Castor canadensis (American beaver): 109695938
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Entry
109695938 CDS
T04791
Symbol
Gtf2h1
Name
(RefSeq) general transcription factor IIH subunit 1
KO
K03141
transcription initiation factor TFIIH subunit 1
Organism
ccan
Castor canadensis (American beaver)
Pathway
ccan03022
Basal transcription factors
ccan03420
Nucleotide excision repair
ccan05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
ccan00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
109695938 (Gtf2h1)
09124 Replication and repair
03420 Nucleotide excision repair
109695938 (Gtf2h1)
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
109695938 (Gtf2h1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccan03021
]
109695938 (Gtf2h1)
03400 DNA repair and recombination proteins [BR:
ccan03400
]
109695938 (Gtf2h1)
Transcription machinery [BR:
ccan03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
109695938 (Gtf2h1)
DNA repair and recombination proteins [BR:
ccan03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
109695938 (Gtf2h1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PH_TFIIH
BSD
GeBP-like_C
Motif
Other DBs
NCBI-GeneID:
109695938
NCBI-ProteinID:
XP_020034326
UniProt:
A0A250YJQ5
LinkDB
All DBs
Position
Unknown
AA seq
548 aa
AA seq
DB search
MATSSEEVLLIVKKVRQKKQDGALYLMAERIAWAPEGKDRFTISHMYADIKCQKISPEGK
AKIQLQLVLHAGDTTNFHFSNESTAVKERDAVKDLLQQLLPKFKRKANKELEEKNRMLQE
DPVLFQLYKDLVVSQVISAEEFWASRLNVNATDSSSTSNHKQDVGISAAFLADVRPQTDG
CNGLRYNLTSDIIESIFRTYPAVKMKYAENVPHNMTEKEFWTRFFQSHYFHRDRLNTGSK
DLFAECAKIDEKGLKTMVSLGVKNPLLDLTALEDKPLDEGYGISSVPSTSSSKSIKENSN
AAIIKRFNHHSAMVLAAGLRKQQAQNEQNGEPSSMDGNCGDADCFQPAVKRAKLQESIEY
EDLGKNNSIKTIALNLKKSDRYYHGPTPIQSLQYATSQDIINSFQSIRQEMEAYTPKLTQ
VLSSSAASSTITALSPGGALMQGGTQQAINQMVPNDIQSELKHLYVAVGELLRHFWSCFP
VNTPFLEEKVVKMKSNLERFQVTKLCPFQEKIRRQYLSTNLVSHIEEMLQTAYNKLHSWQ
SRRLMKKT
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atggcaacttcatcagaagaagttttgctgattgtaaagaaggtgcgtcagaagaagcag
gatggagctctatacctcatggcagaaagaattgcttgggcacctgaaggcaaagataga
tttaccatcagccatatgtatgcagatattaaatgccagaaaatcagtccagaaggaaaa
gctaaaattcagcttcagctggtcctgcatgcaggagacacaactaacttccatttttct
aatgaaagcacagcagtaaaagagcgagatgcagtaaaagaccttcttcagcagctactg
cccaaattcaagaggaaagcaaataaagaactggaagagaaaaacagaatgctccaagaa
gatcctgttttgtttcagctttacaaagaccttgttgtaagtcaagtgatcagtgctgag
gaattctgggccagtcgtttaaatgtgaatgcaacagatagctcttccacatccaatcac
aagcaggatgttggcatttctgcagcatttctggctgatgtccggccccagacagatgga
tgtaatggtttgagatataatttaacttctgatatcattgagtccatatttaggacctat
ccagcagtaaaaatgaaatatgcagaaaatgttccccacaacatgacagaaaaagaattc
tggacacgttttttccagtcccattattttcatagggaccggctgaatacagggtcaaag
gatctctttgcagaatgtgccaaaatagatgaaaaagggttaaaaacaatggtttcatta
ggagtgaaaaacccactactagatttgacagctttggaagataaaccattagatgagggc
tatggcatttcctctgtgccatctacttccagttctaaatccataaaggagaatagtaat
gctgccatcatcaagagatttaaccatcacagtgctatggtcctagcagctggtctcagg
aaacaacaagcacaaaatgaacaaaatggtgagcccagcagcatggatggaaattgtgga
gatgcagattgctttcaaccagcagtcaaaagggcgaagttacaagagtccattgaatat
gaagatttgggaaaaaataattccataaaaacaattgcactaaacctcaagaagtcagat
aggtattaccatggtccaactccaatccagtcactacaatatgcaacaagtcaggacatt
attaattcctttcaaagtattagacaagaaatggaagcttatacacccaagttaactcag
gttctctcaagtagtgctgctagtagtaccatcacagcactgtcacctggaggagcactt
atgcagggagggacacagcaagccataaaccagatggtgccaaatgatatccagtctgaa
ttgaaacacttgtatgtggctgttggagaacttctgcggcatttctggtcctgctttcct
gtcaatacaccattcctagaagaaaaggtagtgaaaatgaaaagtaatttggaacggttc
caagttacaaagctctgtccattccaagaaaaaatccggagacagtatttaagcacaaat
ttggtaagtcacatagaagagatgctccagacagcctacaacaagctccactcatggcag
tcacggcgcctgatgaagaagacgtga
DBGET
integrated database retrieval system
