Castor canadensis (American beaver): 109693843 Help Entry 109693843         CDS       T04791                                  Symbol Nxf1 Name (RefSeq) nuclear RNA export factor 1   KO K14284   nuclear RNA export factor Organism ccan  Castor canadensis (American beaver) Pathway ccan03008   Ribosome biogenesis in eukaryotes ccan03013   Nucleocytoplasmic transport ccan03015   mRNA surveillance pathway ccan05014   Amyotrophic lateral sclerosis ccan05164   Influenza A ccan05168   Herpes simplex virus 1 infection Brite KEGG Orthology (KO) [BR:ccan00001]  09120 Genetic Information Processing   09122 Translation    03013 Nucleocytoplasmic transport     109693843 (Nxf1)    03015 mRNA surveillance pathway     109693843 (Nxf1)    03008 Ribosome biogenesis in eukaryotes     109693843 (Nxf1)  09160 Human Diseases   09172 Infectious disease: viral    05164 Influenza A     109693843 (Nxf1)    05168 Herpes simplex virus 1 infection     109693843 (Nxf1)   09164 Neurodegenerative disease    05014 Amyotrophic lateral sclerosis     109693843 (Nxf1)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:ccan03019]     109693843 (Nxf1)    03009 Ribosome biogenesis [BR:ccan03009]     109693843 (Nxf1) Messenger RNA biogenesis [BR:ccan03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     Nuclear pore complex      109693843 (Nxf1)    mRNA cycle factors     Stress granule specific factors      109693843 (Nxf1) Ribosome biogenesis [BR:ccan03009]  Eukaryotic type   Pre-60S particles    Export and cytoplasmic maturation factors     109693843 (Nxf1) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  LRR_NXF1-5 NXF_NTF2 Tap-RNA_bind TAP_C NTF2 LRR_8 LRR_4 UBA_8 LRR_9 Motif Other DBs NCBI-GeneID:  109693843 NCBI-ProteinID:  XP_020031017 UniProt:  A0A250Y3L3 LinkDB All DBs Position Unknown AA seq 619 aa AA seqDB search MADEGKSYNEHDDRVSFPQRRKKGRGPFRWKYGDGGNRRSGRGGSGIRSSRLEEDDGDVA MSDAQDGPRVRYNPYATRPNRRGDTWHDRDRIHVTVRRDRAPPERGGAGTSQDGTSKNWF KITIPYGRKYDKAWLLSMIQSKCSVPFTPVEFHYENTRAQFFVEDASTASALKAVNYKIQ DRENRRISIIINSSAPPHTVQNELKPEQVEQLKLIMSKRYDGSQQALDLKGLRSDPDLVA QNIDVVLNRRSCMAATLRIIEENIPELLSLNLSNNRLYKLDDMSSIVQKAPNLKILNLSG NELKSERELDKIKGLKLEELWLDGNSLCDTFRDQSTYISAIRERFPKLLRLDGHELPPPI AFDVEAPTMLPPCKGSYFGTENLKSLVLHFLQQYYAIYDSGDRQGLLDAYHDGACCSLSI PFIPQNPARSNLAEYFKDSRNVKKLKDPTLRFRLLKHTRLNVVAFLNELPKTQHDINSFV VDISAQTSTLLCFSVNGVFKEVDGKSRDSLRAFTRTFIAVPASNSGLCIVNDELFVRNAS PEEIQRAFAMPAPTPSSSPVPTLSPEQQEMLQAFSTQSGMNLEWSQKCLQDNNWDYTRSA QAFTHLKAKGEIPEVAFMK NT seq 1860 nt NT seq  +upstreamnt  +downstreamnt atggcggacgaagggaagtcgtacaacgagcatgacgaccgtgttagtttccctcagaga agaaagaaaggccggggtcctttccggtggaagtatggtgatggggggaaccgtcggtct ggaagaggcggttctggtattcgatcttcccggcttgaggaagatgatggagatgtggca atgagtgatgcacaggatggtccccgagtacgatacaacccttatgccactcgacctaat cgtcggggtgatacttggcatgatcgagaccgcattcatgttactgtacggagagacaga gctcccccagaaagaggaggagctggtaccagccaggatgggacctcaaagaactggttc aaaattacaattccttatggcagaaagtacgacaaggcatggctcctgagcatgattcag agcaaatgcagtgtccctttcacccctgttgagtttcattatgagaacacacgggcccag ttttttgtggaggatgccagtactgcttctgcattaaaggctgtcaactataaaattcag gatcgagagaaccgcagaatatctattatcatcaactcctctgctccaccccatactgta cagaatgaactgaagccagaacaagtagagcagctgaagctgatcatgagcaaacgatat gatggctcccaacaagcacttgacctcaagggcctccgttcagacccagatttggtggcc cagaacattgatgttgtcctgaatcgtagaagctgtatggcggctactctgcgaatcatt gaagagaacatccctgagctgttatccttgaacctgagcaacaacaggttatacaagctg gatgacatgtccagcattgtacagaaggcgcccaacctaaagatcctaaacctctccgga aatgaattgaagtctgagcgggagttggacaagataaaagggctgaagttggaagagctg tggcttgacggaaactccctgtgtgacaccttccgagaccagtccacctacatcagtgcc attcgcgagcgatttcccaagttactgcgcctggatggccatgagttacccccaccaatt gcctttgatgttgaagcccccacaatgttaccgccctgcaagggaagctattttggaaca gagaacctgaagagcttggtcctgcacttcctgcagcagtactatgcaatatatgactct ggagaccggcaaggcctccttgatgcctaccatgatggggcctgctgctcactgagcatt cctttcatcccccagaatcctgcccgaagcaacttggctgagtacttcaaggacagcaga aatgtgaagaagcttaaagatcccaccctacggttccgtctgctgaagcacacacggctc aatgttgttgccttcctcaatgagttgcccaaaactcagcatgacatcaattcctttgtg gtagacataagtgcccagacgagcacactgctgtgtttttctgttaatggggtcttcaag gaagtggatgggaagtctcgagattctttgcgagctttcaccaggacgttcattgctgtt cctgcaagcaattcagggttatgtattgtaaacgacgagctatttgtgcggaatgccagc cctgaagagatccaaagagcctttgccatgcctgcacctacaccttcatccagcccagtt cccactctctccccggagcagcaggaaatgttgcaggcattctctacccagtctggcatg aaccttgagtggtcccagaagtgccttcaggataacaactgggactacaccagatctgcc caggccttcactcatctcaaggccaagggtgagatcccagaagtggcgtttatgaagtga

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