtaccactctgaggaatctcagatttatctaagtggatttttt
ccaaaacaagatgcagaccgcagttccacaagtctttcaacaccagagagaagtttcatc
tttataaatagtcgaccagtacatcaaaaagatgtattaaagttaatccgacattattac
aatctgaagtgtctaaaggaatctactcgtttgtatcccattttctttctgaaaatagat
gttcctacagctgatgtggatgtaaatttaacaccagataaaagtcaagtattattacag
aataaggaatctgttttaattgctcttgaaaatctgatgacgacttgttatggaccacta
cctagtacaaattcttatgaaaataatgaaacagatgtttcctcagctgacatggttgtt
agtaaaacagcagaaacagatgtgctttttaataaaatagaatcatctggaaataattgt
ccaaatgttgatactgcagctattccttcccaaaatgttgtacataatgatgaatctaga
aataacattaatcactatttaaattacgagataaatattagtgaccattgtgatgataat
tttagtagtgaaaattctaacattaataaggacacaatcctaatgaataatttatcatgg
gacggtgcccagagtgaatatagtaaaacttgttttgtaggttctactaagcatactgaa
ttagaaagtgtcagtaaaggcctcgtagatgaaggtgggggaaataatgaagaagcggct
tctgagaggtctttggaaatttgtgcagatgactggagcaagggagatgtacttaattca
gtgggagagagtgctgaacctgtgaaaattgtagtgcctcaaaaaggtttagcatgcaaa
gttagtaataacaaccatccaggccttgagcaaaagaatctcagtggtggtttttgtagt
aaaaaatcaaatgtaatagataacaaatcaggacagcttacagcctatgatttaattagc
agtcgaataatcaagaaacccttgtcagcaagtgccctttttatccaagatcatcgtgct
cagtttctcgcagaaaatcctaagactagtttggaggatgcaacaggacaaattgaagaa
ctgtggaagacattgagtgaagagaaaaagctgaaatatgaagaaaaggctactaaagat
ttggaacgatacaatactcaaatgaagaaagccattgaacaggagtcacaaaaatcattg
aaagatgacaggaaaaagataaaacctaccagcacatggagtttggtgcagaaacacaag
ttgaaaacctcattatctaatcagccaaaacttgatgagctctttcagtcccaaactgaa
aaaaaaagaagcaaaaatattaaaacagtagagatcccgttttctatggaaaacttaaag
ataaattttgataaacaaaagaaattggacttacaagataagaatgaactttgtttggtt
cataatcttaggtttcctgatgcatggctaattacatccaaaacagaggtaatgttacta
aatccatatagagtagaagaagccctgctctttaagagacttcttgagaaccataaactc
cctgctgagccactggaaaagccaattatattaacagaaagtctttttaatggatctcat
tatttagaggctttatataaaatgacaacagatgaccaaagatacagtggatcaatttac
ctgtctgatcctcgtcttacagcaaatggcttcaagataaaattgataccaggagcttcc
attactgaaaactacttggaaatagaaggaatggctgattgcctcccattctatggcgta
atggatttaaaagaaatccttaatgctatattaaacaaaaatgcaaaggaagtttatgaa
tgtagacctcgcaaagtgataagttatttagagggagaagctgtgcgtctgtctagacaa
ctgcctatgtacttaccgaaagaggacatccaaaatattatctacagaatgaagaaccag
tttggaaatgaaattaaagggtgtgttcatggtcgcccattttttcatcatttaacctat
cttccagaaactcagtga
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