Castor canadensis (American beaver): 109692154
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Entry
109692154 CDS
T04791
Symbol
Smc6
Name
(RefSeq) structural maintenance of chromosomes protein 6 isoform X1
KO
K22804
structural maintenance of chromosomes protein 6
Organism
ccan
Castor canadensis (American beaver)
Brite
KEGG Orthology (KO) [BR:
ccan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ccan03400
]
109692154 (Smc6)
DNA repair and recombination proteins [BR:
ccan03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
SMC5-SMC6 complex
109692154 (Smc6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_23
SMC_N
AAA_29
DUF3993
AAA_21
Motif
Other DBs
NCBI-GeneID:
109692154
NCBI-ProteinID:
XP_020028188
UniProt:
A0A250Y6V4
LinkDB
All DBs
Position
Unknown
AA seq
1097 aa
AA seq
DB search
MAKRKEDNFFSPENAKRPRQELLEDFDKDGDEDECAVSFTNGTCTLTAAEVGIIESIQLR
NFMCHSMLGPFKFGSNVNFVVGNNGSGKSAVLTALIVGLGGKAIATNRGSSLKGFVKDGQ
SSADISITLRNRGDDAYRANVYGDSIVVQQHISMDGSRSYKLKSETGTVVSTRKEELIAI
LDHFNIQVDNPVSVLTQEMSKQFLQSKNEGDKYKFFMKATQLEQMKEDYSYIMETKERTK
EQINQGEERLIELKRQCLEKEERFQSIAGLSTMKTNLEYLKHEMAWAVVNEIEKQLNAIR
DNIKIGEDRAARLDRKMEEQQVRLNDAENKYKDIQDKLEKIIQETNARAPECLALKVDLT
AKKKTYNEAEVLYNRSLNEYKALKKDDEQLCKRIEELKKSTDQSLEPERLERQKKICWLK
ERVKSLQDQENSVNEEIEQFQQAIEKYKEEYARIKREELDVKHVLNYNQRQLKELKDSRT
DRIKRFGPHVPALLEAIDDAYRRGYFTHKPVGPLGACIHLRDPELALAIESCLKGLLQAY
CCHNHADERVLQALMKRFYPPGTSRPQIIVSEFRSEMYDVRHRAAHHPEYPTVLTALEID
NAVVANSLIDMRSIETVLLIKNNSVARAVMQSQKPPKNCREAFTADGDQVFAGRYYSSEN
TRPKFLSRDVDSEISDLENEVENKKAQILNLQQHLSALDKDIKHNEDLLKRCQLHYKELK
MKIRKNISEIRELENIEEHQSVDIATLEDEAEENKIKMKMVEKNMEHQKENMEHLKSLKI
EAENKYDAMKLKINQLSELADPLKDELNLADSEVDNQKRGKRHYEEKQKEHLNTLNKKKR
ELDMKEKELEEKMSQARQICPERIEVKKSASILDKEINRLRQKIQAEHASHGDREEIMRQ
YQEARESYLDLDNKVRTLRRFIKLLEEIMTHRYKTYQQFRRCLTLRCKLYFDNLLSQRAY
CGKMNFDHKSETLSISVQPGEGNKASFNDMRALSGGERSFSTVCFILSLWSIAESPFRCL
DEFDVYMDMVNRRIAMDMILKMADSQRFRQFILLTPQSMSSLPSSKLIRILRMSDPERGQ
TTLPFQPVTQEEDDDRS
NT seq
3294 nt
NT seq
+upstream
nt +downstream
nt
atggccaaaagaaaggaagacaatttcttctctcctgaaaatgccaaaagaccaagacaa
gaattattagaggattttgataaagatggtgatgaagatgaatgtgcagtttctttcact
aatggtacctgtactttgactgcagcagaagttggaataattgagagtattcagctaaga
aacttcatgtgccattcaatgcttggacctttcaaatttggttctaatgtcaattttgtt
gttggcaacaatggaagtgggaagagtgcagtactcacagctctcatagttggtcttggt
ggaaaagcaattgctactaatagaggatcctctttaaaaggttttgtgaaagatggacag
agctcagcagatatctcaataacattacggaacagaggagatgatgcctatagagcaaac
gtgtatggtgactccatagttgtacagcaacatatcagcatggatggaagtcgatcttac
aaactcaaaagtgaaacaggcactgtggtttctaccaggaaggaagagctgattgcaatt
cttgatcactttaatatccaggtcgataatccggtttctgttttaacacaagagatgagc
aaacagttcttgcagtctaaaaatgagggagacaaatacaaattcttcatgaaagcaacc
caacttgaacagatgaaggaagattattcatacattatggaaacaaaagaaagaacaaag
gagcagataaatcaaggagaagagcgacttattgaactaaaacgccagtgtttggagaaa
gaggaacgttttcaaagtattgctggtttaagtacaatgaagactaatttagagtatttg
aagcatgagatggcttgggcagtggtcaatgaaattgagaaacaactgaatgctatcaga
gataatatcaaaatcggagaagatcgtgctgctagacttgacaggaaaatggaagaacaa
caggtcagacttaatgatgcagaaaacaaatacaaagacattcaagataagctagaaaag
attattcaagagacaaatgcacgagcaccagaatgtttggcattgaaagtagatctcact
gcaaagaaaaagacctataatgaagctgaggttttatataaccgctccctaaatgagtac
aaagcattaaagaaagatgatgagcagctttgtaaaagaattgaagaactaaagaaaagt
actgatcaatctttggaacctgagcggttggaaagacaaaaaaaaatatgttggttgaaa
gagagagtaaagtccttacaggatcaggaaaattcagtcaatgaagaaattgaacagttt
cagcaagccatagaaaagtacaaagaagaatatgccagaattaagagagaagaattagat
gtgaagcatgtactgaactataatcagagacaacttaaagaattgaaagatagtagaact
gatcgaataaaaagatttgggcctcatgttccagctcttctggaagcaatagatgatgcc
tacagacggggatattttacccataagcctgtaggccctttaggagcttgcattcatctc
cgagaccccgaacttgctttggctattgaatcttgcttaaaaggacttctacaagcctat
tgttgccataatcatgctgatgaaagagtacttcaggcactgatgaaaaggttttatcca
ccagggacctctaggccacagataatagtttctgaatttcggagtgagatgtatgatgta
agacacagagctgctcaccatccagagtaccccacagttctgacagctttagaaatcgat
aatgcagttgttgcaaatagcctgatcgacatgaggagcatagagacggtgctgctgatc
aaaaataattctgtagctcgtgcagtaatgcagtcccaaaagccacctaaaaattgtaga
gaagcttttactgctgatggtgatcaagtttttgcaggacgttattattcatctgaaaat
acaagacctaagttcctaagcagagatgtggattctgaaataagtgatctggagaatgaa
gttgaaaataagaaggctcagatactaaatcttcagcagcatttgtctgcccttgacaag
gatattaagcacaacgaagaccttcttaaaaggtgtcaactacattataaagaattaaag
atgaaaattagaaaaaatatttctgaaattcgggaacttgagaatatagaagaacaccag
tctgtagatattgcaactttggaagatgaagctgaagaaaataaaatcaaaatgaaaatg
gttgagaaaaatatggagcaccaaaaagaaaacatggagcatcttaaaagtctgaaaata
gaagcagaaaacaagtatgatgcaatgaaattaaaaattaatcagctgtcagagctggca
gatccgcttaaggatgaattaaaccttgctgattctgaagtggataaccaaaaacgaggg
aagcggcattatgaagaaaaacagaaggaacacttgaataccttaaataaaaagaaacga
gaactagacatgaaagaaaaggagctagaggagaaaatgtcacaagcacgacagatctgt
ccagagcggatagaagtaaagaaatctgcatcaattctagataaagaaattaatcgatta
agacaaaagatacaggcagaacatgctagtcatggagatcgagaggaaataatgaggcag
taccaggaagcaagagaatcatatcttgatcttgataacaaagtaaggactttaagaagg
tttattaaattactagaagaaataatgacccataggtacaagacatatcaacaatttaga
aggtgtttgacgttacgatgcaaattatattttgacaacttactatctcagagggcctat
tgtggaaaaatgaattttgaccacaagagtgaaactcttagcatatcagttcagcctggc
gagggaaacaaagcttccttcaatgacatgcgagccttgtctggcggtgagcgttctttc
tccacggtgtgcttcatcctttccctgtggtccattgctgaatcacctttcagatgccta
gatgaatttgatgtctacatggatatggtcaataggagaattgcaatggacatgatactt
aagatggcagattcccagcgttttagacaatttatcttgcttacccctcaaagtatgagc
tcacttccttcaagtaaattgattagaattcttcggatgtctgatcctgaaagaggacaa
accacattgcctttccaacctgtgactcaagaggaagatgatgaccgaagttga
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