Castor canadensis (American beaver): 109692328
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Entry
109692328 CDS
T04791
Symbol
Cilp
Name
(RefSeq) LOW QUALITY PROTEIN: cartilage intermediate layer protein 1
KO
K24436
cartilage intermediate layer protein
Organism
ccan
Castor canadensis (American beaver)
Brite
KEGG Orthology (KO) [BR:
ccan00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ccan04990
]
109692328 (Cilp)
Domain-containing proteins not elsewhere classified [BR:
ccan04990
]
Thrombospondin domain-containing proteins
Other thrombospondin domain-containing proteins
109692328 (Cilp)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CILP_C
CILP_8th
CILP
CILP_5th
Mucin2_WxxW
Ig_3
I-set
TSP_1
Ig_2
CarboxypepD_reg
ig
CarbopepD_reg_2
TSP1_CFP_C
TSP1_spondin
Motif
Other DBs
NCBI-GeneID:
109692328
NCBI-ProteinID:
XP_020028461
UniProt:
A0A8B7V924
LinkDB
All DBs
Position
Unknown
AA seq
1184 aa
AA seq
DB search
MMGTKAWAFSFLVLEVTSVLGRHTMLTQSVRRVQPGKRIPGTFAKPADPLESPGEWTAWF
NIDHPGGQGDYERLDAIRFYYGDRVCARPLRLEARTTDWMPAGSTGQVVHGSPHEGFWCL
NREQQPGQNCSNYTVRFLCPPGSLRRDTEHIWSPWSPWSKCSAACGHTGVQTRTRTCLAE
TVSLCSEATEEGQLCVSQPCTACDLTCPMGQVNADCDTCMCQDFMLHGAISLPGGAPASG
AIVYLMTKTPKMLTQTDSNGRFHVPGLCPDGKTTLKIMKTKFAPIMLTMPKTSLKTATIN
AEFVRADMPYIIMNPETKARRAGQTVSLCCKATGKPSPDKYFWYHNDTLLDPSLYKHESK
LVLRNLKQDQAGDYFCKAQSDAGAAKSQVAQLTVIAPYETPCNPTPESYLIRLPHDCFQN
ATNSFYYDVGRCPVKTCAGQQDNGVRCRDAVENCCGISKTEEREIQCSGYTLPTKVATEC
SCQRCAETRSIVRGRVSAADDGEPMRFGHVYMGNSRVSMTGYKGTFSLHVPQDTERLVLT
FVDRLQKFVNTTKVLPFNRKGSAVFHEIKMLRRKEPITLEAMETNIIPLGEVVGEDPVAE
LEIPSNSFYRQNGEPYTGKVKASVTFXDPRNISTATAAQSDLNFINDEGDTLPLRTYGMF
SVDFTDDASSEPLNAGKVKVHLDSTQVKMPEHIPTMKLWSLNPDTGLWEEEGDFKFESQK
RNKREERTFLVGNMEIRERRLFNLDVPESRRCFVKVRAYRSERFLPSEQIQGVVVSVINL
EPRTGFASNPRAWGRFDSVITGPNGACLPAFCDDQSPDAYSAYFLASLAGEELEAVESSP
KFNPNAIGVPQPYLNKLKYRRTDHEDPRVKKMAFQITMAKPRPNSAEESNGPIYSFENLR
ACEEAPPSAAHFRFYQIEGDRYDYNTVPFNEDDPMSWTEDYLAWWPKPMEFRACYIKVKI
VGPLEVNVRSRNMGGTHRQTVGKLYGIRDVKSTRDRDQPNVSSACLEFKCSGMLYDQDRV
DRTLVKVIPQGSCRRASVNPMLHEYLVNHLPLAVNNDTSEYTMLAPLDPLGHNYGIYTVT
DQDPRIAKEIALGRCFDGTSDGSSRIMKSNVGVALTFNCVERQVGRQSAFQYLQSTTVRS
PAAGTVQGRVPSRRQQRARRGGQRGRGGVASLRFPGVAQQPLSN
NT seq
3555 nt
NT seq
+upstream
nt +downstream
nt
atgatggggaccaaagcctgggcgttctccttcctggttctggaagtcacctctgtgttg
gggaggcatacgatgctcacccaatcggtgagaagagtccagcctgggaagaggatacct
ggcacctttgccaagcctgctgaccccctggagagtcctggtgagtggacagcatggttc
aacattgaccacccaggcgggcagggcgactatgagcggctggatgccattcgcttctac
tacggggatcgtgtgtgtgctcgtccccttcgtctagaggcccggaccactgactggatg
cccgcaggcagcactggccaggtggtccatggcagtccccatgagggcttctggtgcctc
aacagggagcagcagcctggccagaactgctccaattacaccgtgcgcttcctctgccca
ccagggtctctgcgcagagacacagagcacatctggagtccctggtccccctggagcaag
tgttcagctgcttgtggtcacactggggtccagacccgcacacgcacctgcttggcagag
actgtgtcactgtgcagtgaggctactgaggagggccagctctgtgtgagccagccctgc
acagcctgtgacctgacctgccccatgggccaggtaaatgctgactgtgacacatgtatg
tgccaggacttcatgcttcatggggccatctccctccctgggggtgcccctgcttcaggg
gccatcgtctacctgatgaccaagacacctaagatgctgacccagacagacagcaatggg
aggttccacgtccctggcttgtgccctgatggcaaaactaccttgaagatcatgaagacc
aagtttgcccccatcatgctcacaatgcccaaaactagcctgaagacagccaccatcaat
gcagaatttgtgagggcagacatgccatacatcataatgaaccccgagacaaaagcccgg
agagctggtcagactgtgtccctgtgctgcaaggccacagggaagcccagtccagacaag
tatttctggtaccacaatgacacattgctggatccctccctttataagcacgagagcaag
ctggtgctgaggaacctgaagcaagaccaggctggggactacttttgcaaggcacagagt
gacgctggggctgcaaagtcccaggttgcgcagctgactgtcatagcaccctatgagact
ccttgcaacccaactcctgagagttaccttatccgactgccccacgattgctttcagaat
gccaccaattccttctactatgatgtgggccgctgccctgtcaagacctgtgcaggacag
caggataatggggtcaggtgccgggatgctgtggagaactgttgtggcatctccaagaca
gaagagagggagatccagtgcagtgggtacacgctgcccaccaaggtggccacggagtgc
agctgccagcggtgtgcagagacacggagcatcgtgcgtggccgcgtcagtgccgctgat
gatggggaacccatgcgctttggccacgtgtacatggggaacagccgcgtgagcatgact
ggctacaaaggcactttcagcctccatgtcccccaggacactgagaggctggtgctcaca
ttcgtggacaggctgcagaagtttgtgaacaccaccaaagtgttgccattcaacaggaag
gggagtgcagtgttccacgagatcaagatgctacgacgcaaagagcccatcaccctggaa
gccatggagaccaacattatccccctgggagaggtggtcggcgaagaccctgtggctgaa
ctggagatcccatctaacagtttctacaggcagaatggggagccctacacaggaaaggtg
aaggccagcgtgactttcnctgacccccggaatatttccacggccactgctgcccagagc
gatctgaacttcatcaatgatgaaggagataccctcccccttcggacatatggcatgttc
tctgtggacttcacagatgacgccagctcagaaccacttaatgctggcaaggtgaaggtc
caccttgattcgacccaggtcaagatgccagagcatatacccacgatgaaactctggtca
ctcaacccagacacagggctgtgggaggaggaaggggatttcaaatttgaaagtcaaaag
aggaacaaaagggaagagagaaccttcctggtgggcaacatggagatccgtgagagaagg
ctctttaacctggatgtccctgaaagcagaaggtgctttgtcaaggtgagggcctaccgg
agtgagaggttcttgcccagtgaacaaatccagggggttgtggtctctgtgatcaacctg
gagcccagaactggctttgcatccaaccctagggcctggggccgctttgacagtgtcatc
acaggccccaatggggcttgtctgcctgccttctgtgatgaccagtcccctgatgcctat
tctgcctacttcttggcaagcctggctggggaggaactggaggcagtggagtcttcccct
aaattcaacccaaatgcgattggtgtccctcagccctacctcaacaagctcaagtaccgt
aggacagaccacgaggacccacgggttaaaaagatggcattccagatcaccatggccaag
ccaaggcccaactcagctgaggagagcaatgggcccatctactcctttgagaacctccgg
gcttgtgaagaggcaccacccagtgcggcccacttccggttctaccagattgagggggat
aggtatgactataacacagttcccttcaacgaagatgaccccatgagctggactgaagac
tacctggcatggtggcccaagccaatggagttcagggcctgctacatcaaagtgaagatc
gtgggtccattggaggtgaatgtccgatcccgcaacatggggggcacccaccgacagaca
gtggggaagctgtatggaatccgggatgtgaagagtactcgggacagggaccagcccaat
gtctcatctgcctgtctggagttcaagtgcagtgggatgctctatgaccaggaccgcgtg
gaccgcacactggtgaaggtcatcccccaaggcagctgccgccgagccagcgtgaacccc
atgctacatgagtacctggtcaaccacctaccactagcagtcaacaacgacaccagtgag
tacaccatgttagcacccctggacccactgggtcacaactatggcatttatactgtcact
gaccaggaccctcgcatagccaaggagattgcacttggccggtgctttgatggcacgtcc
gacgggtcctccagaatcatgaagagcaacgtgggagtagccctcacctttaactgtgta
gagaggcaggtgggccgccagagcgccttccaatacctccaaagcaccacagtccggtcc
ccagctgcaggcactgttcaaggaagagtgccctccagaaggcagcaacgggcaaggagg
ggtggccagcgtgggcgtggaggagtggcctccctgagatttcctggagttgctcaacag
cctctgagcaactaa
DBGET
integrated database retrieval system
