Castor canadensis (American beaver): 109694135
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Entry
109694135 CDS
T04791
Symbol
Ikbkap
Name
(RefSeq) elongator complex protein 1
KO
K11373
elongator complex protein 1
Organism
ccan
Castor canadensis (American beaver)
Brite
KEGG Orthology (KO) [BR:
ccan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ccan03016
]
109694135 (Ikbkap)
Transfer RNA biogenesis [BR:
ccan03016
]
Eukaryotic type
tRNA modification factors
Elongator complex
109694135 (Ikbkap)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_ELP1_1st
A-sol_ELP1
HB_ELP1
Beta-prop_ELP1_2nd
TPR_ELP1
TPR_GEMI5
Beta-prop_WDR35_TULP_N
Beta-prop_NUP159_NUP214
MMU163
Motif
Other DBs
NCBI-GeneID:
109694135
NCBI-ProteinID:
XP_020031483
UniProt:
A0A250YM53
LinkDB
All DBs
Position
Unknown
AA seq
1332 aa
AA seq
DB search
MRNLKLLRTLEFRDIQAPGKPQCFCLRAEQGTVLIGSEQGLIEADPLTREVKNEIPLVAE
GFLPEDGSGCIVGIQDLLDQESVCVATASGDVVLCNLSTHQLECVGSVASGISVMSWSPD
QELVLLATGQQTLIMMTRDFEPIMEQQIHQDDFGESKFITVGWGKKETQFHGSEGRQAAF
QMQMHESALPWDDHRPQVTWRGDGQFFAVSVVCPETGARKVRVWNREFALQSTSEPVAGL
GPALAWKPSGSLIASTQDKPNQQDVVFFEKNGLLHGHFTLPFLKDEVKVNNLLWNADSSV
LAVWLEDLQREENSTLKTYVQLWTVGNYHWYLKQSLPFSTTGKGKIVSLLWDLVTPYRLH
VLCQGWHYLCYDWHWTTDRSSGDYSSDLANVAVIDGNRVLVTVFRQTVIPPPMCTYQLLL
PHPVNQVAFSVHPEKSADLAVLDASNQISIYKCGDGLSVDPTVNLGAVGGNGFKVPLRIP
HLEKRYMIQLENSEDQEVNPLKLSLLTWIEEDIFLAISHSQSSPQSVIHHLTVVSSEMDE
EQGQLTVGSSVPVDGVIIGLCCSSKTKSLALQLADGQLLKYLWESPSLAFEPWKNPGGFP
VRFPYPCTQIELAMIGGEECVLGLTDRCRFFINDSEVASNITSFAVYDEFLLLTTHSHTC
QCFSLKDASFKTLQAGLSSNHVTNGEILRKVERGSRIVTVVPQDTKLILQMPRGNLEVVH
HRALVLAQIRKWLDKLMFKEAFECMRKLRINLNLIHDHNPKVFLENVETFIRQIDSVNHI
NLFFTELKEEDVTKTMYPPPAASNVQLSRDSEGKKLDLVCDAMRAAMENINPHKYCLSIL
TSHVKKTTPELEIVLQKVHELQGNVPAVPDAVSAEEALKYLLLLVDVNELYDHSLGTYDF
DLVLMVAEKSQKDPKEYLPFLNTLKKMETNYQRFTIDKYLKRYEKAIGHLSKCGPEYFSE
CLNLIKDKNLYKEALKLYPPNSQHYKAVSIAYGEHLIQEQLYEPAGLVFARCGAHEKALS
AFLTCGSWQQALCVAAQLHLSGDQLTGLGRTLAGKLVEQRKHNEAAIVLEQYAQDYEEAI
LLLLEGASWEEALRLVYKYNRLDIIETNVKPSILEAQKNYMVFLDSQTTTFICHKKRLLV
VRELKEQGQQVNLDDEVHLGQESDLFSETSSVVSGSEMSGKYSHSNSRISARSSKNRRKA
ERKKHSLKEGSPLEDLALLEALNEVVQSIEKLKDEVHSILKVLFLFEFDEQGRELQKAFE
DSLQLVERSLPEIWTLTYQQTSATPVLGPNSTANSIMASYQQQKTSVPVLDTEVFIPPKI
DRRNQWKLSLLE
NT seq
3999 nt
NT seq
+upstream
nt +downstream
nt
atgcgaaatctaaagttgcttcgcaccctggagttcagggacattcaagcaccagggaaa
cctcagtgcttctgtctccgagctgagcagggtacagtgctcattggctcggaacaggga
ctgattgaagcagatccgctcacaagagaagtgaaaaatgaaattcctttggtggcagaa
ggctttcttccagaggatggaagtggctgcattgttggtattcaggatttgctggaccag
gagtctgtgtgtgtggccacagcctctggagacgttgtactttgcaatctcagcacacat
cagctggaatgtgttgggagtgtggccagtggtatctctgtcatgagctggagtcctgac
caagaactggtgcttcttgctacaggtcaacagaccctaattatgatgacaagagacttt
gaaccaatcatggagcagcaaattcaccaggatgattttggcgaaagcaagtttatcact
gttggatggggcaagaaggagacacagttccatggatcagaaggcaggcaagcagccttt
cagatgcaaatgcatgagtctgctttgccatgggatgaccatagaccacaagttacctgg
cgtggggatggacagttttttgctgtgagtgttgtttgcccagaaacaggggctcggaag
gtcagagtatggaaccgagagtttgctttgcagtcaaccagtgagcctgtggcaggactg
ggacctgccctggcttggaaaccctcaggcagtttgattgcttctacacaagataaaccc
aaccaacaggatgttgtgttttttgagaaaaatggacttcttcatggacactttacactt
cctttcctcaaagatgaagttaaggtaaataacttgctctggaatgcagattcctctgtg
cttgctgtttggctggaagaccttcagagggaagaaaattccacactgaaaacctatgtt
cagctctggactgttggaaactatcactggtatctcaagcaaagcctgcccttcagcacc
actgggaagggcaagattgtgtctctgttgtgggatctggtgacaccataccgcctacat
gttctatgtcagggctggcattacctttgttatgactggcactggacgactgaccggagc
tcaggagattattcaagtgacttggcaaatgtggctgtcattgatggaaatagagtattg
gtgacagtcttccggcagactgtgattccacctcccatgtgcacctaccagctgctgctc
ccacacccagtcaatcaagttgcattctctgtacaccctgagaagagtgccgaccttgct
gtcctggatgccagcaaccagatctccatttataaatgtggtgatggtctgagtgtcgac
cccacagtgaacctgggagctgtgggtggaaatggatttaaagttcctcttagaatacct
catctggaaaagagatatatgattcagttggagaatagtgaagatcaagaagtaaaccca
ctgaagctcagtcttctcacctggattgaagaggacattttcctggcgattagccacagt
cagtctagcccgcagtctgtcattcaccatttgactgttgtctcttctgagatggatgag
gagcaaggacaactcactgtcggctcatctgtaccagtggatggggtcataattggtctg
tgttgcagttccaagaccaagtccttagcattacagctggctgatggccagctacttaag
tacctgtgggagtcaccttctctggcttttgaaccatggaagaaccctggtggatttcct
gttcgctttccttatccatgcacacaaatcgaattggccatgattggaggagaggaatgt
gtccttggtctgacagacaggtgtcgctttttcatcaatgacagtgaggttgcatcaaat
atcacatcatttgcagtatatgatgagtttttattgttgacaacccattcccatacctgc
cagtgtttttccctgaaggatgcttcatttaaaacattacaggcaggtctgtccagcaat
catgtgactaatggggaaattctgcggaaggtggagaggggttcacggattgtcacagtt
gtgccccaggacacaaagcttatattacagatgccaagagggaacttggaagttgttcat
catcgagccctggttttagctcagattcggaagtggttggacaaacttatgtttaaagaa
gcatttgaatgcatgagaaaactaagaattaatctcaatctgattcatgatcataacccc
aaggtgtttcttgaaaatgtggaaaccttcataagacagatagattctgtaaatcatatc
aatttgtttttcacagaactgaaggaagaagatgtcacaaagaccatgtaccctccacca
gctgccagcaatgttcagttgtccagggattcagaggggaaaaaacttgaccttgtctgt
gatgccatgagagcagccatggagaacatcaatcctcacaagtactgcctatcaatactc
acatcccatgtgaagaaaacaaccccagaactggaaattgtgctgcagaaggtacacgaa
cttcaaggaaatgttccagctgttcctgatgctgtgagtgcagaggaagccttgaaatat
ctactgcttctggtagatgttaatgaattgtacgaccattctcttgggacatatgacttt
gatttggtcctcatggtagctgagaagtcacagaaggatcccaaagaatatcttccattt
cttaatacgcttaagaaaatggaaactaattaccagcggttcactatagacaaatatttg
aagcggtatgaaaaagccattggccacctcagcaagtgtgggccagagtacttctcagaa
tgcctaaatctaataaaagataaaaacttgtataaggaagctctgaagttatacccgcca
aactcacagcactacaaggctgtcagcatcgcttatggggagcacctgattcaggagcag
ttgtatgagccagcagggcttgtgtttgcccgctgtggtgcccatgagaaggctctctct
gcctttctgacttgtggcagttggcagcaagcactctgtgtggcagcccagcttcacttg
tctggagaccagctgactggccttggtagaactctagcaggaaagctagttgagcagagg
aaacacaatgaagcagctatagttctggaacagtatgctcaggattatgaagaagctata
cttttgctgttagaaggagcttcctgggaagaagctctgaggctggtctacaaatataac
agactggatattatcgaaaccaatgtaaagccttccattttagaagcccagaaaaattac
atggtgtttctggactctcagacaacaacattcatttgccataaaaaacgcttactggtg
gttcgagagctcaaggagcaagggcagcaggtgaatctggatgatgaggtacaccttggt
caagagtcagacctcttctctgaaacgagcagtgttgtgagtggcagtgagatgagtggc
aaatattctcatagtaactccaggatatcagcgcgatcatctaaaaatcgtcgcaaagca
gagcggaagaagcacagcctcaaagaagggagtccactggaggatctggcccttttagag
gctttgaatgaagtggtacaaagcattgaaaagttgaaagatgaagtgcacagtatttta
aaggtacttttcctctttgagtttgatgagcaaggaagggaattacagaaggcctttgag
gattctctgcagctggtggaaagatcactcccagaaatctggactcttacataccagcag
acttcagccacacctgttctaggtccaaattccactgcaaatagtatcatggcctcatac
caacagcagaagacttcagttcctgttcttgatactgaagtttttataccaccaaagatc
gacagaagaaaccagtggaaactgagcctgctagagtga
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