Castor canadensis (American beaver): 109693244
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Entry
109693244 CDS
T04791
Symbol
Zswim8
Name
(RefSeq) zinc finger SWIM domain-containing protein 8 isoform X1
KO
K25207
zinc finger SWIM domain-containing protein 8
Organism
ccan
Castor canadensis (American beaver)
Brite
KEGG Orthology (KO) [BR:
ccan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ccan04121
]
109693244 (Zswim8)
Ubiquitin system [BR:
ccan04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul2 complex
Target recognizing subunit
109693244 (Zswim8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ZSWIM4-8_C
Motif
Other DBs
NCBI-GeneID:
109693244
NCBI-ProteinID:
XP_020030029
UniProt:
A0A250Y853
LinkDB
All DBs
Position
Unknown
AA seq
1834 aa
AA seq
DB search
MELMFAEWEDGERFSFEDSDRFEEDSLCSFISEAESLCQNWRGWRKQSAGPNSPTGGGGG
GGSGGTRTRDGLVIPLVELSAKQVAFHIPFEVVEKVYPPVPEQLQLRIAFWSFPENEEDI
RLYSCLANGSADEFQRGDQLFRMRAVKDPLQIGFHLSATVVPPQMVPPKGAYNVAVMFDR
CRVTSCSCTCGAGAKWCTHVVALCLFRIHNASAVCLRAPVSESLSRLQRDQLQKFAQYLI
SELPQQILPTAQRLLDELLSSQSTAINTVCGAPDPTAGPSASDQSTWYLDESTLTDNIKK
TLHKFCGPSPVVFSDVNSMYLSSTEPPAAAEWACLLRPLRGREPEGVWNLLSIVREMFKR
RDSNAAPLLEILTDQCLTYEQITGWWYSVRTSASHSSASGHTGRSNGQSEVAAHACASMC
DEMVTLWRLAVLDPALSPQRRRELCAQLRQWQMKVIENVKRGQHKKTLERLFPGFRPAVE
ACYFNWEEAYPLPGVTYSGTDRKLALCWARALPPRPGVSRSGGLEESRDRPRPLPTEPAV
RPKEPGAKRKGLGEGVSSSQRGPRRLSAEGGDKALHKMGPSGGKAKALGGAGSGGKGSAS
SGSKRRLSSEDSSLEPDLAEMSLDDSSLALGAEASTFGGFPESLPHCPPPGGSRVPATFL
PEPPDTYEEDAGVYFSEGPEPHTASIGPPSLLPGEVCPRDDLPSTDESGNGLPKTKEASP
AVGEEDDDYQAYYLNAQDGAGGEEEKAEGGAGEEHDLFAGLKPLEQESRMEVLFACAEAL
HAHGYSSEASRLTVELAQDLLANPPDLKVEPPPAKGKKNKVSTSRQTWVATNTLTKAAFL
LTVLSERPEHHNLAFRVGMFALELQRPPASTKALEVKLAYQESEVAALLKKIPLGPSEMS
TMRCRAEELREGTLCDYRPVLPLMLASFIFDVLCAPVVSPTGSRPPSRNWNNEMPGDEEL
GFEAAVAALGMKTTVSEAEHPLLCEGTRREKGDLALALMITYKDDQAKLKKILDKLLDRE
SQTHKPQTLSSFYSSSRPATANQRSPSKHGAPSAPGALQPLTSGSAGPAQPGNVTGAGPG
PTEGFTEKNVPECSPHSPCEGLPPEAALTPRPEGKVPSRLALGSRGGYNGRGWGSPGRPK
KKHTGMASIDSSAPETTSDSSPTLSRRPLRGGWAPTSWGRGQDSDSISSSSSDSLGSSSS
SGSRRASASGGARAKTVEVGRYKGRRPESHAPHVPNQPSEAAAHFYFELAKTVLIKAGGN
SSTSIFTHPSSSGGHQGPHRNLHLCAFEIGLYALGLHNFVSPNWLSRTYSSHVSWITGQA
MEIGSAALTILVECWDGHLTPPEVASLADRASRARDSNMVRAAAELALSCLPHAHALNPN
EIQRALVQCKEQDNLMLEKACMAVEEAAKGGGVYPEVLFEVAHQWFWLYEQTAGGSSTAR
EGATSCSASGIRAAGEVGRGLPEGRGGPGTEPVTVAAAAVTAAATVVPVISVGSSLYPGP
GLGHGHSPGLHPYTALQPHLPCSPQYLTHPAHPAHPMPHMPRPAVFPVPGSAYPQGVHPA
FLGAQYPYSVTPPSLAATAVSFPVPSMAPITVHPYHTEPGLPLPTSVALTSVHPASTFPA
IQGASLPALTTQPSPLVSGGFPPPEEETHSQPVNPHSLHHLHAAYRVGMLALEMLGRRAH
NDHPNNFSRSPPYTDDVKWLLGLAAKLGVNYVHQFCVGAAKGVLSPFVLQEIVMETLQRL
SPAHAHNHLRAPAFHQLVQRCQQAYMQYIHHRLIHLTPADYDDFVNAIRSARSAFCLTPM
GMMQFNDILQNLKRSKQTKELWQRVSLEMTTFSP
NT seq
5505 nt
NT seq
+upstream
nt +downstream
nt
atggagctgatgttcgctgagtgggaggacggagagcgcttctccttcgaggattccgac
cgctttgaggaggattcgctctgctccttcatctccgaggccgagagcctttgccagaac
tggcggggatggcgcaaacagtcagcggggcccaattcccctacaggcggcgggggcgga
ggtggcagtggcggtacccgaacgcgagatggactggtgatcccattagtggagctgtca
gcaaagcaggtggcatttcacatcccgtttgaagtggtggaaaaagtttaccctccagtg
cctgagcagctccagctccgaattgctttttggagcttccctgagaatgaagaggacatt
cggctttattcatgcctggccaatggcagtgcagatgaattccagcgaggggatcagctg
tttcgcatgagggctgtgaaggacccactgcagatagggttccacctgagtgctactgtg
gtgccaccacagatggtccctcccaaaggggcctacaacgtggctgtgatgtttgatcgc
tgccgggtcacttcctgcagctgtacctgtggggctggggccaaatggtgcacccatgtc
gtggcactctgtctcttccgcatccacaacgcttctgcagtctgcctgagggccccagtc
tcagagtccctctctcggctacagagggaccagttacagaagtttgctcagtatctcatc
agtgagctccctcagcagatcctccccacagcccagcgtctcttggatgaactcttgtcc
tctcagtcaacagccatcaatacagtgtgtggagccccagaccccacagcagggccctca
gcttctgatcagagcacttggtatttggatgagtcgacactcactgacaacatcaagaag
acattgcataagttctgtggtccctccccagtggtcttcagtgatgtcaactctatgtat
ctgtcttccacggagcccccagctgctgctgaatgggcatgtctgttgcgccctctgagg
ggccgtgagccagagggtgtctggaacctgcttagcatcgtgcgggaaatgttcaagcgg
agggatagcaatgctgcccccttgctggaaatcctcactgaccagtgcctcacctatgaa
cagataacaggttggtggtacagtgtgcgcacctcagcttcacacagcagcgccagcggg
cacacaggccgtagcaatgggcagtcagaggtggcagcccatgcatgtgcgagcatgtgt
gacgagatggtcacactgtggaggctggctgtgctggaccctgccctcagcccacagcgt
cgacgggagctgtgtgcacagctgcgccagtggcaaatgaaggtgattgagaatgtaaag
cggggacagcacaagaagaccctggagcggcttttccctggcttccgaccagcagtggag
gcctgctactttaactgggaagaggcttacccactccctggtgtcacttatagtggcact
gaccggaaattggccctgtgctgggcccgggctctgccccctcggccaggagtctcccgc
tctgggggcctagaggagtcccgggaccggccccgacctcttcctactgagccagctgtg
cggcccaaggagcctggggccaagcgcaagggattgggtgagggggtctcatcctcacag
cggggtccccgccgcctctctgctgaagggggagataaagctctgcataagatgggtcca
agtgggggaaaagccaaggcactgggtggggctggtagtgggggtaagggctcagcaagc
agtggcagcaagcgacggctgagcagtgaagacagctctttggagccagatctggcagaa
atgagcctggatgacagtagcctggccctgggtgcagaggccagcacctttggtggattc
cctgagagccttccacactgtcctccccctggtggctctcgagttcctgctaccttcctt
cctgagccaccagatacttatgaggaagatgctggcgtgtacttctcagaagggcctgag
cctcacacagcctccattgggcctcccagtctactccctggggaggtctgtccccgggac
gacctcccttccacagatgagagtggcaatgggcttcctaaaaccaaagaggcatcccct
gcagttggagaggaggatgatgactaccaggcatattacctgaatgcccaagatggggct
gggggcgaggaggagaaggccgagggcggggctggggaggagcacgacctgtttgctggg
ctgaagccactggaacaagagagccgcatggaggtgttatttgcctgtgctgaggcccta
catgcacatggctatagcagtgaggcctcccgcctcactgtggagcttgcccaggacctg
ctagccaacccacccgacctcaaggtagagccgccccctgccaagggcaagaagaacaag
gtatccacaagccggcagacctgggtggctactaacaccctgaccaaggcagccttcctg
ttgacagtgctaagtgagcgcccagagcaccacaacctggccttccgagtcggcatgttt
gccttggagctacaacgacctccggcttctaccaaagccttggaggtgaagctggcatac
caggagtctgaggtggctgccctgctcaagaaaatccctctgggtcccagtgagatgagt
accatgcgatgccgggcagaggagcttcgggaaggcacactctgtgactatcggcctgtg
ttgcccctcatgttggccagtttcatctttgacgttctctgtgctccagtggtttctcct
acgggttcccggcctccaagtcgcaactggaataatgagatgcctggagatgaggagctg
ggatttgaagcggcagttgctgctttgggtatgaagacaacggtgagtgaggcagaacat
cccctcctatgtgaaggcacacgtcgggagaagggtgacctggcattagcgcttatgatc
acttacaaggatgaccaggccaagctcaagaagatcttggacaaactcttagaccgagag
agccagacgcataagccacagacgctgagttcgttctactcatctagccgcccagctaca
gccaaccagaggtctccttcaaagcatggggccccgtctgctccaggggccctacaacca
ctgacctcaggctctgcagggcctgctcagccagggaatgtgacaggggctgggccaggc
cccactgagggcttcacagagaagaatgtgcctgaatgctctccacattctccctgtgag
ggtcttccgcctgaggcagctttgactccaaggccggaggggaaggttcccagccgtctg
gcacttggcagtcgtggaggctacaatggacggggctggggctctcctgggcggcccaaa
aaaaagcacacaggcatggccagcattgacagcagtgcccctgaaacaacatcggatagt
tctcccaccttaagtcggaggccacttcgagggggctgggctcccacctcctggggtcga
ggacaagacagtgacagcattagcagctcttcctcggactccctgggctcctcgtcttcc
agtgggagtcgccgggccagtgccagtggaggggcccgggcaaagacggttgaagttggc
aggtacaagggccgccgccccgagagtcatgctccccatgtacccaatcagccgtcagag
gcagctgcacacttctacttcgagctggcgaagacagtgctgatcaaggcagggggcaac
agcagcacttccattttcacacatccatcttcctcagggggccaccagggtcctcaccgc
aacctgcacctttgcgccttcgagatcgggctttacgcccttggcctgcacaactttgtt
tctcccaactggctctcacgtacctattcttctcacgtctcctggattacagggcaggca
atggaaattggcagtgcagccctgactatattggtagaatgctgggatgggcacctgaca
ccccccgaggttgcatccctggctgatagagcatcaagggcacgagactccaatatggtg
agggcagcagcagagctggccctcagctgcctgcctcatgcccatgcgttgaaccccaat
gaaatccagcgggccttggtgcaatgcaaggagcaggataacctgatgttggagaaggcc
tgcatggcagtggaagaggctgctaagggtgggggcgtgtaccctgaagtactgtttgag
gttgctcaccagtggttctggctatatgagcaaacagccggtggctcatccacagcccgt
gaaggggctacaagctgtagtgcaagtgggatccgggcagctggggaggttgggcggggg
ctgcctgagggcaggggaggcccagggactgagcctgttacagtggcagcagcagcagtg
acagcagcagccacggtggttccagtcatctcagtggggtccagtttatatccaggtcca
ggactgggtcacggtcactcccctggcctgcacccctacactgctttacagccccacctg
ccctgcagccctcagtacctcacccacccagctcaccctgcccaccccatgcctcatatg
ccccggcctgccgtcttccctgtgcccggctctgcatacccacagggtgtgcatcctgcg
ttcctgggggctcagtacccttactcagtgactcctccctcacttgctgccactgctgtg
tctttccctgtcccttccatggcacccatcacagtccatccctaccacacagaaccaggg
ctcccactgcctaccagtgtggccttgaccagtgtccatccggcatccacgtttcctgcc
atccagggtgcctcactacctgctctgactacacagcccagtcctctggtgagcgggggt
ttcccaccaccggaggaggagacgcacagccaacctgtgaatccacacagcctgcaccac
ctgcatgctgcctaccgtgttggaatgctggcattggagatgctgggccgccgagcacac
aacgaccaccccaacaacttctctcgctcccccccctacactgatgatgtcaaatggttg
ctggggctggcagcaaagctgggagtgaactacgtgcaccagttctgtgtgggggcagcc
aagggggtgctgagcccgtttgtgctgcaggagatcgtcatggagacgctgcagcggctg
agccccgctcatgcccacaaccacctgcgtgccccggccttccaccaactggtgcagcgc
tgccagcaggcatacatgcagtacatccatcaccgcttgattcacctgacccctgcggac
tacgacgactttgtgaatgcgatccgcagtgctcgaagcgccttctgcctgacacccatg
ggcatgatgcagttcaacgacatcctgcagaacctcaagcgcagcaaacagaccaaggag
ttgtggcagcgggtctcactcgagatgaccaccttctccccctga
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integrated database retrieval system
