Castor canadensis (American beaver): 109692601
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Entry
109692601 CDS
T04791
Symbol
Fubp1
Name
(RefSeq) far upstream element-binding protein 1 isoform X1
KO
K13210
far upstream element-binding protein
Organism
ccan
Castor canadensis (American beaver)
Brite
KEGG Orthology (KO) [BR:
ccan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccan03019
]
109692601 (Fubp1)
03041 Spliceosome [BR:
ccan03041
]
109692601 (Fubp1)
Messenger RNA biogenesis [BR:
ccan03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
109692601 (Fubp1)
Spliceosome [BR:
ccan03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
109692601 (Fubp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
KH_1
KH_2
KH-I_KHDC4-BBP
FUBP_C
KH_Vigilin
KH_KhpA-B
Secretin_N
Motif
Other DBs
NCBI-GeneID:
109692601
NCBI-ProteinID:
XP_020028884
UniProt:
A0A8B7VD66
LinkDB
All DBs
Position
Unknown
AA seq
727 aa
AA seq
DB search
MTPGGKFFCTSSLRRRPQLAERRSLRRSGSGYCSVAMADYSTVPPPSSGSAGGGGGGGGG
GGVNDAFKDALQRARQIAAKIGGDAGTSLNSNDYGYGGQKRPLEDGDGSWTSPSSTTHWE
GMPSPFKDQPDAKKVAPQNDSFGAQLPPMHQQQSRSVMTEEYKVPDGMVGFIIGRGGEQI
SRIQQESGCKIQIAPDSGGLPERSCMLTGTPESVQSAKRLLDQIVEKGRPAPGFHHGDGP
GNAVQEIMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQDGPQNTGADKPLRITGDPYK
VQQAKEMVLELIRDQGGFREVRNEYGSRIGGNEGIDVPIPRFAVGIVIGRNGEMIKKIQN
DAGVRIQFKPDDGTTPDRIAQITGPPDRCQHAAEIITDLLRSVQAGNPGGPGPGGRGRGR
GQGNWNMGPPGGLQEFNFIVPTGKTGLIIGKGGETIKSISQQSGARIELQRNPPPNADPN
MKLFTIRGTPQQIDYARQLIEEKIGGPVNPLGPPVPHGPHGVPGPHGPPGPPGPGTPMGP
YNPAPYNPGPPGPAPHGPPAPYAPQGWGNAYPHWQQQAPPDPAKAGTDPNSAAWAAYYAH
YYQQQAQPPPAAPAGAPTTTQTNGQGNYGDQQNPAPAGQVDYTKAWEEYYKKMGQAVPAP
TGAPPGGQPDYSAAWAEYYRQQAAYYAQTSPQGMPQHPPAPQCLPRPSTLGSAAKSNSAE
DAASTKS
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atgacccccggcggaaaattcttctgcactagctccctgaggcggaggccgcagttagct
gagcggagatctctgagaagaagcggcagcggctactgtagtgtagccatggcagactat
tcaacggtgcctccaccctcctctggctcagctggtggtggtggcggcggcggtggcggt
ggaggagttaacgatgcgttcaaagatgcgttgcagagagcccggcagattgcagcaaaa
attgggggtgatgctggtacgtcattgaattcaaatgactatggttatgggggacaaaaa
agacctttagaagatggagatggctcttggacaagtccgagcagtacaacacactgggag
ggaatgccctctccttttaaagatcagccagatgccaagaaagtcgcacctcaaaatgac
tcttttggagcccagttgccgccgatgcatcagcagcaaagcagatctgtaatgacagaa
gaatacaaagttccagatggaatggttggatttataatcggcagaggaggtgaacagatc
tcacgcatacagcaggaatctggatgcaaaatacagatagctcctgacagtggtggccta
ccagaaaggtcttgtatgttaactggaactcctgaatctgtccaatctgctaagcgttta
ttggaccagattgttgaaaaaggaaggccagctcctggctttcatcatggtgatggacct
ggaaatgcagtccaagaaatcatgattccagctagcaaagcaggattagttattggaaag
gggggagaaactattaaacaacttcaggaacgggctggagttaaaatggttatgattcaa
gacgggcctcagaacactggtgctgacaagcctcttaggattacaggcgacccatacaaa
gtccaacaagccaaggaaatggtgttagagttaattcgtgatcaaggtggtttcagagaa
gttcgaaatgagtatgggtcaagaatcggaggaaatgaagggattgatgttccgattcca
agatttgctgttggcattgtaataggaagaaatggagagatgatcaaaaaaatacaaaat
gatgctggtgttcggattcagtttaaaccagatgatggaacaacacctgataggatagca
caaataacaggacctccagaccgatgtcagcatgctgcagaaattattacagaccttctt
cgaagtgttcaggctggtaatcctggtggacctggacctggtggccgaggaagaggtaga
ggtcaaggcaactggaacatggggccacctggtggactacaggaattcaatttcattgtg
ccaactgggaaaactggattaataataggaaaaggaggtgaaaccataaaaagcataagc
cagcagtctggtgcaagaatagaacttcagagaaatcctccacctaatgcagatcctaat
atgaagttatttacaatccgtggcactccacagcaaatagactatgctcggcaactcata
gaagaaaagattggtggcccagtaaatcctttagggccacctgtaccccatgggccccat
ggtgtcccaggcccccatgggcctccagggcctccagggcctggaactccaatgggacca
tacaatcctgcaccttataatccaggaccacctggcccagcccctcatggtcctcctgcc
ccatatgctccccaggggtggggaaatgcatatccacattggcagcaacaggctcctcct
gatccagctaaagcaggaacagatccaaattcagcagcttgggctgcttattatgctcac
tattatcaacagcaagcacagccaccacctgcagctccagctggtgcaccaactacaacc
caaactaatggacaaggtaactatggagatcagcagaatccagctccagctggacaggtt
gattatacaaaggcttgggaagagtactacaagaaaatgggtcaagcagttcctgctcct
actggggccccaccaggtggtcagccagattacagtgcagcctgggctgagtactataga
caacaagcagcctattatgcccagacaagtccccagggaatgccacagcatcctccagca
cctcagtgccttcccagaccttccaccttaggttctgctgcaaaaagcaacagtgctgaa
gatgctgcaagcaccaaatcatag
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