Castor canadensis (American beaver): 109695154
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Entry
109695154 CDS
T04791
Symbol
Ddx20
Name
(RefSeq) probable ATP-dependent RNA helicase DDX20 isoform X1
KO
K13131
ATP-dependent RNA helicase DDX20 [EC:
5.6.2.7
]
Organism
ccan
Castor canadensis (American beaver)
Brite
KEGG Orthology (KO) [BR:
ccan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ccan03041
]
109695154 (Ddx20)
Enzymes [BR:
ccan01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
109695154 (Ddx20)
Spliceosome [BR:
ccan03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
SMN complex factors
109695154 (Ddx20)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_30
Motif
Other DBs
NCBI-GeneID:
109695154
NCBI-ProteinID:
XP_020033127
UniProt:
A0A250Y5C0
LinkDB
All DBs
Position
Unknown
AA seq
822 aa
AA seq
DB search
MAAAFEAPAALETVDTVMPAKRVASSAEPTPEPIRSLRTAHDIGGPRTRTGDVLLAEPAD
FESLLLSRPVLEGLRAAGFERPSPVQLKAIPLGRCGLDLIVQAKSGTGKTCVFSTIALDS
LVLENYSTQILILAPTREIAVQIHSVITAIGIKMEGLECHVFIGGTPLSQDKIRLKKCHI
AVGSPGRIKQLIELDYLNPGSIRLFILDEADKLLEEGSFQEQINWIYSSLPASKQMLAVS
ATYPEFLANALTRYMRDPTFVRLNSSDPSLIGLKQYYKVVNAYPLTHKIFEDKAQHLQEL
FSRIPFNQALVFSNLHSRAQHLADILSSKGFPAECISGNMNQNQRLDAMAKLKQFHCRVL
ISTDLTSRGIDAEKVNLVVNLDVPLDWETYMHRIGRAGRFGTLGLTVTYCCRGEEENMMM
KIAQKCNINLLPLPDPIPPGLMEECLDWDVEVKAAMHTYGLASIPTQPPKKQIQKVERAF
QPQKIHSNHMTSSRHTSVSALPVQSKNTKQKLLAKSHSECGIREKATSPKEVGHAIQLEE
QTKNSVEPLVENSTSSQHRVKEALPGSLPQIPCLSSFKIHQPCTLTFAELVDDYDHYIKE
GLEKPVEIIRHYTGPGDQTVNPQNGFVRSRVSEDRVQILASSSQSGDSESDSDSYSSRTS
SQSKGNKSYLEGSSDTQLKDSESTPVDGHISLGQPLNGNNTSTPEECQESPEIQIKARHK
EGSNQRSKQSRRNLPKRSSYRLQTEPQADSWHDCHRETHPSFSDTYQDYEEYWRAYYRAW
QEYYAAASQSYYWNTQRHPSWMAAYHMNTVYLQEMMHGNQRL
NT seq
2469 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggcgtttgaagccccagcggccttagagacggtagacactgttatgccggcg
aagcgtgtagcctcatccgctgagcccactcctgagcccatacggagcttgcggacggct
cacgacatcggcggaccgcggacccgcaccggggacgtgctgctggcagagccggcggac
ttcgaatcgctgctgctgtcgcggccggtgctggaggggctgcgggcggccggcttcgag
aggccctcgccggtgcagctcaaggccatcccgctggggcgctgcgggctcgatttaatt
gttcaggctaagtctggcactggaaaaacctgtgtgttctccaccatcgctttggattct
cttgttcttgaaaactacagtacacagattttaatcctggctcctacaagagaaattgct
gtacaaatacattctgttatcacagccattggaataaaaatggaaggcttagagtgtcat
gtctttattggagggactccgttatcacaagacaaaatcaggcttaaaaagtgtcatatt
gctgttggatctcctggtagaattaagcaacttatagaacttgactacttgaatccaggt
agtatacgtctctttattcttgatgaagctgataagcttttagaagaaggcagctttcag
gagcaaataaattggatttattcttccttacctgccagtaaacagatgttggcagtatca
gctacttaccctgaatttttggctaatgctttgacaaggtatatgagagatcccaccttt
gtaagattgaattctagtgatccaagtctcataggtctgaagcaatattacaaagttgtc
aatgcataccctttaacccataagatttttgaggataaggctcagcatttacaggaactt
ttcagcagaattccatttaatcaagccttagtcttttctaatttgcacagcagagcacaa
catttggccgatatcctttcttctaaaggttttcctgctgagtgcatttcaggcaacatg
aatcagaatcagcgtcttgatgctatggctaaactgaagcagttccattgcagagttctc
atttctacagatttgacctctcgcggcattgatgctgagaaggtgaatctggttgtcaat
ttggacgtaccattggactgggagacgtacatgcatcggattggtagagctggccgtttt
ggtacattgggactgacagtgacctactgttgccggggagaagaagaaaatatgatgatg
aaaattgcccagaaatgtaacatcaaccttctccctttaccagatcccattcctcctggt
ctgatggaagaatgtttggattgggatgtggaggttaaagctgcgatgcatacttatggc
ttagcaagtataccaacccagcctccaaaaaagcaaattcaaaaagttgagagagccttt
caacctcagaaaattcatagtaaccacatgacttcctctagacatacttctgtgtctgca
ctcccagtccaatcaaaaaataccaaacaaaaacttcttgcgaaaagccactcagagtgt
ggaatcagagaaaaagcgacatcaccaaaagaagtggggcatgccatccaattggaagaa
cagacgaagaattctgttgagccccttgttgagaactccacaagcagtcagcatcgggtc
aaagaagctttacctgggtcactcccccaaattccttgtctgtcttcctttaaaattcat
cagccatgcactttgacttttgcagaactggtagacgattatgaccactatattaaagaa
gggttagagaaacctgtggaaatcatcagacactacacaggtcctggggatcagactgtg
aaccctcaaaatggctttgtgagaagtagagtttctgaagatagagtacagatactggca
agtagtagccaatctggagactcagagagtgacagtgattcttacagctcaaggacttcc
tcccagagcaaaggaaataagtcatacttggaaggctcttctgatactcagttgaaagac
tcagaatctactcctgtggatggccatatctctttgggacaacctctgaatggaaataac
acctctactccagaggaatgtcaagaatcacctgaaatccagataaaggcaagacataaa
gaggggtctaaccaaagatctaagcaaagccggagaaaccttcccaagcgctcttcctat
agattacagacagaaccccaggcagatagttggcatgactgtcatagggaaacacatccg
agtttttctgatacctaccaggattatgaggagtactggagagcttactatagggcatgg
caagaatattatgctgctgcctctcagtcatactattggaatactcagagacatccgagt
tggatggctgcctatcatatgaatacagtttatctacaagaaatgatgcatggtaaccag
cgattgtag
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