Castor canadensis (American beaver): 109693736
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Entry
109693736 CDS
T04791
Symbol
Soga1
Name
(RefSeq) protein SOGA1
KO
K27704
microtubule cross-linking factor
Organism
ccan
Castor canadensis (American beaver)
Brite
KEGG Orthology (KO) [BR:
ccan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ccan03036
]
109693736 (Soga1)
Chromosome and associated proteins [BR:
ccan03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
109693736 (Soga1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SOGA
SOGA1-2-like_CC
Motif
Other DBs
NCBI-GeneID:
109693736
NCBI-ProteinID:
XP_020030851
UniProt:
A0A8C0XUP3
LinkDB
All DBs
Position
Unknown
AA seq
1649 aa
AA seq
DB search
MEAPAGELPARGCGPPPAPAPERKKSHRAPSPARPKDVAGWSLAKGRRGPGPGAAAACSA
ASSTRPDKKGRAVAPGARGAGPRVAGVRTGVRAKGRPRPGAGPRPPPPPPSLTDSSSEVS
DCASEEARLLGLELALSSDAESAAGGPAGARTGQQPQPAPSAQQPPRPPASPDEPSVTAS
SVGSSRLPLSASLAFSDLTEEMLDCGPGGFVRELEELRSENDYLKDEIEELRAEMLEMRD
VYMEEDVYQLQELRQQLDQASKTCRILQYRLRKAERRSLRAAQTGQVDGELIRGLEQDVK
VSKDISMRLHKELEVVEKKRARLEEENEELRQRLIETELAKQVLQTELERPREHSLKKRG
TRSLGKTDKKPSAQEDSADLKCQLHFAKEESALMCKKLTKLAKENDSMKEELLKYRSLYG
DLDAALSAEELADAPHSRETELKVHLKLVEEEANLLSRRIVELEVENRGLRAEMDDMKDH
GGSCGGPEARLAFSVLGSSGGGECGESLAELRRHLQFVEEEAELLRRSSAELEDQNKLLL
SELAKYRSEHELDVTLSEDSCSVLSEPSQEELAAAKLQIGELSGKVKKLQYENRVLLSNL
QRCDLASCQSTRPMLETDAEAGDSAQCVPAPLSEAHEPHAARLCRTRDTEALPGLREQAI
LVSKAIDVLVADANGFSAGLRLCLDNECADFRLHEAPDNSEGPRDTKLIHAILVRLSMLQ
QELNTFARKADVVLGGSGKEQPEPFSTLPSLGSQGPSKEIILAKDLGSDFQPSDFRDLPE
WEPRIREAFRTGDLDSKPDPGRSFRSYRAEDNDSYASEIKELQLVLAEAHDSLRGLQEQL
SQERQLRKEEADNFNQKMVQLKEDQQRALLRREFELQSLSLQRRLEQKFWSQEKNTLVQE
SQQFKHNFLLLFMKLRWFLKRWRQGKVLPSEGDDFLEVNSMKELYLLMEEEEINAQHPDN
KACTGDSWTQNTPSEDIKTLADMKVTLKELCWLLRDERRGLTELQQQFAKAKATWETERA
ELKSHAAQIELKAGKGALQREREEQQHLLAESYSAVMELTRQLQVSERNWSQEKLQLLER
LQGEKQRVEQQVKDLQNRLSQLQKAAEPWVLKHADLEKQDNSWKETRSEKIHDKEAGSEA
ELGGTGLKRTKSVSSMSEFESLLDCSPYLAGGDARGKKLPNSPAFTFVGSEPVEPEKDTK
EKPGLLPRGCSRLGSLACQDPAGKQMQRSYTAPDKTGIRVYYSPPVARRLGVPVVHDKEG
KVLIEPGFLFTTAKPKESTEADGLADSAYGRWLCNFSRQRLDGGSGGSPSAAGPAFPAAL
HDFEMSGNMSDDMKEITNCVRQAMRSGSLERKVKSTSSQTVGLASVGTQTIRTVSVGLQT
DPPRSSLHGKSWSPRSSSLVSVRSKQISSSLDKVHSRIERPCCSPKYGSPKLQRRSVSKL
DNTKDRSLWNLHQGKQNGSAWARSTTTRDSPVLRNINDGLSSLFSVVEHSGSTESVWKLG
MSEARVKPEPPKYGLVQEFFRNVCGRAPSPTSVVGEESSKKPEPLSPASYHQPEGVIRIL
NKKAAKSGCSEEARPTIALQVGKDGVLRDGDGASVLPNEDAVCDCSAQSLASCFARPSRS
AIRHSPSKCRLHPSESGWGVEERAVPPSE
NT seq
4950 nt
NT seq
+upstream
nt +downstream
nt
atggaggcgccggcgggggaactcccggcgcggggctgcggccccccgcccgcgcccgcc
ccagagaggaagaagagccaccgcgcgccgtcgccagcccggcccaaggacgtggccggc
tggtctctggccaagggccgccgcggcccaggcccgggcgccgctgccgcctgtagcgcc
gcgtcctcaacgcggccggacaagaaggggcgcgcggtggcgcccggagcgcggggcgca
gggccgcgggtggctggggtccgcaccggggtgcgcgccaaaggccgtccgcgcccgggt
gcggggccgcgaccgcctccaccgcctcccagcctcacggacagcagctccgaggtgtcc
gactgcgcgtcggaggaggcgcgcctgttgggcctggagctggcgctgagcagcgatgcc
gagtcggcggccgggggcccggcgggagcccgcaccgggcagcagccccagcccgcgcca
tccgcgcagcagcctccgcggccgcctgcttccccggatgagccgtcggtgaccgcgtcg
tcggtgggcagcagccgcctgccgctcagtgcctcgctcgccttctccgacctcaccgag
gagatgctggactgcgggcccggcggcttcgtgcgcgagctggaggagctgcgctccgag
aacgactatctcaaggatgagatcgaggagctacgggcagagatgctggagatgcgggat
gtgtacatggaggaggatgtataccagctgcaggagttacggcagcagctggaccaggcc
agcaagacttgccgcatcctgcagtaccgactgcgcaaagccgagcgccgcagcctccgt
gctgcccagactggccaggtggacggcgagctcatccgaggtctggagcaggatgtcaag
gtctctaaggacatctccatgaggctgcacaaggagcttgaggtggtggagaagaagagg
gcacggctggaggaggagaatgaggagcttcggcagcggctcatcgagacggagctggcc
aagcaggtgctgcagaccgagctggagcggccgagagagcattccttgaagaaaagagga
acccgctccctggggaagacagataagaagccttctgcacaggaggacagtgcggacctg
aaatgccagctgcactttgcaaaggaggagtcggccctcatgtgcaagaagctcaccaag
ctagccaaggagaacgacagcatgaaggaggagctgctcaagtaccgctcgctctatggt
gacctggacgctgccctgtccgcggaggaactggcggacgcccctcactccagggagacc
gagctcaaggtacacctgaagctggtggaggaagaggccaacctgcttagccgccgcatt
gtggagctggaagtggagaaccggggcctgcgcgccgagatggatgacatgaaggatcac
ggtggcagctgcggagggccggaggcccggctggccttctctgtgctgggcagcagtggt
ggcggcgagtgtggggagagcctggcggagctgcggcgacacctgcagttcgtggaagag
gaggccgagctgctacgccgctcctccgccgagctggaggaccagaacaagttgttgctg
agcgagctggccaagtaccgctccgagcacgagctggacgtgacgctgtcggaggacagc
tgctcggtgctgagcgagccgtcgcaggaggagctggctgcggccaagctgcagatcggc
gagctcagcggcaaagtcaagaagctgcagtacgagaaccgcgtgctcctctccaacctg
cagcgctgcgacctcgcctcctgccagagcacacgccccatgctggagacggacgccgag
gctggggactctgcccagtgtgtgcccgcgccgctgagcgaggcccacgagccccacgcc
gcccggctctgcaggacccgcgacactgaggcgctgcccgggctgcgggagcaggccatc
ctggtcagtaaagccattgatgtcctggtggctgatgccaatggcttctcggctggccta
cggctgtgcctggacaacgagtgtgctgactttcggctgcatgaggcccctgacaacagt
gaggggcccagggacactaagcttatccatgccatcctggtgcggctgagcatgctccag
caggagctcaacacctttgcacgaaaggcagatgtggtcctggggggctctggcaaggag
cagccagagcccttctccacgctgccctccttgggctcccagggaccctccaaagagatc
atcctagccaaggaccttggctcagacttccagccgtctgactttagggacctgccggaa
tgggagcccaggatccgagaggcctttcgcactggtgacttggactccaagcctgatccc
ggtaggagcttcaggtcttaccgagctgaagacaatgattcctatgcctctgagatcaag
gagctgcaattggtgctggccgaggcccatgacagcctccggggcctgcaagagcagctg
tcacaggagcggcagctgcgcaaggaggaggccgacaacttcaaccagaaaatggtccag
ctgaaggaggaccagcagagggcactgctgaggcgggagttcgagctgcagagtctgagc
ctgcagagaaggctggagcagaagttctggagccaggagaagaacacgctggtgcaggag
tcccagcagttcaagcataacttcctgctgctcttcatgaagctcaggtggttcctgaag
cgctggcggcagggcaaagtcttgcccagtgagggggatgacttcctggaggtaaacagc
atgaaggaactgtatctgcttatggaggaagaggagataaatgcccagcatccagataac
aaggcctgcacgggggacagctggacccagaacacgcccagtgaggacatcaagacgctg
gctgacatgaaggtgacgctgaaggagctgtgctggctgctccgggacgagcgccgaggt
ctgaccgagcttcagcagcagtttgccaaggccaaggccacctgggagactgagcgggct
gagctcaagagccatgctgcccagatagagctgaaggctgggaagggtgccctgcagagg
gagcgggaggagcagcagcacctcctggctgagtcctacagtgcagtcatggagctgacg
cgccagctgcaggtcagcgagcgcaactggagccaggagaagctgcagcttctggagcgg
cttcagggtgagaagcagcgagtggagcagcaggtgaaggatctccagaaccgcctcagc
cagcttcagaaggctgctgagccctgggtcctgaaacacgcagacctggagaagcaggac
aacagctggaaagagacgcgcagcgagaagatccacgacaaggaggctgggtctgaagcc
gaacttgggggaactggcttaaagaggaccaagtctgtttcctccatgtctgagttcgaa
agcttgctggactgttccccttaccttgctggtggagatgcccggggcaagaagctgccc
aacagccctgcctttactttcgttggtagcgagccggtggagccagaaaaagacaccaag
gaaaagcctgggctcctaccacggggctgcagccgcctgggctccctggcctgccaggac
cctgcagggaagcagatgcaacgcagctatacagctccggacaagacaggcatccgcgtc
tactacagccccccagtggcccgacgcctgggtgtccctgtggtccatgacaaggagggc
aaggtcctcattgaacctggctttctcttcaccacagccaaacccaaagagtcaactgag
gccgatgggctggctgacagcgcctatggccggtggctctgcaatttctcccggcagcgc
ctggatggaggctctgggggcagcccatctgcggctgggcctgcctttccagcggccctg
catgactttgagatgtcaggcaacatgagcgatgacatgaaggagatcaccaattgtgtg
cgacaggccatgcgctcgggctcgctggagaggaaagtgaagagtacatccagccagacg
gtgggcctggccagcgtggggacgcagaccatccgcacggtcagtgtgggcctgcagact
gacccaccacgcagcagcctccacggcaagagctggtcaccccgcagctcctcgcttgtg
tccgtgcgcagcaagcagatctcctcctccctggacaaggtccactcgcgcatcgaacgg
ccctgctgctccccgaagtacggctcaccaaagctgcagaggcgatccgtgtctaagctg
gataacaccaaggaccgcagcctgtggaacctgcaccagggcaagcagaatggctcagcg
tgggcccgttctaccaccacacgggacagccccgtgctgaggaacatcaacgatgggctg
tccagcctcttcagtgtggtggagcattcagggagcactgagtctgtctggaaactgggc
atgtctgaggcccgggtcaagcccgagcctcctaagtatggcctcgtgcaggagttcttc
cgtaatgtgtgtggccgggcaccaagccctacctcggtggtgggagaggagagctctaag
aagccagagcccctctcacctgccagctaccatcagccagagggcgtgatcaggatcctg
aacaagaaggcagccaagtcaggctgcagcgaggaggccagacccaccatcgctctccag
gtggggaaggatggtgtccttcgggatggagacggagcctctgtccttcccaatgaggac
gctgtttgtgactgcagtgctcagtctctcgcctcctgctttgcccggccatcccgctct
gccatccgccattcaccttccaagtgcaggctgcacccttccgagtctggttggggtgtg
gaggagagggcagtcccccccagcgagtga
DBGET
integrated database retrieval system