Castor canadensis (American beaver): 109695584
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Entry
109695584 CDS
T04791
Symbol
Trub1
Name
(RefSeq) probable tRNA pseudouridine synthase 1
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
ccan
Castor canadensis (American beaver)
Brite
KEGG Orthology (KO) [BR:
ccan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ccan03016
]
109695584 (Trub1)
Enzymes [BR:
ccan01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
109695584 (Trub1)
Transfer RNA biogenesis [BR:
ccan03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
109695584 (Trub1)
Prokaryotic type
109695584 (Trub1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Pus10_C
Motif
Other DBs
NCBI-GeneID:
109695584
NCBI-ProteinID:
XP_020033782
UniProt:
A0A8B7VQ99
LinkDB
All DBs
Position
Unknown
AA seq
341 aa
AA seq
DB search
MAAAEAAVVSSSLIIDTAPVSEIAGTTAATAAAAVVAAAARTGAEPKVSKAAMATKLLSL
SGVFAVHKPKGPTSAELLNRLKEKLLAEAGMPSPEWTKRKKQTLKIGHGGTLDSAARGVL
VVGIGRGTKMLTSMLSGSKRYIAIGELGKATDTLDSTGKVTEEKPYDKITQEDIEGILQK
FTGNIMQVPPLYSALKKDGQRLSTLMKRGEVVEAKPARPVTVYSISLQKFQPPFFTLDVE
CGGGFYIRSLVSDIGKELSSCASVLELTRTKQGPFTLEEHALPEDKWTIDDIAQSLQHCS
SLLPADLALKKSKPEESNEQVLSCEYITLNETKGDDVIKTF
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atggcagctgctgaggcggcggtggtgtcgtcgtctttgataatagacacagccccagtt
tctgaaattgcaggaacaactgcagcaacggctgcagccgcggtggttgcggcggcggcc
aggaccggagccgaacccaaggtctccaaggccgctatggctactaagctgctgtccctt
agcggcgtgttcgcggtgcacaagcccaaagggcccacttcagccgagctgctgaatcgg
ttgaaggaaaagctgctggcagaagctgggatgccttctccagaatggaccaagaggaaa
aagcagactttgaaaattgggcatggagggactctagacagcgcagcccgaggtgttttg
gtggttggaattggaaggggaacaaaaatgttgaccagtatgttgtcagggtccaagagg
tacattgccattggagaactggggaaagctactgacacactagattctacagggaaagta
acagaagagaaaccctatgataaaataacacaagaagatattgaaggcattctacagaaa
tttactgggaatataatgcaagtacctcctctttattcggcattaaagaaagatggacag
agactttcaacgttaatgaagagaggtgaagtagtagaagccaaacctgccaggccagtt
actgtctacagtatctcgctacaaaaattccaaccaccgtttttcacgttagatgttgaa
tgtggaggtggtttttatatcagaagcttggttagtgacattggcaaagaactctcttcc
tgtgccagtgtactagagctgacccgaaccaaacaggggccatttacactagaagagcat
gccctccctgaagacaagtggacgattgatgatattgctcaatcccttcagcattgttca
tctcttctcccagcagacttggcacttaaaaaatcaaaacctgaggaatctaacgagcag
gttttgagctgtgaatatataactctaaatgagacaaaaggagatgatgtaattaagaca
ttttga
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