Castor canadensis (American beaver): 109692814
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Entry
109692814 CDS
T04791
Symbol
Trim56
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM56
KO
K12026
tripartite motif-containing protein 56 [EC:
2.3.2.27
]
Organism
ccan
Castor canadensis (American beaver)
Brite
KEGG Orthology (KO) [BR:
ccan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ccan04121
]
109692814 (Trim56)
Enzymes [BR:
ccan01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
109692814 (Trim56)
Ubiquitin system [BR:
ccan04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
109692814 (Trim56)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_UBOX
zf-B_box
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
zf-RING_5
zf-RING_2
zf-C3HC4_4
ANCHR-like_BBOX
zf-RING_4
DUF7129
Motif
Other DBs
NCBI-GeneID:
109692814
NCBI-ProteinID:
XP_020029269
UniProt:
A0A250Y4Q8
LinkDB
All DBs
Position
Unknown
AA seq
751 aa
AA seq
DB search
MVSQGSSPSLLETLSSDFLACKICLEQLHVPKTLSCLHTYCQDCLAQLAEDDHIRCPECR
ETVPVPPSGVAAFKTNFFVNGLLDLVKAREDLRAGKPACALCPLVGGTSSGGPATARCLD
CADDLCQACADGHRCTRQTHTHRVVDLVGYRAGWYDEEARERQAAQCPQHPGEALRFLCQ
LCSQLLCRECRLDPHLDHPCLPLAEAVRARRPGLEELLAGVDNSLAELEATRGMEKEALA
RLREQAARVGTQVEEAAEGVLRALLAQKQEVLGQLRAHVEAAEEAARERLAKLEGREQVA
KAAAVFARRVLSLGREAEILSLEGAIAQRLRQLQDCPWTPGPAPCVLPQLELHPGLLDKN
YQLLRLSLKEQQPQKDNRKDEANTQEGNEAQSQREDGADTERQGGVQPQCKDGALSPKED
KTQTSQEDGAQTPKGDKALSLQEDGGFQIERGSRSNKKKKFKGRCKSVSREPSPSLGPNP
EGLLPRPIFSCSFPTRMPGDRRAPRITGLCPFGLREILVADEQNKVLKRFSLNGDYRGTV
PIPEGCSPCSVAALQDSVAFSANARLYLISPSGEIHWRRALSLTQSSHSVSALPSGDRVA
VSVAGHVEVYNKEGSLATRFMPGGKASRGQRALVFLTTSPQGNFIGSDWKQNSVVVCDGM
GQVIGEYKGPGLHGCQPGSVSVDKKGYIFLTLQKINKVVILDPQGSFLGDFLTAYHGLEK
PRVTTMVDGRYLVVSLSNGTIHVFRVRFPDS
NT seq
2256 nt
NT seq
+upstream
nt +downstream
nt
atggtttcccagggctcctcaccctcccttctggagaccctgagcagtgacttcctggcc
tgcaaaatctgcctggagcagttgcatgtgcccaagactctgtcctgcctgcacacctat
tgccaagactgcctggcccagctggctgaggatgaccacatccgctgccctgagtgtcgc
gagactgtgcccgtgccgccatcaggtgtggctgccttcaagaccaacttctttgtcaat
gggctcctagacctggtgaaagccagggaagacttgcgtgcagggaagccagcctgtgcc
ctgtgccctctagtggggggcaccagttctgggggaccggccacagccaggtgcctggac
tgtgctgatgatctgtgtcaggcctgtgccgacgggcaccgctgcacccgccagacccac
acccaccgcgtggtggacctggtaggctacagggcagggtggtacgatgaggaggcccgt
gagcgtcaggcagcccagtgtccccagcacccaggggaggcgctgcgcttcctgtgccag
ctgtgctcccagctgttgtgcagagaatgtcgtctggatccccacctggaccacccctgc
ctgcccctggccgaagcagttcgtgctaggaggccaggccttgaggagctgctggcaggt
gtggacaacagtttggctgagctggaggccacccgggggatggaaaaggaagcactggcc
cgactgcgggaacaggccgccagggtggggacacaggtagaggaggcagctgagggggtc
ctcagggccctgctggcacagaagcaggaggtgctggggcagctccgggcccatgtggag
gctgctgaggaggctgcccgagagaggctggctaagctagaaggccgggagcaggtggcc
aaggcagcagctgtgtttgcccggcgggtgctcagcctgggtcgagaggctgagatcctc
tcgctggagggggctatagcccagaggttgagacagctgcaagattgtccctggacacct
gggccagccccttgcgtgctgccccagctggagctccatcctgggctcctggacaagaac
taccaactgctgcggctctccttaaaggagcaacagccccagaaagacaataggaaagat
gaggccaatacccaggaagggaatgaagcccagagccagagagaggatggagccgacaca
gagaggcagggtggagtccagccccaatgtaaggatggagccttaagtcccaaagaggac
aaaacccagacatcccaagaagatggagcccagaccccaaaaggggacaaagccctgtcg
ctccaagaagatggaggattccagatcgaaaggggtagcagatccaacaagaagaaaaag
ttcaaaggcaggtgcaagtctgtttcccgggagcccagccccagcctggggccaaatcca
gaaggcctccttcccaggcccatcttttcctgtagcttccccacgcggatgccaggggac
aggcgggcaccccgaatcactgggctctgtccctttggcctacgagagatcctggtcgca
gatgagcagaacaaggtattgaaacgcttctccctcaatggcgactacaggggcactgtg
ccaatccctgagggctgctccccatgcagtgtggccgctctgcaggactcagtggccttc
tcagcaaacgcgcgactttatctcatcagccctagtggcgaaattcactggcgccgggcc
ctgagtctcacccagtccagccactctgtgtctgcacttccaagtggggaccgtgtggcc
gtcagtgtggcaggccatgtggaagtgtacaacaaggaaggcagcctggccacccgattc
atgcctgggggcaaagccagtcggggccagcgggcactggtgtttctgaccaccagccct
cagggtaattttatagggtcagattggaaacagaatagtgtagtagtttgtgacgggatg
ggccaggtgattggggagtacaaggggcctggcctgcatggctgccagcctggctccgta
tccgtggataagaagggctacatctttctgacccttcaaaagatcaacaaggtggtgatc
ctggacccccaggggtcatttcttggggacttcctgacagcctaccatggcctggaaaag
ccccgagtgaccaccatggtggatggcaggtacctggttgtgtctctcagtaatggaacc
atccatgtctttcgggtccgttttcctgacagttaa
DBGET
integrated database retrieval system
