Castor canadensis (American beaver): 109692920
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Entry
109692920 CDS
T04791
Symbol
Usp42
Name
(RefSeq) LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal hydrolase 42
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
ccan
Castor canadensis (American beaver)
Brite
KEGG Orthology (KO) [BR:
ccan00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ccan01002
]
109692920 (Usp42)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ccan04121
]
109692920 (Usp42)
Enzymes [BR:
ccan01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
109692920 (Usp42)
Peptidases and inhibitors [BR:
ccan01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
109692920 (Usp42)
Ubiquitin system [BR:
ccan04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
109692920 (Usp42)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
109692920
NCBI-ProteinID:
XP_020029476
UniProt:
A0A8B7VBX1
LinkDB
All DBs
Position
Unknown
AA seq
1324 aa
AA seq
DB search
MTIVDKAESSGPSTYQNQPGSSEAVSPGDMDTGSASWGAVSSLNDVPNHTLSLGPVPGAV
VYSSSSVPDKSKPSPQKDQALGDGIAPPQKVLFPSEKICLKWQQTHRVGAGLQNLGNTCF
ANAALQCLTYTPPLANYMLSHEHSKTCHAEGFCMMCTMQAHITQALSNPGDVIKPMFVIN
EMRRIARHFRFGNQEDAHEFLQYTVDAMQKACLNGSNKLDRHTQATTLVCQIFGGYLRSR
VKCLNCKGVSDTFDPYLDITLEIKAAQSVNKALEQFVKPEQLDGENSYKCSKCKKMVPAS
KRFTIHRSSNVLTLSLKRFANFTGGKIAKDVKYPEYLDIRPYMSQPNGEPIIYVLYAVLV
HTGFNCHAGHYFCYIKASNGLWYQMNDSIVSTSDIRSVLSQQAYVLFYIRSHDVKNGGEL
PHSTHSPGQSSPRPGINQRVVTNKQAAPGFIGPQLPSHVIKNPPHLNGTGPLKDTPSSSM
SSPNGNPSINRTSPVNASTSVQNWSVNRPSVIPEHPKKQKITISIHNKLPVRQGQAQPNL
HSNSLEAPSKPVPSSTITTSAIQSTSSASTISVSSKVAKPLSPSESCAQPVMNGMSKLSS
SVLVPYGAESSEESDEESKGLAKENGMGPAVSSHTAGQQADNSEASRHEPPEPINGANGA
DCDLKENGLSLDTVSCQVQPPLHAENPFSKANGLPGKLIPAPLPSLPEDTVLETFKLSNK
VKDSADEMSPPRAEGSPAEDPAELEPAGTPAAALETLEGVASLSSMFKALLSCDPSITST
KEDLSEVGLAKPDESLSVVTNLFGPTSGSTGDEQVPKLCDSGNVAKDPSQLSPEGRGMLP
ESPRDSIPAAVLERWSLAPVALSDDSCEPQLLVHLSRDGCQAAGEPAGAPGAAMAVTVMP
CTQPDRTAGVPSEGGAPQSPDSSLEAGPRAPAPPAREKISLRKVDRGHYRSRRDWRDRSS
SGEHVRESRSCTEDRYHKGRRYSRERAKPERHPPEHCTAGQLLASHGDRGSLGERRSLGC
YSHHHSRNRSGPDQDWGRFHHAESEHIWGRDKFYPEKMRWSKCRYYHDRYVPYTARDVRE
WRPQHGREHDRTGQPTRPHKDCYWGRKGWELARAKERHGFHSPRSGMAPALSLHPERHPQ
EKGALGAGAEGSSCSLSERFHEHESAKARKRRYESVDQHDSHLEKARRSLQKEPSEEPRA
KKHKKSKKKKKSKDRRRDRSCRHQQDSDLSVSYSDADLHRHRKKKKKKKRHSRKSEDLGK
EVELRLGKAASYEAVGHLRRAEAGFLLADGLLLEGAGPFQQKTEHLRMESRADRCRLSEY
GQGD
NT seq
3975 nt
NT seq
+upstream
nt +downstream
nt
atgaccatagttgacaaagctgaatcttcaggcccgtcgacctatcagaaccagcctggc
agttctgaggcggtctcacctggagacatggacacaggctctgccagctggggtgctgtg
tcttcattaaatgatgttccaaaccacacactctctttaggaccagtacctggtgctgta
gtttattcgagttcatctgtacctgacaaatcaaagccatcaccacaaaaggatcaagcc
ctaggtgatggcattgctcccccacagaaggttcttttcccatctgagaagatttgtctt
aagtggcaacaaactcacagagttggcgctgggctccagaatttgggtaacacctgtttt
gccaatgcagcgttgcagtgtttaacttacacgccacctctcgccaactacatgttatca
catgagcactccaagacatgtcacgcagaagggttttgcatgatgtgcaccatgcaagcg
cacatcacccaagccctcagtaaccctggtgacgtcatcaagcccatgttcgtcatcaac
gagatgcgccgtatagctaggcacttccgttttggaaaccaagaagatgcccacgagttc
cttcagtacactgttgatgctatgcaaaaagcatgcttgaatggcagcaataaattagac
agacacactcaagccacgacactcgtttgtcagatatttggaggatacctgcgatctaga
gtgaaatgtttaaattgcaagggtgtttcggatacttttgatccatatctcgatataaca
ttggagataaaggctgctcagagtgttaacaaggcattggagcagtttgtgaagccggaa
cagctggatggagaaaactcctataagtgcagcaagtgtaaaaagatggttccagcttcg
aagaggttcaccatccatagatcctcgaatgttctcacactttctctgaaacgctttgca
aactttactggtggaaaaattgctaaggatgtgaaataccccgagtaccttgacattcgg
ccgtacatgtcacaacccaatggagagccaattatttatgtcttgtatgcagtgctagta
catactggcttcaactgccacgcgggccattacttctgctacataaaggctagcaatggc
ctctggtatcaaatgaatgactccatcgtgtccaccagcgatattagatcagtgctcagc
cagcaagcttatgtgctcttttacatcaggtcccatgatgtgaaaaatggaggtgaactt
cctcattccacccacagccctggccagtcctctccccgccctggaatcaatcagcgtgtt
gtcaccaataagcaggctgcgccagggtttattggaccacagcttccctctcatgtgata
aagaatccacctcacttgaatgggactggaccattgaaggacacgcccagcagttccatg
tcaagtcctaacggaaatcctagcatcaacaggactagtcctgtgaatgcttccacttct
gttcaaaactggtcagtgaacaggccctcagttattccagaacaccccaagaaacaaaaa
atcaccatcagtattcacaataagttgcctgttcgccaaggtcaggctcagccaaacctg
catagcaattctttggaggctcccagcaagcctgttccctcttctaccattaccacttct
gcaattcagtctacctcgagtgcatccacgatatcagtttctagcaaagtagcaaaaccg
ctctccccgagtgagtcctgtgcacagccagtgatgaacggcatgtccaagctgagctcc
agcgtgctggtcccctatggcgccgagtcctctgaagagtcagacgaggagtccaagggc
ctggccaaggaaaacggcatgggccccgcagtgagctctcacactgctggtcagcaggct
gacaacagtgaggcctcgcggcatgagccgccagaacctatcaatggtgctaatggtgca
gactgtgacctgaaagaaaacggcctgtcattggacacggtcagttgccaagtgcagccc
cctctacatgcagaaaatcccttttccaaagcaaatggccttcccggaaagctgatacct
gctcctttgccatctctcccagaagacacagtcttagagaccttcaaacttagcaacaaa
gtcaaagactctgcggatgaaatgagtccaccccgagcagagggaagtcctgcggaggac
cctgccgagctcgagcctgccggcaccccagctgctgcccttgagaccctggagggagtc
gccagcctgagcagcatgttcaaggctttgctgtcctgtgaccccagcatcacctctacc
aaagaagacctctctgaagttggtttggccaagcctgacgaatctctgtctgttgtcacc
aatctctttggccccaccagtggtagcacaggggacgaacaagttcccaaactctgtgac
tctgggaatgtggcaaaggaccccagccagttgtccccagaggggagaggaatgctccca
gagagccctcgggactccatacctgcggccgtcttggagcggtggagcctggcccccgtg
gcactttcggatgacagctgtgagcctcagctcctggttcacctcagcagagatgggtgc
caggctgcgggggagcccgccggagccccgggcgctgccatggccgtgaccgtgatgccc
tgtactcagccagacaggactgcgggcgtcccttcagaagggggtgccccacagagccct
gactcgagccttgaggcagggccgagagctccggctcctccagccagggagaaaatcagc
ctgaggaaggttgaccggggacactaccgcagccggagagactggagggaccggtcctcc
agtggcgagcacgtccgggagagccgcagctgcacagaggaccgctaccacaaggggcgg
cgctacagcagggagagggccaagcccgagcgccacccacccgagcactgcaccgcgggc
cagctcctggccagccacggcgacaggggcagcctcggggagcgccgctcactgggctgc
tacagccaccaccactcacgaaaccgcagtgggccagaccaggactggggccggttccac
cacgcggagagtgagcacatctggggccgggataaattctatcccgagaagatgcggtgg
agcaaatgcaggtactaccatgacaggtacgtcccctacacggcccgggacgtgcgggag
tggcggcctcagcatggccgggagcacgaccgaacaggacagcccactcggccacacaag
gactgctactggggccgcaagggctgggagctggccagggccaaggagcggcatggcttc
cacagcccacgatcgggcatggcccccgccctgtctctgcaccccgagaggcacccccag
gaaaaaggggccctcggagccggagctgagggcagcagctgcagtctctctgagcggttt
cacgaacacgaaagtgcaaaggcccggaaacggcggtacgagagtgtggaccagcatgac
agccacctggagaaggcccgcaggagcctgcagaaggagccttcagaagagcccagggcc
aagaaacacaaaaagtcaaagaagaaaaagaaatccaaagacagacgccgcgatcgcagc
tgcaggcaccagcaggactctgatctgtcagtgtcgtactcggatgctgacctccacaga
cacagaaaaaagaagaagaaaaagaagagacattcgagaaagtcagaggaccttggcaaa
gaggtggagctgcgcttggggaaggccgcgagctatgaggctgtgggccacctccgcagg
gcggaagccggcttcctcctcgctgacggcctgcttctggagggcgccggccctttccag
cagaagacagagcatttgaggatggagagcagggctgacaggtgccgtctgtctgagtat
ggccagggtgattga
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integrated database retrieval system
