KEGG   Castor canadensis (American beaver): 109695584
Entry
109695584         CDS       T04791                                 
Symbol
Trub1
Name
(RefSeq) probable tRNA pseudouridine synthase 1
  KO
K03177  tRNA pseudouridine55 synthase [EC:5.4.99.25]
Organism
ccan  Castor canadensis (American beaver)
Brite
KEGG Orthology (KO) [BR:ccan00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:ccan03016]
    109695584 (Trub1)
Enzymes [BR:ccan01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.25  tRNA pseudouridine55 synthase
     109695584 (Trub1)
Transfer RNA biogenesis [BR:ccan03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    109695584 (Trub1)
 Prokaryotic type
    109695584 (Trub1)
SSDB
Motif
Pfam: TruB_N TruB_C_2 Pus10_C
Other DBs
NCBI-GeneID: 109695584
NCBI-ProteinID: XP_020033782
UniProt: A0A8B7VQ99
LinkDB
Position
Unknown
AA seq 341 aa
MAAAEAAVVSSSLIIDTAPVSEIAGTTAATAAAAVVAAAARTGAEPKVSKAAMATKLLSL
SGVFAVHKPKGPTSAELLNRLKEKLLAEAGMPSPEWTKRKKQTLKIGHGGTLDSAARGVL
VVGIGRGTKMLTSMLSGSKRYIAIGELGKATDTLDSTGKVTEEKPYDKITQEDIEGILQK
FTGNIMQVPPLYSALKKDGQRLSTLMKRGEVVEAKPARPVTVYSISLQKFQPPFFTLDVE
CGGGFYIRSLVSDIGKELSSCASVLELTRTKQGPFTLEEHALPEDKWTIDDIAQSLQHCS
SLLPADLALKKSKPEESNEQVLSCEYITLNETKGDDVIKTF
NT seq 1026 nt   +upstreamnt  +downstreamnt
atggcagctgctgaggcggcggtggtgtcgtcgtctttgataatagacacagccccagtt
tctgaaattgcaggaacaactgcagcaacggctgcagccgcggtggttgcggcggcggcc
aggaccggagccgaacccaaggtctccaaggccgctatggctactaagctgctgtccctt
agcggcgtgttcgcggtgcacaagcccaaagggcccacttcagccgagctgctgaatcgg
ttgaaggaaaagctgctggcagaagctgggatgccttctccagaatggaccaagaggaaa
aagcagactttgaaaattgggcatggagggactctagacagcgcagcccgaggtgttttg
gtggttggaattggaaggggaacaaaaatgttgaccagtatgttgtcagggtccaagagg
tacattgccattggagaactggggaaagctactgacacactagattctacagggaaagta
acagaagagaaaccctatgataaaataacacaagaagatattgaaggcattctacagaaa
tttactgggaatataatgcaagtacctcctctttattcggcattaaagaaagatggacag
agactttcaacgttaatgaagagaggtgaagtagtagaagccaaacctgccaggccagtt
actgtctacagtatctcgctacaaaaattccaaccaccgtttttcacgttagatgttgaa
tgtggaggtggtttttatatcagaagcttggttagtgacattggcaaagaactctcttcc
tgtgccagtgtactagagctgacccgaaccaaacaggggccatttacactagaagagcat
gccctccctgaagacaagtggacgattgatgatattgctcaatcccttcagcattgttca
tctcttctcccagcagacttggcacttaaaaaatcaaaacctgaggaatctaacgagcag
gttttgagctgtgaatatataactctaaatgagacaaaaggagatgatgtaattaagaca
ttttga

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