Castor canadensis (American beaver): 109693849
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Entry
109693849 CDS
T04791
Symbol
Taf6l
Name
(RefSeq) TAF6-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 6L isoform X1
KO
K03131
transcription initiation factor TFIID subunit 6
Organism
ccan
Castor canadensis (American beaver)
Pathway
ccan03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
ccan00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
109693849 (Taf6l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccan03021
]
109693849 (Taf6l)
03036 Chromosome and associated proteins [BR:
ccan03036
]
109693849 (Taf6l)
Transcription machinery [BR:
ccan03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
109693849 (Taf6l)
Coactivators
SAGA/TFTC/STAGA complex
109693849 (Taf6l)
Chromosome and associated proteins [BR:
ccan03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
109693849 (Taf6l)
STAGA complex
109693849 (Taf6l)
TFTC complex
109693849 (Taf6l)
SAGA complex
109693849 (Taf6l)
SLIK complex
109693849 (Taf6l)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TAF6_C
TAF
Motif
Other DBs
NCBI-GeneID:
109693849
NCBI-ProteinID:
XP_020031027
UniProt:
A0A250Y3L0
LinkDB
All DBs
Position
Unknown
AA seq
627 aa
AA seq
DB search
MQSSTGAMSEREERRFVEIPRESVRLMAESTGLELSDEVAALLAEDVCYRLREATQNSSQ
FMKHTKRRKLTVEDFNRALRWSSVEAVCGYGSQEALPLRPVREGELYFPEDREVNLVELA
LATNIPKGSAETAVRVHVSYLDGKGNLAPQGSVPSAVSSLTDDLLKYYQQVTRAVLGDDP
QLMKVALQDLQTNSKIAALLPYFVYVVSGVKSVSHDLEQLHRLLQVARSLVRNPHLCLGP
YVRSLVGSVLYCVLEPLAASINPLNDHWTLRDGAALLLSHIFWTHGDLVSGLYQQILLSL
QKVLADPVRPLCSHYGAVVGLHALGWKAVERVLYPHLSTYWTNLQAVLDDYSVSNAQVKA
DGHKVYGAILVAVERLLKMKAQAAEPNRRGLRGRGLKRPDDLPWDSLLLQESPSGGAAEP
GFGAGLPLPPGGAGPEDPSPSVTLADIYQELYAFFGDSLATRFGTGQPAPTAPRPPGDKK
EPAAAPDSVRKMPQLTANAMVSPQGDESPRSGGGPPSASAPAASESRPLPRVHRARGAPR
QQGSGAGTRDVFQKSRFAPRGAPHFRFIIAGRQAGRRCRGRLFQTAFPAPYGPSPASRYV
QKLPMIGRTGRPARRWALSDYSLYLPL
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
atgcaaagctccactggggccatgtcggagcgagaagagcggcggtttgtggagattcct
cgggagtcggtccgtctcatggcagagagcacaggcctggagctgagcgatgaggtggca
gctctgcttgcagaggatgtgtgctaccgtcttagagaggccacacagaatagctctcag
ttcatgaagcacactaaacggcggaagctgacagtggaggacttcaacagggctctcaga
tggagcagtgtagaggctgtgtgtggttacgggtcccaggaggcattgcccttgcgtcct
gtcagggagggtgagctctattttcctgaagaccgagaggtgaacctggtggagctggca
ctggccaccaacatccccaaaggctctgctgagacggctgtcagagttcacgtctcctac
ctggatggcaaagggaacctggcacctcaaggttcagtgcccagtgcagtgtcttcactg
acagatgacctgctcaagtactatcagcaagtaacaagggctgtgctaggggatgatcca
cagctgatgaaggtggccctccaggatctgcagacgaactccaagattgcagcactcctg
ccttactttgtttatgtggtcagtggggtaaaatctgtaagccatgacttggagcagctg
caccgactgctgcaggtggcacgaagcctggttcggaacccacatctgtgcctggggccc
tatgtccgctccctggtgggcagtgtcctctactgtgtcctggagccattggctgcctcc
atcaaccctctgaatgaccactggactctgcgggatggggctgccctcctactcagccac
atattctggactcatggggaccttgtaagtggcctctatcagcaaatcctgctctccctg
cagaaggtcctggcagatcctgtgcggcctctctgctctcactatggcgcagtggtgggg
ctgcatgctcttggctggaaggcagtagaacgagtcctgtacccacacctatccacttac
tggacaaacttgcaagctgtgctggatgattattcggtatctaatgcccaggtcaaagca
gatgggcacaaagtctatggagccattctggtggccgtagagcgactgctgaagatgaag
gcgcaggcagcagagcccaaccgccgtggcctgcggggaagaggcctgaagcggccggat
gacctgccttgggacagccttctcctgcaggagtctccctccgggggtgctgccgagcca
ggctttggggctggcctcccgctgccgccagggggcgcggggccggaggacccttctcct
tccgtgaccctggctgacatctaccaggagctctacgcctttttcggtgacagtttggcc
acccgcttcggtaccggccaacccgcgcccacggccccgcggccgcccggggacaagaag
gagccagcagccgccccggactcggtgcggaaaatgccgcaactgacggccaatgccatg
gttagcccgcagggcgacgagagcccccggagcggtggcggacccccgtcggcctcggcg
cccgctgcctctgagagcaggccgctgcctcgcgtgcaccgggcgcggggagcgccccgg
cagcaaggctcgggcgccggcacccgcgacgtctttcagaagagccgttttgccccgcgc
ggcgccccccatttccgtttcatcattgccgggcggcaggccgggaggcggtgccgcggg
cgcctcttccagactgccttccccgcgccgtacgggcccagcccggcctcccgctacgtg
cagaagctgcccatgattggccgtactggccgcccggctcgccgctgggcgctctcggac
tactccctctacttgccgctgtga
DBGET
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