Castor canadensis (American beaver): 109692915
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Entry
109692915 CDS
T04791
Symbol
Pms2
Name
(RefSeq) mismatch repair endonuclease PMS2 isoform X1
KO
K10858
DNA mismatch repair protein PMS2
Organism
ccan
Castor canadensis (American beaver)
Pathway
ccan03430
Mismatch repair
ccan03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
ccan00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
109692915 (Pms2)
03460 Fanconi anemia pathway
109692915 (Pms2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ccan03400
]
109692915 (Pms2)
DNA repair and recombination proteins [BR:
ccan03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
109692915 (Pms2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutL_C
DNA_mis_repair
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-GeneID:
109692915
NCBI-ProteinID:
XP_020029460
UniProt:
A0A8B7VFK0
LinkDB
All DBs
Position
Unknown
AA seq
864 aa
AA seq
DB search
MEPAGCSSTELAKAIRPIDGKSVHQICSGQVVLSLSTAVKELVENSVDAGATSIDLRLKE
YGVDLIEVSDNGCGVEEENFEGLALKHHTSKIQEFADLTQVETFGFRGEALSSLCALSDV
TISTCHTSAKVGTRLVFDHNGKIVQKTPYPRPKGTTVSVQQLFYTLPVRHKEFQRNIKKE
YAKMVQVLQAYCVISAGIRVSCTNQLGQGKRQPVVCTSGSSSMKENIGSVFGQKQLQSLI
PFVQLPPSDSVCEEFGLSCSDALHNLFYISGFISRCEHGVGRSSTDRQFFFINRRPCDPA
KVSRLVNEVYHMYNRHQYPFVVLNISVDSECVDVNVTPDKRQILLQEEKLLLAVLKTSLI
GMFDSDVNKLNVSQQPLLDIAGNLIKTHATDVEKPVPQWQGSSPSPRTPGEEKRSVSISR
LREAFSLRHTTETKSQGPETPERRRTSPAQKRGVPSSSSSETISARGLRGSQEEGQSPTK
VPGNCVDRVEVEKDSGHSSTSAGSEEEFSTPETGSHCVSDLAVSSPEDRLFQGGMDSGEK
PPEMGLHLSGREHHVSQDESRCSCRTLPLPTDLSTPRTKRFKNEEIPSEAAVLPKLANPQ
NSSAAQVDVAVKICKKVVPLDFSMTSLAKRIKQLNHQKQQSEGKQNYRKFRAKICPGENQ
AAEDELRKEISKAMFADMEILGQFNLGFIITKLKEDLFLVDQHAADEKYNFEALQQYTVL
QPQRLIAPQTLNLTAVNEAILIENLEIFRRNGFDFVIDEDAPVTERAKLISLPTSKNWTF
GPQDIDELIFMLSDSPGVMCRPSRVRQMFASRACRKSVMIGTALSTSEMKKLITHMGEMD
HPWNCPHGRPTMRHIANLDVISQS
NT seq
2595 nt
NT seq
+upstream
nt +downstream
nt
atggagccggctgggtgctcgagcacagagcttgcgaaggccatcagacctatcgatggg
aagtcagtccatcagatttgctcgggccaggtggtactaagtctaagcactgctgtgaag
gagttggtagaaaatagtgtggatgctggtgccaccagcattgatctaaggcttaaagag
tatggcgtggatttgattgaagtttcagacaatggatgtggagtagaagaagaaaacttt
gaaggcttagctctgaagcatcatacgtctaagattcaggagtttgctgacctcactcag
gttgagacctttggctttcggggggaagccctgagctcactttgtgcactgagtgatgta
actatttctacctgccacacatctgcaaaggttgggacccggcttgtgtttgatcacaat
gggaaaattgtccagaaaaccccctaccctcgacccaaaggaacgacagtcagtgtgcag
cagttattttacacgctgcctgtgcgccataaggaatttcaaaggaatattaaaaaggag
tatgccaaaatggtccaggtcttacaggcatactgtgtcatttcagcaggcatccgtgta
agttgcaccaatcagcttgggcaagggaagcggcagcctgtggtctgcacaagtggaagc
tccagcatgaaggaaaacatcggctctgtgttcgggcagaagcagttgcaaagcctcatt
ccttttgttcagctgccccctagtgactcggtctgtgaagaattcggcctgagctgctct
gacgccctccataatctgttctacatctcaggcttcatctcccgctgcgagcacggcgtc
gggaggagctccaccgacaggcagtttttcttcatcaatcgtcggccttgcgacccagca
aaggtctccaggcttgtgaatgaggtctaccacatgtacaaccgccatcagtatccgttt
gtggttctcaacatttctgtcgattctgaatgtgttgatgtcaacgtgactccagacaaa
aggcaaatcttactgcaagaggagaagcttttgttggcagttttaaagacctctttgatt
gggatgttcgatagtgatgtaaacaagcttaatgtcagtcagcaaccactgttggatatt
gcaggtaacttaataaagacgcatgctacagatgtggaaaagcctgtgccacaatggcag
ggcagctccccttccccacggactccaggagaagagaaaaggtccgtgtccatttccagg
ctaagagaggccttttctcttcgtcataccacagagacgaaatctcagggcccagagact
cctgaacggagacggacttctccagcacagaaaaggggtgtgccatcttctagttcctcg
gaaaccatctctgccagaggcctcaggggctctcaggaagaggggcagagtcccacgaag
gtccctggtaattgtgtggacagagtggaagtggagaaggactcagggcacagtagcacc
tcagctggctcagaggaagaattcagtaccccagaaacgggtagtcattgcgttagtgac
cttgcggtgagctccccggaagacagactctttcagggaggcatggactctggtgagaaa
ccacctgaaatgggccttcatctttcaggaagggagcaccacgtaagtcaggatgagagc
agatgttcgtgtagaactttgcctctgccaactgacctctccaccccccgcaccaagcgt
tttaaaaacgaagaaatcccctcagaggctgccgttcttccaaagttggctaatcctcag
aacagctcagcagctcaggtcgatgtggctgtaaaaatttgtaagaaagttgtgcccctt
gacttttctatgacttctttagctaaacgaataaagcagttaaatcaccaaaaacaacag
agtgaaggcaaacagaactacaggaaatttagggcaaagatttgtcctggagaaaaccaa
gcagcagaagatgaactaagaaaagagataagtaaggcaatgtttgcagacatggagatc
cttggccagtttaacttgggatttataataaccaaactgaaggaggaccttttcctagtg
gaccagcatgctgcggatgagaagtacaacttcgaggcactgcagcagtacacggtgctc
cagccacagaggctcatcgcacctcagacgctgaacttaactgctgtcaatgaagccatc
ttgattgaaaatctagaaatattccggaggaatggctttgattttgtcattgatgaagat
gctccagtcaccgagagagcgaaactcatttccttgccaactagtaaaaactggaccttt
ggaccacaggacatagatgagctgatcttcatgctgagtgatagccctggggtgatgtgc
cggccttcccgcgtcaggcagatgtttgcctccagggcctgccggaagtctgtgatgatt
ggcacggctcttagcacaagcgagatgaagaagcttatcacccacatgggtgagatggac
cacccctggaactgcccccacggaaggccgaccatgaggcacattgccaatctggatgtc
atttctcagagctga
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