Castor canadensis (American beaver): 109695746
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Entry
109695746 CDS
T04791
Symbol
Scn11a
Name
(RefSeq) sodium channel protein type 11 subunit alpha
KO
K04843
voltage-gated sodium channel type XI alpha
Organism
ccan
Castor canadensis (American beaver)
Brite
KEGG Orthology (KO) [BR:
ccan00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ccan04040
]
109695746 (Scn11a)
Ion channels [BR:
ccan04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
109695746 (Scn11a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
IQ_SCN5A_C
PKD_channel
GPHH
Motif
Other DBs
NCBI-GeneID:
109695746
NCBI-ProteinID:
XP_020034055
UniProt:
A0A8B7VUT8
LinkDB
All DBs
Position
Unknown
AA seq
1777 aa
AA seq
DB search
MDDRCYPVIFPDERNFRPFTPDSLAAIEKRIAIQKEKKKSKDKTVSEPQPRPQLDLKSSR
KLPKLYGNIPRELIAKPLEDLDPFYRNHKTFMVLNKKRTIYRFSAKHALFIFGPFNPIRS
LAIRLSVHSLFSVFIISTVVVNCVFMIRAKDSKSLEPDIAEYIFTGIYILEAMVKILARG
FILDEFSFLRDPWNWLDSIVIGTAVAAYFPFAKINLLSLRTFRVFRALKAISVVSGLKVI
VGALLRSVKKLVDVMILTLFCLSIFALVGQQLFMGNLNQKCIKKTCTFNSKINESCFEKE
NNSKEPIMCGTWFGSRPCPNNSTCDHTKMNPDYGYTNFDNFGWSFLAMFRLMTQDSWEKL
YRQTLRTSGLYSVFFFVVVIFLGSFYLMNLTLAVVTMAYEEQNRNVAAETEAKEKMFQEA
QQLLKEEKEALVAMGIDRSSLNSLQASSFSPKKRKFFGNKKRRSFFLGESGKDQSPGSDS
DDDCSKKSQLLQQTKRLSQTLPVDLFDEHIDPFQRQRALSAVSILTITMQEKEKSQEPCL
PCGENLASKYLVWDCSPQWLCIKKALRTMMTDPFTELAITICIITNTVFLAMEHHHMNED
LQTILKTGNWVFTGIFIAEMCLKIIALDPYHYFRHGWNIFDSIVALLSFADVMNSVSDQS
WSFLRSFRVLRVFKLAKSWPTLNTLIKIIGHSVGALGNLTVVLAIVIFIFSVVGMQLFGT
KFCSVKSANFCIAEESCERRWHMGDFYHSFLVVFRILCGEWIENMWECMKEAESSLCVIV
FVLIMVIGKLVVLNLFIALLLNSFSQEEKNGNSEGEARKTKVQLAMQRFHWAFSFLIHTL
EHFCCKQCRRQNLPKQNEVTGNSTTDSKDIIPLVTELKRGSEPWEELDVVTPSAWRTSGI
GHNQTQLAPLAEEEDDTEYPDEDNTLPITRPDADKQVNDLHQETKKPTSPRDQGVEIGVL
SDEDAYLTIRNPRKKSDAASVLSECSTIDLQDSDGHLQQMVLPKKQPERCLPKGLSCCFP
CCSKDKRKSTWVIWWNLRKTCYQIVKHSWFESFIIFVILLSSGALVFEDVKLVERRQIQV
LLNCTDNIFTFIFILEMGLKWVAFGFGKYFTSAWCWLDFIIVIVSVVSLVDLKNWKSFRT
LRALRPLRALSQFEGMKVVVNALIGAIPAILNVLLVCLIFWLIFCILGVNFFSGKFGRCI
SGTDMNEYINYTKIPNRNQCEIGNYSWVTPNVNFDNVGMAYLALLQVATYKGWLDIMNAA
VDSRGKEEQPAFEANQYAYIYFVVFIIFGSFFTLNLFIGVIIDNFNQQQKKISGQDIFMT
EEQKKYYNAMKKLGTKKPQKPIPRPLNKCQGFVFDLVMNQVFDVIIMSLILLNMIIMMAE
SDHQPKNVNSILDNLNIAFVVIFTVECLIKIFALRQYYFTNGWNLFDCVVVVLSIISTMV
SALEHSEIPFPPTLFRIVRLARIGRILRLVRAARGIRTLLFALMMSLPSLFNIGLLLFLV
MFIYAIFGMNWFSKVEKKFGIDDIFNFETFAGSMLCLFQITTSAGWDSLLSPMLESKDSH
SSSDNRHLSTIAIAYFVSYIIISFLIVVNMYIAVILENFNTATEESEEPLGEDDFEIFYE
IWEKFDPEATQFIEYSALSDFADALPEPLRVAKPNKFQFLLMDLPMVSGDRLHCMDILFA
FTTRVLGDSDGLDTMKAMMEEKFMEANPFKRLYEPIVTTTKRKEEERGAAVIQKAFRKYM
MKTSTYALEDKAPSPLQTLCNGDLSSHEGAKGKVHCD
NT seq
5334 nt
NT seq
+upstream
nt +downstream
nt
atggacgacaggtgctacccagtgatcttcccagatgagagaaatttccgccccttcact
cctgactctctggctgcaatagagaaacggatcgccatccaaaaggagaaaaagaagtcc
aaagataagacagtatctgaaccccagcctcgacctcagcttgacctaaagtcttccagg
aagttgcccaagctctatggcaacattccccgtgagctgatagcaaagcccctagaagac
ttggacccattctacagaaatcacaagacatttatggtgctgaacaagaagaggacaata
taccgcttcagtgccaagcatgccttgttcattttcgggcctttcaatccaatcagaagt
ttggccattagactctctgtccattcgttgttcagtgtgttcatcatctccactgttgtc
gtcaactgtgtgttcatgattcgtgccaaggacagcaaaagtctagagcctgacattgca
gaatatatcttcactgggatttatattttggaagctatggtaaaaatattggcaagaggt
tttatcctggatgagttttctttccttcgagatccctggaactggctggactccattgtc
attggaacagcggttgcagcttattttccatttgccaaaatcaatctgctgtctctgcgt
accttccgagtgttcagagctttgaaagcaatttcggtagtttcaggcctgaaggtcatt
gtgggtgccttactgcgctctgtgaagaagttggtcgatgtgatgatcctcaccctcttt
tgcctcagcatctttgccctggtaggtcagcagctcttcatgggaaatctgaaccagaaa
tgtatcaagaagacctgtacctttaactctaaaattaacgaatcttgttttgaaaaagaa
aacaattccaaagaacccataatgtgtgggacctggtttggcagcaggccctgtcccaat
aattctacatgtgaccacaccaaaatgaatcctgactatggttatacgaattttgacaac
tttggctggtcttttcttgccatgttccgacttatgacccaagattcctgggaaaaactt
tatcgacagaccctgcgtacctctgggctctactctgtcttcttctttgtggtggtcatc
ttccttggatctttctacttgatgaacttgaccttggctgttgtcaccatggcttacgag
gagcagaacaggaatgtagcagcagagacagaggccaaggaaaagatgtttcaggaagcc
caacagctgttaaaggaggagaaagaggccctggttgctatgggaattgacagaagttca
cttaattcccttcaagcatcatctttttccccaaagaagagaaaattctttggtaataag
aaaaggaggtccttctttttgggagagtctggaaaagaccaatctccaggatcagattct
gatgatgattgctcaaaaaagtcacaacttctgcagcaaactaagcgactgtcccagact
ttgccagtggacctctttgatgagcacatagaccctttccaaaggcagagggcgctgagt
gccgttagcatcctcaccatcaccatgcaggaaaaggaaaaatcacaggagccttgtctc
ccgtgtggggaaaacctggcatcaaaataccttgtgtgggactgtagcccccagtggcta
tgcattaagaaggccctgagaaccatgatgaccgacccctttactgaactggccatcacc
atttgcatcataaccaatactgtcttcttggccatggagcatcaccatatgaacgaggat
cttcagaccatattgaaaacagggaattgggtgtttactggcatttttatagcagaaatg
tgcctaaaaatcattgcacttgatccctaccactattttcgtcatggctggaacattttt
gacagcattgttgctcttctgagctttgcagatgtgatgaacagtgtatctgatcaaagt
tggtcattcttacgttcctttagagtgctgagggtcttcaagttagccaaatcctggcca
actttaaacacactaattaagataattggccactctgtcggcgctctcggaaacctgact
gtggtcctggccatcgtgatctttattttctcagtcgtgggcatgcagctttttggcact
aaattctgttccgtaaagagtgcaaacttctgcattgctgaagagtcctgtgaacggcgc
tggcacatgggagatttctaccactccttcctggtggtgttccgcatcctctgtggggaa
tggatagaaaacatgtgggagtgtatgaaggaggcggaatcatctttgtgtgtcattgtc
tttgtgttgatcatggtgataggcaaacttgtggtgctgaacctcttcattgccttactg
ctcaattccttcagccaggaggagaaaaatggaaactcagaaggagaagccaggaaaact
aaagttcagttagccatgcaacggttccactgggctttttcttttctgatacacactctt
gagcatttctgttgcaagcagtgcaggaggcaaaacttaccaaagcaaaatgaggtaaca
ggaaactctactacagacagcaaagacattatccctttggtcacagagttgaaaagggga
tcagagccctgggaggaacttgatgtggtgactccttctgcatggaggacttcaggcatt
gggcacaatcagactcagttggctccacttgcagaggaagaggatgacactgaatatcct
gatgaagacaacaccctgcccatcacacgacctgatgctgacaaacaggtcaatgacctc
catcaggagaccaagaagcccacaagcccaagagatcagggtgtggaaattggtgtgctt
tctgatgaagatgcttatttgactatacgaaatcctcgaaagaaatctgatgctgccagt
gtgctatcagaatgcagcactatcgatctacaggattctgatggacatttacagcaaatg
gttctcccaaaaaagcaaccagagagatgtttacccaaaggcctcagttgctgcttccca
tgctgtagcaaagacaagagaaagtccacctgggtcatttggtggaatctgcggaaaacc
tgctaccaaatagtgaagcacagctggtttgagagctttattatctttgtgattctgctg
agcagtggggcactggtatttgaagatgttaagcttgttgaacgacgccaaatccaagtg
ttactaaattgtactgacaatattttcacattcatttttatcctggagatgggtctgaaa
tgggtggcctttggatttgggaagtatttcaccagtgcctggtgttggctcgatttcatc
attgtgattgtgtctgtagtcagtctcgttgatttaaagaactggaagtccttccggacc
ctgcgagcactgaggcctctgcgagcactgtctcaatttgaaggaatgaaggtggtggtc
aatgctctcataggtgccatacctgccattctgaatgttttgctagtatgcctcattttc
tggctcatattttgtatcctgggagtaaacttcttttctgggaagtttggaagatgcatt
agtggaacagatatgaatgaatatataaattataccaagattccaaaccgaaaccaatgt
gagattggcaattactcctgggtgaccccaaatgtcaactttgacaatgtggggatggct
tacctcgctctgctgcaagtggcaacatataagggttggctggacattatgaatgcagca
gttgattccagagggaaagaagaacagccagcgtttgaggcgaatcaatacgcatacatt
tacttcgtagtttttatcatctttggctcgttcttcactctgaatctctttattggtgtt
attattgacaacttcaaccaacagcagaaaaagataagtggccaagacatttttatgaca
gaagaacagaagaaatactacaatgcaatgaaaaaattaggaaccaaaaaacctcaaaaa
ccaatcccaaggcctctgaacaaatgtcaaggttttgtgtttgatctggtcatgaaccag
gtttttgacgtcatcatcatgagtcttattctcttaaacatgattatcatgatggctgaa
tcagatcaccaacccaaaaacgtgaactcgatcctcgataatctcaacatagcctttgtg
gtcatctttacagtagagtgtctcatcaaaatctttgctttgaggcaatactacttcacc
aatggctggaatttatttgattgtgtggttgtggttctttctattattagcacaatggtt
tctgccttggaacacagtgaaattcctttcccgccaacactcttcagaattgtccgcttg
gctcggattggccgaatcttgaggcttgttcgggcagcacgaggaattaggactctcctt
tttgctctgatgatgtcccttccttctctattcaacatcggccttctactctttctggtt
atgtttatttatgccatttttggtatgaactggttttccaaagtggagaaaaagtttggg
attgatgatatattcaacttcgaaacttttgctggcagtatgctctgtctcttccagata
accacatctgcaggctgggattccctcctcagccccatgctagaatcaaaggactcacac
agctcctcggacaaccgtcacctgtctaccatcgccatagcctacttcgtcagttacatc
atcatctcctttctcattgttgtcaacatgtacattgctgtcattttagagaacttcaat
acagccactgaagaaagtgaggaacccttgggtgaagatgactttgaaatattctatgag
atctgggaaaagtttgaccctgaagcaacacagtttattgaatattctgccctttctgac
tttgctgatgccttgcctgagcctttgcgtgtggccaaaccaaataaattccagtttcta
ttaatggacttgcccatggtgagtggagatcgcctccactgcatggatattctcttcgcc
ttcaccactagggtcctgggtgactctgatggcctggataccatgaaggccatgatggag
gagaagttcatggaagccaaccctttcaagaggctctacgaacccatcgtcaccaccacc
aagagaaaggaagaagaaagaggtgctgctgttatccaaaaggcctttcgaaagtacatg
atgaagacgtccacgtatgctctggaggacaaagctccgtcaccactccagacactttgc
aatggagacttgtctagccatgagggggccaagggcaaggttcactgtgactga
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integrated database retrieval system
