Castor canadensis (American beaver): 109693161
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Entry
109693161 CDS
T04791
Symbol
U2af2
Name
(RefSeq) splicing factor U2AF 65 kDa subunit isoform X1
KO
K12837
splicing factor U2AF 65 kDa subunit
Organism
ccan
Castor canadensis (American beaver)
Pathway
ccan03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ccan00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109693161 (U2af2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ccan03041
]
109693161 (U2af2)
Spliceosome [BR:
ccan03041
]
Complex A
U2 snRNP components
U2 related factors
109693161 (U2af2)
Complex B
109693161 (U2af2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_7
Transformer
Motif
Other DBs
NCBI-GeneID:
109693161
NCBI-ProteinID:
XP_020029866
UniProt:
A0A250Y1Q4
LinkDB
All DBs
Position
Unknown
AA seq
475 aa
AA seq
DB search
MSDFDEFERQLNENKQERDKENRHRKRSHSRSRSRDRKRRSRSRDRRNRDQRSASRDRRR
RSKPLTRGAKEEHGGLIRSPRHEKKKKVRKYWDVPPPGFEHITPMQYKAMQAAGQIPATA
LLPTMTPDGLAVTPTPVPVVGSQMTRQARRLYVGNIPFGITEEAMMDFFNAQMRLGGLTQ
APGNPVLAVQINQDKNFAFLEFRSVDETTQAMAFDGIIFQGQSLKIRRPHDYQPLPGMSE
NPSVYVPGVVSTVVPDSAHKLFIGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSATGLSK
GYAFCEYVDINVTDQAIAGLNGMQLGDKKLLVQRASVGAKNATLVSPPSTINQTPVTLQV
PGLMSSQVQMGGHPTEVLCLMNMVLPEELLDDEEYEEIVEDVRDECSKYGLVKSIEIPRP
VDGVEVPGCGKIFVEFTSVFDCQKAMQGLTGRKFANRVVVTKYCDPDSYHRRDFW
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgtcggacttcgacgagttcgagcggcagctcaacgagaataaacaagagcgggacaag
gagaaccggcaccggaaacgcagtcatagccgctctagaagccgggaccgcaaacgccgg
agtcggagccgggatcggcgcaaccgagaccagcgcagtgcctcccgggacaggcggcga
cgaagcaaacctttgaccagaggcgctaaagaggagcacggtggattgattcgttccccc
cgacatgagaagaagaagaaggttcgtaaatactgggacgtaccaccacccggctttgag
cacatcaccccaatgcagtacaaggccatgcaagctgcgggtcagattccagctactgcc
cttctccccaccatgacccctgatggtctggctgtgaccccaacgccggtgcccgtggtt
gggagccagatgaccagacaagcccggcgcctctacgtgggcaacatcccttttggcatc
actgaggaggccatgatggatttcttcaatgcccagatgcgcctggggggactgacccag
gcccctggcaatccggtcttggctgtgcagattaaccaagacaagaattttgcctttttg
gagtttcgctcagtggatgagactacccaggccatggcttttgatggcatcatcttccag
ggccagtcactgaagattcgccggcctcatgactaccagccattgcctggcatgtcggag
aacccctctgtctatgtgcctggagttgtgtccacagtggtccctgattctgcccacaaa
ctgttcattggaggcttacccaactacctgaatgatgaccaggtaaaagaactgctgaca
tcgtttgggcctctcaaggccttcaacctggtcaaggacagtgccacagggctctccaag
ggctatgccttctgtgagtacgtggacatcaacgtcacagatcaggctattgcggggctg
aatgggatgcagctgggtgacaagaagctgcttgtccagagggcgagtgtgggcgccaag
aatgccacgctggtgagccccccgagcaccatcaatcagacacctgtgaccctgcaagtg
ccaggcctgatgagctctcaggtgcagatgggtggccacccaactgaggtcctgtgcctc
atgaacatggtgctgcctgaggagctgctggatgatgaggagtatgaggagattgtggag
gacgtgcgagatgagtgcagcaagtacgggctggtcaagtccatcgagattccccggccc
gtggatggtgttgaggtgcccggctgtggaaagatctttgtggagttcacctctgtgttt
gactgccagaaagccatgcagggcctaactggccgcaagttcgccaacagagtggttgtc
acgaaatactgtgaccccgactcttaccaccgcagggacttctggtag
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