Castor canadensis (American beaver): 109694858
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Entry
109694858 CDS
T04791
Symbol
Wipi2
Name
(RefSeq) WD repeat domain phosphoinositide-interacting protein 2 isoform X1
KO
K17908
autophagy-related protein 18
Organism
ccan
Castor canadensis (American beaver)
Pathway
ccan04136
Autophagy - other
ccan04140
Autophagy - animal
ccan05010
Alzheimer disease
ccan05014
Amyotrophic lateral sclerosis
ccan05016
Huntington disease
ccan05017
Spinocerebellar ataxia
ccan05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
ccan00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
109694858 (Wipi2)
04136 Autophagy - other
109694858 (Wipi2)
09160 Human Diseases
09164 Neurodegenerative disease
05010 Alzheimer disease
109694858 (Wipi2)
05014 Amyotrophic lateral sclerosis
109694858 (Wipi2)
05016 Huntington disease
109694858 (Wipi2)
05017 Spinocerebellar ataxia
109694858 (Wipi2)
05022 Pathways of neurodegeneration - multiple diseases
109694858 (Wipi2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccan04131
]
109694858 (Wipi2)
03029 Mitochondrial biogenesis [BR:
ccan03029
]
109694858 (Wipi2)
Membrane trafficking [BR:
ccan04131
]
Autophagy
Autophagosome formation proteins
Atg18-Atg2 complex
109694858 (Wipi2)
Mitochondrial biogenesis [BR:
ccan03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
109694858 (Wipi2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PROPPIN
Beta-prop_THOC3
WD40_CDC20-Fz
Beta-prop_WDR3_1st
Beta-prop_EML_2
Beta-prop_WDR5
WD40_Prp19
WD40
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
Beta-prop_WDR36-Utp21_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR90_POC16_2nd
DUF7165
WD40_Gbeta
Beta-prop_TEP1_2nd
BCAS3_WD40
Beta-prop_Vps41
RMC1_N
ELYS-bb
VID27
Motif
Other DBs
NCBI-GeneID:
109694858
NCBI-ProteinID:
XP_020032629
UniProt:
A0A8B7VN92
LinkDB
All DBs
Position
Unknown
AA seq
487 aa
AA seq
DB search
MNLASQSGEAGAGQLLFANFNQDNTAVNQRARAAGRRHPDFDWSLAVGSKSGYKFFSLSS
VDKLEQIYECTDTEDVCIVERLFSSSLVAIVSLKAPRKLKVCHFKKGTEICNYSYSNTIL
AVKLNRQRLIVCLEESLYIHNIRDMKVLHTIRETPPNPAGLCALSINNDNCYLAYPGSAS
IGEVQVFDTINLRAANMIPAHDSPLAALAFDASGSKLATASEKGTVIRVFSIPEGQKLFE
FRRGVKRCVSICSLAFSMDSMFLSASSNTETVHIFKLETVKEKPPEEPTTWTGYFGKVLM
ASTSYLPSQVTEMFNQGRAFATVRLPFCGHKNICSLTTIQKIPRLLVGASDGYLYMYNLD
PQEGGECALMRQHRLPCEMPSWKNPREQREVEYPQSIRLDGSMETTSEIVDSASHDCPLV
TQTYGTAAAKGAYLPSSPTRLGKGQDANLEAYTDDLGAVGGACLEDEASALRLDEDSEHP
PMILRTD
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgaacctggcgagccagagcggtgaggccggcgccggccagctgctgttcgccaacttc
aaccaggacaacacagcagtgaatcagagagcaagagcagctggtcgccgtcatcctgat
tttgactggtccctagctgttggtagtaagtccggttataaatttttctccctttcttct
gtggataagctggaacagatctatgaatgcactgacacggaagacgtgtgcatcgtggag
aggctgttctccagcagcctggtggccatcgtcagcctcaaagcgcccaggaagctgaag
gtctgccactttaagaaggggacggagatctgtaactacagctattccaacaccatcctg
gccgtgaagctcaataggcagaggctcatcgtgtgcctggaggagtcgctctacatacac
aacatccgggacatgaaggtgctgcacaccatcagggagacgcccccaaaccctgcaggc
ctgtgcgcactctccataaacaatgacaactgctacttggcgtacccagggagcgcgagc
atcggtgaagtgcaggtcttcgacaccatcaacttgagagcggcgaacatgatcccagct
cacgacagtcccttagctgcgctggcctttgacgcaagcggaagcaaacttgccactgct
tctgagaaggggaccgtaattagggtattttccattccagagggacagaaactctttgag
ttccggaggggagtgaagaggtgtgtgagcatctgctctctggccttcagcatggacagt
atgttcctctccgcgtccagcaacactgagacggtgcacatctttaaacttgagactgtg
aaagaaaaacctccagaggagcccactacctggacgggctactttgggaaggtgctcatg
gcctccaccagctacctgccctcccaggtgacagaaatgttcaaccaaggcagagccttt
gccaccgtccgcctgccattctgcggccacaagaacatctgctcattgaccacaattcag
aagattccccggttactggtgggagcatccgacggctacttgtacatgtacaacctggac
ccccaggagggcggcgagtgcgccctgatgcgccagcacagactcccgtgtgaaatgcca
tcgtggaaaaacccaagggagcagagggaggtggagtatcctcagagcataaggctggac
ggcagcatggagacaaccagtgagatcgtggactccgcctcccatgactgccccttagtg
acccagacgtacggcacagccgcagccaaaggtgcttacttgccctcgtcccccacaaga
cttggtaaggggcaggacgccaacctagaagcctacacagatgacttgggcgctgtgggc
ggtgcgtgcctggaagatgaagccagcgccctgcgcctggacgaagacagtgagcaccct
cccatgatcctccggactgactga
DBGET
integrated database retrieval system
