Castor canadensis (American beaver): 109695418
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Entry
109695418 CDS
T04791
Symbol
Smarcd1
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
ccan
Castor canadensis (American beaver)
Pathway
ccan03082
ATP-dependent chromatin remodeling
ccan04714
Thermogenesis
ccan05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
ccan00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
109695418 (Smarcd1)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
109695418 (Smarcd1)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
109695418 (Smarcd1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccan03021
]
109695418 (Smarcd1)
03036 Chromosome and associated proteins [BR:
ccan03036
]
109695418 (Smarcd1)
Transcription machinery [BR:
ccan03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
109695418 (Smarcd1)
Chromosome and associated proteins [BR:
ccan03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
109695418 (Smarcd1)
PBAF complex
109695418 (Smarcd1)
GBAF(ncBAF) complex
109695418 (Smarcd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIB
DivIC
Motif
Other DBs
NCBI-GeneID:
109695418
NCBI-ProteinID:
XP_020033540
UniProt:
A0A250Y299
LinkDB
All DBs
Position
Unknown
AA seq
515 aa
AA seq
DB search
MAARAGFQSVAPSGGAGASGGAGAAAALGPGGTPGPPVRMGPAPGQGLYRSPMPGAAYPR
PGMLPGSRMTPQGPSMGPPGYGGNPSVRPGLAQSGMDQSRKRPAPQQIQQVQQQAVQNRN
HNAKKKKMADKILPQRIRELVPESQAYMDLLAFERKLDQTIMRKRLDIQEALKRPIKQKR
KLRIFISNTFNPAKSDAEDGEGTVASWELRVEGRLLEDSALSKYDATKQKRKFSSFFKSL
VIELDKDLYGPDNHLVEWHRTATTQETDGFQVKRPGDVNVRCTVLLMLDYQPPQFKLDPR
LARLLGIHTQTRPVIIQALWQYIKTHKLQDPHEREFVICDKYLQQIFESQRMKFSEIPQR
LHALLMPPEPIIINHVISVDPNDQKKTACYDIDVEVDDTLKTQMNSFLLSTASQQEIATL
DNKIHETIETINQLKTQREFMLSFARDPQGFINDWLQSQCRDLKTMTDVVGNPEEERRAE
FYFQPWAQEAVCRYFYSKVQQRRQELEQALGIRNT
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atggcggcccgggcgggtttccagtctgtagctccgagcggcggggccggagcctcagga
ggggcgggcgcggcagctgctctgggcccgggcggaactcccggccctcctgtgcgaatg
ggcccggcgccgggtcaagggctgtaccgatccccgatgcccggggcggcctatccgaga
ccaggtatgctgccaggcagccgaatgacacctcagggaccttccatgggacctcctggc
tatggggggaacccttcagtccgacctggcctggcccagtcagggatggaccagtcccgc
aagagacctgcgcctcaacagatccagcaggtccagcagcaggcggtccaaaatcgaaac
cacaatgcaaagaaaaagaagatggctgacaaaattctacctcaaaggattcgtgaactg
gtaccagaatcccaggcctatatggatctcttggcttttgaaaggaaactggaccagact
atcatgaggaaacggctagatattcaggaggccttgaaacgtcccatcaagcaaaaacgg
aagcttcgaattttcatttctaacactttcaatccggctaagtcagatgccgaagatggg
gaagggacagtggcttcctgggagcttcgggtagaaggacggctcctggaggattcagcc
ttgtccaaatatgatgccacgaaacaaaagaggaaattctcttccttttttaagtccttg
gtgatcgaattggacaaagacctatatgggccagataaccatttggtagaatggcacagg
accgccactacccaggagactgatggcttccaggtgaagcggccaggagacgtgaatgta
cgatgtactgttctactgatgctggattaccagcctccccagtttaaattagaccctcgc
ctggctcggctcctgggcatccacacccagacccgtccagtgatcatccaagcactatgg
cagtatattaagacacataagctccaggaccctcatgagcgggaatttgtcatctgtgac
aagtacctccagcagatctttgaatctcaacgtatgaagttttcagagatccctcaacgg
ctgcatgccttgctcatgccaccagaacccattatcattaaccatgtcattagtgttgac
ccaaatgaccagaaaaagacagcttgttacgatattgatgtggaagtggatgataccttg
aagacccagatgaattcttttcttctgtccactgccagccaacaagagattgctacttta
gacaacaagatccatgagacaatagaaactatcaatcagctgaagacccagcgggagttc
atgctgagctttgccagagaccctcaggggttcatcaatgactggcttcagtcccagtgc
cgggacctcaagaccatgaccgatgtggtgggtaacccagaggaggagcgccgagctgag
ttctacttccagccttgggctcaggaagctgtgtgccgatacttctactccaaggtgcag
cagagacgacaagaattagagcaagccctgggaatccggaatacatag
DBGET
integrated database retrieval system
