Castor canadensis (American beaver): 109693755
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Entry
109693755 CDS
T04791
Symbol
Vps4b
Name
(RefSeq) vacuolar protein sorting-associated protein 4B
KO
K12196
vacuolar protein-sorting-associated protein 4
Organism
ccan
Castor canadensis (American beaver)
Pathway
ccan03250
Viral life cycle - HIV-1
ccan03272
Virion - Hepatitis viruses
ccan04144
Endocytosis
ccan04217
Necroptosis
Brite
KEGG Orthology (KO) [BR:
ccan00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
109693755 (Vps4b)
03272 Virion - Hepatitis viruses
109693755 (Vps4b)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
109693755 (Vps4b)
09143 Cell growth and death
04217 Necroptosis
109693755 (Vps4b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccan04131
]
109693755 (Vps4b)
03400 DNA repair and recombination proteins [BR:
ccan03400
]
109693755 (Vps4b)
Membrane trafficking [BR:
ccan04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-III complex
109693755 (Vps4b)
DNA repair and recombination proteins [BR:
ccan03400
]
Eukaryotic type
Check point factors
Other check point factors
109693755 (Vps4b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
Vps4_C
MIT
AAA_lid_3
AAA_16
TIP49
AAA_14
AAA_5
RuvB_N
AAA_22
AAA_25
IstB_IS21
AAA_18
DUF815
AAA_2
nSTAND3
NPHP3_N
RNA_helicase
AAA_33
PhoH
AAA_24
AAA_17
AAA_7
nSTAND_NTPase5
Mg_chelatase
ResIII
NACHT
Parvo_NS1
AAA_28
Csx12
bpMoxR
ABC_tran
Motif
Other DBs
NCBI-GeneID:
109693755
NCBI-ProteinID:
XP_020030887
UniProt:
A0A8B7VHD5
LinkDB
All DBs
Position
Unknown
AA seq
444 aa
AA seq
DB search
MASTGSNLQKAIDLASKAAQEDKARNYEEALQLYQHAVQYFLHVVKYEAQGDKAKQSIRA
KCAEYLDRAEKLKEYLKKKEKKPQKPVKEGQPSPADEKGNDSDGEGESDDPEKKKLQNQL
QGAIVIERPNVKWSDVAGLEGAKEALKEAVILPIKFPHLFTGKRTPWRGILLFGPPGTGK
SYLAKAVATEANNSTFFSISSSDLVSKWLGESEKLVKNLFQLARENKPSIIFIDEIDSLC
GSRSENESEAARRIKTEFLVQMQGVGVDNDGILVLGATNIPWVLDSAIRRRFEKRIYIPL
PEAHARAAMFKLHLGSTQNSLKEVDFQELGRKTEGYSGADISIIVRDALMQPVRKVQSAT
HFKKVQGPSRADPNATVDDLLTPCSPGDPGAIEMTWMDVPGDKLLEPVVSMWDMLRSLSS
TKPTVNEQDLLKLKKFTEDFGQEG
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atggcatctactgggtccaacctccagaaagcaatagatcttgctagcaaagcagcacag
gaagacaaagccaggaactatgaggaagcccttcagctctaccagcatgctgtacagtat
tttctccatgtagttaaatatgaagcacaaggcgataaagccaagcagagtatcagggcc
aagtgtgcagagtatcttgacagagcagaaaaactaaaggagtatctgaagaaaaaggag
aaaaaaccacaaaagccagtgaaagagggtcagccaagtccagctgatgagaaggggaat
gacagtgatggggaaggagaatctgatgatcctgaaaaaaagaaactacagaatcaactt
caaggtgccattgttatagagagaccaaatgtgaaatggagtgatgttgctggtcttgaa
ggagccaaagaagcacttaaagaggcggtgatattgcctattaaatttcctcatcttttt
acgggcaagaggacaccttggcgaggaatcctattatttgggccacctggaacaggaaaa
tcctatttagccaaagctgtagcaacagaagcaaataactcgacatttttttcaatatct
tcctctgaccttgtttctaagtggctaggtgaaagtgaaaaattggttaagaacttattc
caacttgccagagagaacaagccttcaattatctttattgatgaaattgactctctgtgt
ggttcaaggagtgaaaatgaaagtgaagctgcacgtagaattaagacagagtttctagtt
caaatgcaaggggttggtgtggacaatgatggaattttggttctgggagctacaaatata
ccctgggttctggattctgccattaggcgaagatttgagaagcgaatttatattcctttg
ccggaagcacatgctcgagcagcaatgtttaaattgcacttgggcagcactcagaacagt
ttgaaagaagtagacttccaggaacttgggaggaaaactgaaggctattcaggagcagat
ataagtatcattgtacgtgatgcacttatgcagcctgttagaaaagttcagtcagctact
catttcaaaaaggttcagggaccttcccgagctgatcctaatgccactgtagatgacctg
ctgacaccctgctctccaggggaccctggtgccattgaaatgacgtggatggatgtccct
ggagataaacttttggagccagttgtttccatgtgggatatgctgcggtccctgtctagc
acaaaacccacagtcaatgaacaagacttgttgaaattaaagaagtttacagaagatttt
ggacaagagggctga
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