Castor canadensis (American beaver): 109692348
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Entry
109692348 CDS
T04791
Symbol
Ddx46
Name
(RefSeq) probable ATP-dependent RNA helicase DDX46 isoform X1
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
ccan
Castor canadensis (American beaver)
Pathway
ccan03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ccan00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109692348 (Ddx46)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ccan03041
]
109692348 (Ddx46)
Enzymes [BR:
ccan01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
109692348 (Ddx46)
Spliceosome [BR:
ccan03041
]
Complex A
U2 snRNP components
U2 related factors
109692348 (Ddx46)
Complex B
109692348 (Ddx46)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
CdAMP_rec
Motif
Other DBs
NCBI-GeneID:
109692348
NCBI-ProteinID:
XP_020028490
UniProt:
A0A8B7VCH6
LinkDB
All DBs
Position
Unknown
AA seq
1055 aa
AA seq
DB search
MGRESRHYRKRSASRGRSGSRSRSRSPSDKRSKRGDDRRSRSRDRDRRRERSRSRDKRRS
RSRDRKRLRRSRSRERDRSRERRRSRSRDRRRSRSRSRGRRSRSSSPGNKSKKTENRSRS
KEKTEGGESSKEKKKDKDDKEDEKEKDAGNFDQNKLEEEMRKRKERVEKWREEQRKKAME
NIGELKKEIEEMKQGKKWSLEDDDDDEDDPAEAEKEGNEMEGEELDPLDAYMEEVKEEVK
KFNMRSVKGGGGNEKKSGPTVTKVVTVVTTKKAVADSDKKKGELMENDQDAMEYSSEEEE
VDLQTALTGYQTKQRKLLEPVDHGKIEYEPFRKNFYVEVPELAKMSQEEVNVFRLEMEGI
TVKGKGCPKPIKSWVQCGISMKILNSLKKHGYEKPTPIQTQAIPAIMSGRDLIGIAKTGS
GKTIAFLLPMFRHIMDQRSLEEGEGPIAVIMTPTRELALQITKECKKFSKTLGLRVVCVY
GGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGPSRFIELGFRDLNHQRFFRPYDGRV
TNLRRVTYVVLDEADRMFDMGFEPQVMRIVDNVRPDRQTVMFSATFPRAMEALARRILSK
PIEVQVGGRSVVCSDVEQQVIVIEEEKKFLKLLELLGHYQESGSVIIFVDKQEHADGLLK
DLMRASYPCMSLHGGIDQYDRDSIINDFKNGTCKLLVATSVAARGLDVKHLILVVNYSCP
NHYEDYVHRAGRTGRAGNKGYAYTFITEDQARYAGDIIKALELSGTAVPPDLEKLWSDFK
DQQKAEGKIIKKSSGFSGKGFKFDETEQALANERKKLQKAALGLQDSDDEDAAVDIDEQI
ESMFNSKKRVKDMAAPGTSSVPAPTAGNAEKLEIAKRLALRINAQKNLGIESQVDVMQQA
TNAILRGGTILAPTVSAKTIAEQLAEKINAKLNYVPLEKQEEERQDGGQNESFKRYEEEL
EINDFPQTARWKVTSKEALQRISEYSEAAITIRGTYFPPGKEPKEGERKIYLAIESANEL
AVQKAKAEITRLIKEELIRLQNSYQPTNKGRYKVL
NT seq
3168 nt
NT seq
+upstream
nt +downstream
nt
atgggccgggagtcgcgccactatcggaaacgatcagcatcccgaggacgctctggaagt
cgatctagaagtcgctcaccctcagacaaaagaagcaaacgtggagatgacaggcgatct
agaagcagagatagagatagaaggagagagaggtctcggagcagggataaaagaagatct
cgttcaagggacagaaaacgcctaaggcgttccagaagtagagagagagacagaagtcga
gagcgaagaagatctcgaagccgagacaggaggcgctcaaggagtagaagccggggccgg
cgatcccgctcttccagtcctggcaataaaagcaagaaaactgagaataggtctaggtcc
aaagagaaaacagaaggtggggaaagttctaaagagaagaaaaaagacaaagatgacaaa
gaggatgagaaagaaaaagatgctggtaactttgaccagaataagctggaggaagaaatg
agaaagcgaaaagaaagagttgaaaaatggcgagaagagcagcgtaaaaaggcaatggaa
aacataggggagctgaaaaaggaaattgaagagatgaaacaaggaaaaaagtggagttta
gaagatgatgatgatgatgaagatgatcctgcagaggctgaaaaggaaggaaatgagatg
gagggtgaggagctagatccattggatgcttacatggaagaagtaaaagaagaagtaaaa
aagtttaacatgagaagtgtaaaaggtggtggggggaatgaaaagaagtctgggccaacg
gtcacaaaagttgtcactgttgtaacaactaaaaaagcagtcgcggattctgataagaag
aagggtgagctgatggagaatgaccaggatgccatggagtattcttcagaagaggaagaa
gttgatcttcaaacggcccttacaggctatcagacaaaacagagaaaacttcttgaacca
gttgatcatggaaaaattgaatatgaaccattcagaaaaaacttttatgttgaagttcca
gagctagcaaagatgtctcaagaggaggtgaatgtatttcgattggaaatggaaggcatt
acagttaaaggaaaaggttgccccaaaccaattaaatcttgggtccagtgtggaatttcc
atgaagatcttaaattccctcaaaaagcatggctatgagaagcctacgccaatccaaacc
caagcgattcctgccataatgtctggacgtgatttgattggcattgccaagacaggaagt
ggaaagaccattgcttttctattgcccatgtttaggcacatcatggatcagaggtcatta
gaagaaggagaggggccaatagctgtcatcatgactccaactcgagaactggctttacaa
attactaaagagtgtaagaagttttcaaagaccttgggacttagagtggtctgtgtttat
ggaggaacaggaatcagtgaacagattgctgagttgaaaagaggtgctgaaattattgtt
tgcacacctggtcgaatgattgacatgttagcagcaaacagtggcccttcaagatttata
gaactgggcttccgagacttaaaccatcaaaggttcttcaggccctatgatggtcgggtg
acaaatcttcgaagagtgacatatgttgttttagatgaagcagatagaatgtttgacatg
ggttttgaaccacaggtcatgcgcattgtggataatgttcgtcctgatcgacagactgtt
atgttttcagctaccttccccagagctatggaggctttggctcgcagaattctgagtaaa
cccattgaagtacaagttggaggcaggagtgtggtttgctcagacgtggagcagcaagtg
attgtgattgaagaagaaaagaaattcttgaagttactcgagcttctaggccattatcag
gaatcgggatctgtcattatatttgtggataagcaagaacatgctgatggtcttctgaag
gatttaatgagggcgtcttatccttgcatgtctcttcatggaggtattgatcaatatgac
agagatagcatcataaatgactttaagaatggaacctgcaaacttctcgtggccacatct
gtcgccgcccgaggtctagacgtgaaacatctgattcttgtagtaaattacagctgcccc
aaccattatgaggactatgtgcacagagcagggcggactgggagagcaggcaacaagggt
tatgcctatacttttatcaccgaagaccaagctcgctatgctggtgacataattaaagct
cttgaattgtcagggactgcagtgcctcctgatctagagaaactttggagcgatttcaaa
gatcagcagaaagctgaaggaaaaataattaaaaagagtagtgggttctctggcaaggga
ttcaagtttgatgaaacagaacaagcattggccaatgagaggaagaagttacaaaaagca
gcacttggtctacaagactcagatgacgaggatgctgcggtggatattgatgaacaaatt
gaaagcatgtttaattcaaagaagagagtaaaggacatggctgctcctgggacgtctagt
gtccctgctccaactgcagggaatgctgagaaattagaaattgccaaaagactggctctt
agaatcaatgctcagaagaatttgggcatcgagtctcaggtagatgtgatgcagcaggcc
accaatgccattctcagaggcggcactattcttgctcccactgtgtctgcaaaaaccatt
gcagagcagcttgcagaaaagatcaatgccaagctcaattacgtgcctttagagaaacaa
gaagaagagcgacaggacggtggacagaatgaatcttttaagagatatgaggaagaatta
gagatcaatgacttcccacagacggctaggtggaaggttacctctaaggaagctctacaa
agaataagtgaatattctgaagctgccattacaatcagaggaacgtacttccctcctggc
aaagaacccaaggaaggagagcggaaaatctatttggcaattgaaagtgccaatgagctg
gctgtgcagaaagcaaaagcagaaatcaccaggctcataaaggaagagctgatccgactg
caaaactcataccaaccaacaaataaaggaagatacaaagtcttataa
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integrated database retrieval system
