Castor canadensis (American beaver): 109695440
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Entry
109695440 CDS
T04791
Symbol
Ddx39a
Name
(RefSeq) ATP-dependent RNA helicase DDX39A isoform X1
KO
K13182
ATP-dependent RNA helicase DDX39 [EC:
5.6.2.7
]
Organism
ccan
Castor canadensis (American beaver)
Brite
KEGG Orthology (KO) [BR:
ccan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ccan03041
]
109695440 (Ddx39a)
Enzymes [BR:
ccan01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
109695440 (Ddx39a)
Spliceosome [BR:
ccan03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
109695440 (Ddx39a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
109695440
NCBI-ProteinID:
XP_020033567
UniProt:
A0A8B7VPP1
LinkDB
All DBs
Position
Unknown
AA seq
429 aa
AA seq
DB search
MAMAEQDVENELLDYEEDEEPQAPQESTPAAPKKDIKGSYVSIHSSGFRDFLLKPELLRA
IVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQIEPAHGQVMVLVM
CHTRELAFQISKEYERFSKYMPSVKVSVFFGGLSIKKDEEVLKKNCPHVVVGTPGRILAL
VRNRSLNLKNVKHFVLDECDKMLEQLDMRRDVQEIFRLTPHEKQCMMFSATLSKEIRPVC
RKFMQDPMEVFVDDETKLTLHGLQQYYVKLKDSEKNRKLFDLLDVLEFNQVVIFVKSVQR
CMALAQLLVEQNFPAIAIHRGMAQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIV
FNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDENDAKILNDVQDRFEVNVAELPEEID
ISTYIEQSR
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atggccatggctgagcaggacgtggagaacgagcttttggattacgaggaggatgaagag
ccccaggctccccaggagagcaccccagctgcccccaagaaagacatcaaggggtcctat
gtgtccatccacagctcgggcttccgggacttcctgctgaagccggagctgctcagggcc
attgtggactgcggcttcgagcacccatcggaggtgcagcatgagtgcatcccccaggcc
atcctgggcatggacgtgctgtgccaggccaagtccgggatgggcaagaccgctgtgttc
gtgctggccaccctgcagcagatcgagcccgcccacggccaggtgatggtcctggtcatg
tgccacacgagggagctggccttccagatcagcaaggagtacgagcgcttctccaagtac
atgcccagtgtcaaggtgtcggtgttctttgggggcctgtctatcaagaaggacgaagaa
gtgttgaagaagaactgtccccacgttgtggtgggcaccccgggccgcatcctggcgctc
gtgcggaatcggagcctcaacctgaagaacgtgaagcactttgtgctcgacgagtgtgac
aagatgctagagcagctggacatgcggcgggacgtgcaggagatcttccgcctgacaccc
cacgagaagcagtgcatgatgtttagtgccaccctgagcaaggagatccggccggtctgc
aggaagttcatgcaggatcccatggaggtgtttgtggacgacgagaccaagctcacgctg
catgggctgcagcagtactacgtcaagctcaaggacagcgaaaagaaccgaaagctcttc
gacctcctggatgtgctggagtttaaccaggtggtgatcttcgtcaagtcggtgcagcgc
tgcatggccctggcccagctcctagtggagcagaacttcccggccatcgccatccaccgc
ggcatggcccaggaggagcgcctgtcgcgctaccagcagttcaaggacttccagcggcgg
atcctggtggccaccaatctgtttggccgagggatggacattgaacgcgtcaacatcgtc
ttcaactatgacatgccagaggactcggatacctacctccaccgagtggcccgtgccggc
cgctttggcaccaaaggcctggccatcacgtttgtgtctgatgagaacgatgccaaaatc
cttaatgacgtccaggaccgctttgaggtgaacgtggcagagcttccagaggaaattgac
atctccacgtacatcgagcagagccggtaa
DBGET
integrated database retrieval system
