Castor canadensis (American beaver): 109693735
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Entry
109693735 CDS
T04791
Symbol
Samhd1
Name
(RefSeq) deoxynucleoside triphosphate triphosphohydrolase SAMHD1
KO
K22544
deoxynucleoside triphosphate triphosphohydrolase SAMHD1 [EC:3.1.5.-]
Organism
ccan
Castor canadensis (American beaver)
Pathway
ccan03250
Viral life cycle - HIV-1
ccan04623
Cytosolic DNA-sensing pathway
ccan05170
Human immunodeficiency virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ccan00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
109693735 (Samhd1)
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
109693735 (Samhd1)
09160 Human Diseases
09172 Infectious disease: viral
05170 Human immunodeficiency virus 1 infection
109693735 (Samhd1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ccan03400
]
109693735 (Samhd1)
DNA repair and recombination proteins [BR:
ccan03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
109693735 (Samhd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SAM_2
SAM_1
HD
HD_assoc_2
PDEase_I
SAM_Ste50p
Motif
Other DBs
NCBI-GeneID:
109693735
NCBI-ProteinID:
XP_020030850
UniProt:
A0A250Y3J9
LinkDB
All DBs
Position
Unknown
AA seq
623 aa
AA seq
DB search
MRRADCEQPPKRPRCDGSPRTPPNTPPEVADESPGPELHPDHQTWDPEQVCSFLESRGFK
EPGLLRSFRENKITGSLLPFLDESLLENLGVSSFGERKKLLYYIQQLSQTHIEIMKVIND
PIHGHIELHPLLIRIIDTPQFQRLRYIKQLGGGYYVFPGASHNRFEHSLGVGYLAGCLVR
ALCEKQPELQISERDMLCVQIAGLCHDLGHGPFSHMFDGRFIPLARPEVKWTHEQGSVHM
FEHLVNSNGLKDVMEHYGLVPEEDICFIKEQITGPLDSPTKDSSWPYKGRPKEKSFLYEI
VANKRNGIDVDKWDYFARDCHHLGIQNNFDYKRFIKFARVCEVGNRKHICTREKEVGNLY
DMFHTRNCLHRRAYQHKVGNIIDTMITDAFLKADPYIEIQGAEGKKYRISTAIDDMEAFT
KLTDNIFLEILYSTDPKLSVAQEILRNIEYRNLYKYVGETQPGKKEKIQKENYEGLPKEV
ANAKPKEILLEVELKAEDFIVDVINMDYGMKDKNPIDHVHFYCKSDSRKAIKISKDQVSQ
LLPERFAEQLIRVYCKKTDEKSLYAARQHFVHWCLIKDFTKPQDGDIVAPLITPLKKEWN
NKESAHSPTRLREASKFKTQLKF
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atgcgtagagccgactgcgagcagccccctaagcggccccgatgtgatggcagcccgaga
acaccaccaaatactcctcccgaagtggcggacgagtcaccgggcccggaactccaccct
gaccaccagacttgggacccggagcaggtgtgctccttcttagagagcagaggcttcaag
gagccaggactgctgaggagcttccgagaaaataagatcacaggttcattactgcccttt
ctcgatgagtctcttcttgaaaatcttggagtaagctcctttggggagaggaagaagctg
ctttattatatccaacagttgagtcaaactcacattgagataatgaaggtaattaatgat
cctatccatggccacattgagctccaccctctccttatccgaatcattgatacacctcag
tttcagcgacttcggtatattaaacagctgggaggcggttattatgtttttccaggagct
tcacacaatcgatttgaacatagcctaggggtaggttatctagcaggatgtctagttcgt
gcactgtgtgaaaagcaaccagagctgcagataagcgagcgagatatgctctgtgttcag
atagcggggctttgccatgatctcggtcatgggccattttctcatatgtttgatggaaga
tttatcccacttgctcgcccagaagtgaagtggacgcacgaacagggctcagtccacatg
tttgagcatctcgttaattctaatggactcaaggatgtcatggagcactatggtcttgtc
cccgaggaagacatttgctttatcaaggaacaaattacaggaccacttgattcaccaacc
aaagactcttcgtggccatataaaggacgtcctaaagagaagagcttcctttatgagata
gtggctaataaaagaaatggcattgatgtggataaatgggattattttgccagggactgc
catcatcttggaatccaaaataattttgactacaagcgttttattaagtttgcccgtgtc
tgtgaagtgggaaataggaaacatatttgcactagagaaaaggaggttggaaacctgtat
gacatgttccacactcgcaactgtctgcaccgcagagcctatcagcacaaggttggcaac
atcatcgacacgatgattacagatgccttcctcaaagcagacccctacatagaaatccaa
ggtgctgaagggaaaaagtatcgaatttctacagcaatcgacgacatggaagccttcact
aagctcacagataacatttttctggagattttgtattctactgatcccaaactgagtgtt
gcacaggagattttaagaaatattgaatatcgtaatctatacaagtatgtgggtgagacc
cagccagggaagaaagaaaagatccaaaaggaaaactatgaaggccttccaaaagaggtg
gccaatgctaaacctaaggaaatattactggaagttgaactgaaggccgaagatttcata
gtggatgttatcaacatggattatggaatgaaagacaagaatccgattgatcatgtccac
ttctactgtaagagcgactccagaaaagcaatcaagattagcaaagaccaggtttcacag
cttctgccagagagatttgcagagcagctgattcgtgtatattgtaagaagacagatgaa
aagagtttgtatgctgctagacagcactttgttcattggtgcctgatcaaagacttcacc
aagccgcaggatggtgatatcgtagcccctcttatcacacctctgaaaaaggagtggaac
aacaaggagtcagcccacagcccaactcgtttacgagaagcctccaaattcaaaacccag
cttaaattttaa
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