Castor canadensis (American beaver): 109693344
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Entry
109693344 CDS
T04791
Symbol
Vps11
Name
(RefSeq) vacuolar protein sorting-associated protein 11 homolog isoform X1
KO
K20179
vacuolar protein sorting-associated protein 11
Organism
ccan
Castor canadensis (American beaver)
Pathway
ccan04140
Autophagy - animal
ccan04148
Efferocytosis
ccan05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
ccan00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
109693344 (Vps11)
04148 Efferocytosis
109693344 (Vps11)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
109693344 (Vps11)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccan04131
]
109693344 (Vps11)
Membrane trafficking [BR:
ccan04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
109693344 (Vps11)
Hops complex
109693344 (Vps11)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VPS11_C
Clathrin
zf-C3HC4_2
zf-RING_2
zf-C3HC4
zf-rbx1
zf-C3H2C3
zf-RING_UBOX
zf-RING_5
DUF4979
TPR_11
DLP_helical
zf-RING_11
zf-HC5HC2H
zf-C3HC4_3
zf-RING-like
zf-ANAPC11
DUF5847
Motif
Other DBs
NCBI-GeneID:
109693344
NCBI-ProteinID:
XP_020030192
UniProt:
A0A8B7VFG0
LinkDB
All DBs
Position
Unknown
AA seq
967 aa
AA seq
DB search
MAAYLQWRRFVFFDKELVKEPLGSDGAAPGAAPASGSTASKFFCLPPGITVCDSGRGSLV
FGDMEGQIWFLPRSLQLTGFQAYKLRVTHLYQLKQHNILASVGEDEEGINPLVKIWNLEK
RDGGNPLCTRIFPAIPGTEPTVVSCLTVHENLNFMAIVFLCMTQIVFNSQSQPPRTRNGK
KKVSFTDGSVTLNKGDITRDRHSKTQILHKGNYPVTGLAFRQAGKTTHLFVVTTENVQSY
IVSGKDYPRVELDTHGCGLRCSALSDPSQDLQFIVAGDECVYLYQPDERGPCFAFEGHKL
IAHWFRGYLVIVSRDRKVSPKSEFTSRDSQSSDKQILNIYDLCNKFIAYSAVFEDVVDVL
AEWGSLYVLTRDGRVHALQEKDTQTKLEMLFKKNLFEMAINLAKSQHLDSDGLAQIFMQY
GDHLYSKGNHDGAVQQYIRTIGKLEPSYVIRKFLDAQRIHNLTAYLQTLHRQSLANADHT
TLLLNCYTKLKDSSKLEEFIKTKSESEVHFDVETAIKVLRQAGYYSHALYLAENHAHHEW
YLKIQLEDIKNYQEALRYIGKLPFEQAESNMKRYGKTLMHHIPEQTTQLLKGLCTDYRPS
LDGRGDKETPGYRANSEEFIPIFANNPRELKAFLEHMSEVQPDSPQGIYDTLLELRLQNW
AHEKDPQVKEKLHAEAISLLKSGRFCDVFDKALVLCQMHDFQDGVLYLYEQGKLFQQIMH
YHMQHEQYRQVIAVCERHGEQDPSLWEQALSYFARKEEDCKEYMAAVLKHIENKNLMPPL
LVVQTLAHNSTATLSVIRDYLVQKLQKQSQQIAQDELRVRRYREETTRIRQEIQELKASP
KIFQKTKCSICNSALELPSVHFLCGHSFHQHCFESYSESDADCPTCLPENRKVMDMIRAQ
EQKRDLHDQFQHQLKCSNDSFSVIADYFGRGVFNKLTLLTDPPTARLTPSLEAGLQRDLL
MHSRRGT
NT seq
2904 nt
NT seq
+upstream
nt +downstream
nt
atggcggcctacctgcagtggcggcgcttcgttttcttcgacaaggagctagtgaaggag
ccactgggcagtgatggggctgctcccggggccgcgcctgcctccggatccactgcctcc
aagttcttttgcctccctcctggcatcactgtctgcgactcaggccgggggagcctggtc
tttggcgatatggaaggccaaatctggttcttgccacgttccctacagcttacaggcttc
caggcctacaaactacgagtgacacacctgtaccaactgaagcagcacaatattctagca
tccgttggtgaagatgaagagggtattaaccccttggtaaagatctggaacctggagaag
agagatggtggcaatccactctgcactcgaatcttccctgccatcccaggaacagagcca
actgttgtgtcttgtttgactgtccatgaaaatctcaactttatggccatagtgtttctc
tgtatgactcaaatagttttcaatagccagagtcagccacccaggacaagaaacggaaaa
aaaaaagtcagtttcacagatggcagcgttacattgaacaaaggagacatcaccagggac
cggcatagcaagacccagattttacacaagggcaactatcctgttactggactggccttt
cgccaagcaggaaagaccactcacttatttgttgtgacaactgaaaatgtccagtcctat
atagtttctggaaaagactaccctcgtgtggagttggacacccatggttgtggtctgcgc
tgctcagctctgagtgatccttctcaggacctgcagttcattgtggctggggatgagtgt
gtctacctttaccagcctgatgaacgtggaccctgctttgccttcgagggccataagctc
attgcccactggtttagaggctaccttgtcattgtctcccgtgaccggaaggtttctccc
aagtcagagtttaccagcagggactcacagagctccgacaagcagatcctcaacatctat
gacctgtgcaacaagttcatagcctatagtgctgtctttgaggatgtagtggatgtgctt
gctgagtggggctccctgtacgtgctgacacgcgatggacgtgtccatgcactgcaggag
aaggacacacagaccaaactggagatgctgtttaagaagaacctatttgagatggcaatt
aacctggctaagagccaacatctggacagtgatgggctggcccagatcttcatgcagtat
ggagaccatctctacagcaagggaaaccatgatggggctgtccagcagtatatccgaacc
attggaaagttggagccatcctatgtgatccgcaagtttctggatgcccagcgcatccac
aacctgactgcctacctgcagaccctgcaccgacaatccttggctaatgcagaccatacc
accctgctcctgaactgctatacgaagctcaaggacagctcaaagttggaggagttcatc
aagacaaagagtgagagtgaagtccactttgatgtggagacagccatcaaggtcctccgg
caggctggctactactcccatgccctctatctggctgagaaccatgcacatcatgagtgg
tacttaaagatccagctggaggatattaagaattatcaggaagcccttcggtacattggc
aagttgccttttgagcaggcagagagcaacatgaagcgctatggcaagaccctcatgcac
cacataccagagcagacgactcagttgctaaaaggactttgtactgattatcggcccagc
ttggatggccgaggggataaggagactccaggctaccgggccaactctgaggagtttatc
cccatctttgcaaacaacccccgagagctgaaagccttcctggagcacatgagtgaagtg
cagccagactcaccccagggcatttatgacacactccttgagctgcggctgcagaactgg
gcccatgagaaagatccacaggtcaaagagaagcttcatgcagaggccatctccctcctg
aagagtggccgcttctgtgacgtctttgacaaggcactggtcctgtgccagatgcatgac
ttccaggatggggtcctttacctctatgagcaggggaagctgttccagcagattatgcat
taccacatgcagcacgagcagtaccggcaggtgattgcagtgtgtgagcgccatggggag
caggacccctccctgtgggaacaggccctcagctacttcgcccgaaaggaggaggactgt
aaggagtatatggcagctgtgctcaaacatattgagaacaagaacctcatgccacccctt
ctagttgtacagaccctggcccacaactctacagccaccttatcagttatcagagactac
ctagtccaaaaactgcagaaacagagccagcagattgcccaagatgagcttagggtgcgg
cggtaccgagaggagaccacccgcatccgccaggagatccaagagctcaaggcgagtcca
aagatcttccagaagaccaagtgcagcatctgtaacagtgccttggaattgccctctgtc
cacttcctatgtggccactccttccaccagcactgctttgagagttactcagagagtgat
gctgactgccccacctgcctccctgaaaaccggaaggtcatggatatgatccgggcccag
gaacagaaacgagatctccatgatcagttccagcaccagctcaagtgctccaacgatagc
ttctccgtgattgctgactactttggccgaggggttttcaacaagttgactctgctgact
gaccctcccacagccagactcacccccagcctggaggctgggctgcagcgggacctgctc
atgcactccagaaggggcacttaa
DBGET
integrated database retrieval system
