Castor canadensis (American beaver): 109695653
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Entry
109695653 CDS
T04791
Name
(RefSeq) collagen alpha-1(XVIII) chain-like
KO
K06823
collagen type XVIII alpha
Organism
ccan
Castor canadensis (American beaver)
Pathway
ccan04974
Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:
ccan00001
]
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
109695653
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ccan04147
]
109695653
00535 Proteoglycans [BR:
ccan00535
]
109695653
00536 Glycosaminoglycan binding proteins [BR:
ccan00536
]
109695653
Exosome [BR:
ccan04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
109695653
Proteoglycans [BR:
ccan00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
109695653
Glycosaminoglycan binding proteins [BR:
ccan00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
109695653
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Endostatin
Collagen
Collagen_trimer
DUF1554
Motif
Other DBs
NCBI-GeneID:
109695653
NCBI-ProteinID:
XP_020033885
UniProt:
A0A8B7VU81
LinkDB
All DBs
Position
Unknown
AA seq
625 aa
AA seq
DB search
FPPAWGQRAIARVAGPEGRPGSAGFPGPAGPKGDLGSKGEQGFPGPKGEKGEPGSIFSPD
GRALGPTQKGAKGEPGFRGPPGPYGRPGHKGEIGFPGRPGRPGMNGLKGEKGEPGDASLS
FGMRGMPGPPGPPGPPGPPGTPVFDNNAFVESGRPGPQGLQGVQGPSGPKGDKGEVGPPG
PPGQFPFDLLHLGAEMKGEKGDRGNTGQKGDRGEPGPSTGFFGSSVPGPPGPPGYPGIPG
PKGESIRGQPGPPGPQGPPGIGYEGRQGPPGPPGPPGPPSFPGPHRQTVSIPGPPGPPGP
PGPPGAMGTSSGQVRIWATYQTMLDKVREVPEGWLTFVVEREELYVRVRNGFRKVLLEAR
TPLPRGTDNEVTVLQPPVVQLHESSPYTRRGHYHSTERPWRADDILAGPPRLPNPQPYPG
APHHHGSYVHLRPAHPTGSPAHTHQDFQPVLHLVALNSPLPGGMRGIRGADLQCFQQARA
VGLAGTFRAFLSSRLQDLYSIVRRADRGAVPIVNLKDEVLFPSWEALFSGSQGQLQPGSR
IFSFDGKDVLRHPTWPQKSVWHGSDPSGRRLTESYCETWRTEAASATGQASSLLTGRLLE
QKAASCHNSYIVLCIENSFMTSSSK
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
tttccgcctgcctggggacagcgagcaatcgcacgtgtggctggacctgagggcaggccg
ggatccgcgggctttcccggtcctgccggaccaaagggtgacctgggttccaaaggcgag
caaggcttcccagggcccaagggtgagaagggggaacctggcagcatcttcagccctgat
ggcagagctctgggccccacccagaaaggagcgaagggagagccaggtttccgaggaccc
ccgggtccgtatggacggcctgggcacaagggagagattggctttcctggacggccgggt
cgccccgggatgaacggattgaagggagagaagggagaaccaggagatgccagcctcagt
ttcggcatgaggggcatgcccggccctccagggcctccagggcccccaggccctcctggg
acacccgtctttgacaacaacgcatttgtggagtctggccgcccagggcctcaaggattg
caaggggtgcaggggccatctggaccaaagggcgataaaggagaagtgggcccaccagga
ccaccagggcagtttccctttgacctccttcacttgggagctgaaatgaagggagagaag
ggagaccgagggaacaccggacagaaaggcgacaggggtgagcccggacccagcactggc
ttcttcggttcaagcgtgcctgggccccctggcccaccaggataccctgggattccgggt
ccaaagggagagagcatccgaggccagcctggacctcctggacctcaaggacctcctggc
attggctatgaggggcgccagggcccccctgggcctccaggcccaccagggcccccctcg
ttccccggacctcacaggcagactgtcagcattcctggccccccaggcccgcctggaccc
ccaggaccccctggagccatgggcacctcctcagggcaggtgaggatctgggccacatat
cagaccatgctggacaaggtgcgtgaggtgcccgagggctggctcacctttgtggtggag
agagaagagctctacgtccgagtccgaaatgggttccggaaggtcctgctggaggcccgg
acaccgctcccacgtggaacggacaatgaagtgaccgtcctgcagcccccagtggtgcag
ctgcacgagagcagcccttacacccggcggggacactaccactccacagagcggccctgg
agggcagacgacatcctggctggccctccacgcctgccaaacccccagccctaccccggg
gctccacaccaccatggttcctatgtgcatctccggccggcccaccccacgggctctcct
gcccacacccaccaggacttccagccagtgctccacctagtcgcactcaacagcccgttg
ccgggcggcatgcgtggtatccgaggagctgacctccagtgcttccagcaggcgcgggcc
gtggggctggccggcaccttccgcgccttcctgtcctcacggctgcaggacctctacagt
atcgtgcgccgcgctgaccgcggggctgtgcccatcgtcaatctcaaggacgaggtgctg
tttccgagctgggaggccctgttctcaggctcccagggccagctgcagcccggttcccgc
atcttctctttcgatggcaaggacgtcttgaggcaccccacctggccccagaagagtgtg
tggcatggctcagaccccagtggacgcaggctgaccgagagctactgtgagacatggcgg
acggaggctgcctcagccacaggccaggcctcctcattgctgacaggcaggctgctggag
cagaaagccgcaagctgccacaactcctacatcgtcctctgtattgagaacagcttcatg
acctcctcctccaagtag
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integrated database retrieval system
