Castor canadensis (American beaver): 109695961
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Entry
109695961 CDS
T04791
Symbol
Atg16l1
Name
(RefSeq) autophagy-related protein 16-1 isoform X1
KO
K17890
autophagy-related protein 16-1
Organism
ccan
Castor canadensis (American beaver)
Pathway
ccan04136
Autophagy - other
ccan04140
Autophagy - animal
ccan04145
Phagocytosis
ccan04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
ccan00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
109695961 (Atg16l1)
04140 Autophagy - animal
109695961 (Atg16l1)
04136 Autophagy - other
109695961 (Atg16l1)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
109695961 (Atg16l1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccan04131
]
109695961 (Atg16l1)
03029 Mitochondrial biogenesis [BR:
ccan03029
]
109695961 (Atg16l1)
Membrane trafficking [BR:
ccan04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
109695961 (Atg16l1)
Others
Specific organelles associated proteins
Auto phagosome
109695961 (Atg16l1)
Mitochondrial biogenesis [BR:
ccan03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
109695961 (Atg16l1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
ATG16
Beta-prop_WDR3_1st
WD40
Beta-prop_THOC3
Beta-prop_IFT122_1st
WD40_WDHD1_1st
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_Gbeta
Beta-prop_WDR3_2nd
WDR55
EIF3I
Beta-prop_WDR36-Utp21_2nd
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR75_1st
Beta-prop_CAF1B_HIR1
Beta-prop_EML
WD40_MABP1-WDR62_2nd
DSE1_N
Beta-prop_TEP1_C
Beta-prop_Aladin
Beta-prop_SCAP
Beta-prop_DCAF4
Beta-prop_WDR90_POC16_2nd
Beta-prop_EIPR1
WD40_MABP1-WDR62_1st
Beta-prop_RIG_2nd
Beta-prop_VPS8
WDR90_beta-prop_4th
WD40_RFWD3
Beta-prop_IFT140_1st
Beta-prop_ACSF4
Beta-prop_DCAF12
Ge1_WD40
CFAP251_N
Beta-prop_NWD2_C
KASH_CCD
Tricorn_2nd
ASA1
Imm51
Motif
Other DBs
NCBI-GeneID:
109695961
NCBI-ProteinID:
XP_020034366
LinkDB
All DBs
Position
Unknown
AA seq
637 aa
AA seq
DB search
MSSGLRAADFPRWKRHIAEELRRRDRLQRQAFEEIILQYNKLLEKSDLHSVLAQKLQAEK
HDTPNRHEISPGHDGTWNDSQLQEMAQLRIKHQEELTELHKKRGELAQLVIDLNNQMQQK
DREMQMNEAKIAECLQTISDLETECLDLRSKLQDLEIANQTLKDEYDALQITFTALEEKL
RKTTEENQELVTRWMAEKAQEANRLNAENEKDSRRRQARLQKELAEAAKEPLPVEQDDDI
EVIVDEASDHTEDTSPVRAISRAATKRLSQPAGGLLDSITNIFGLSESPLLGHHSSSDAA
RRRSVSSFPVPQDNMDTHPVSGKDVRVPTTALCVFDAHDGEVNAVQFSPGSRLLATGGMD
RRVKLWEAFGDKCEFKGSLSGSNAGITSIEFDSAGAYLLAASNDFASRIWTVDDHRLRHT
LTGHSGKVLSAKFLLDNARIVSGSHDRTLKLWDLRSKVCIKTVFAGSSCNDIVCTEQCVM
SGHFDKKIRFWDIRSESVVREMELLGKITALDLNPERTELLSCSRDDLLKVIDLRTNTVK
QTFSAPGFKCGSDWTRVVFRLVATPTPSLANLSPDGSYVAAGSAEGSLYVWSVLTGKVEK
VLSKQHSSSINAVAWAPSGLHVISVDKGSKAVLWAQP
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcgggtctccgcgctgccgatttcccccgctggaagcgccacattgcagaggag
ctgaggcgccgggaccgcctgcagaggcaggcgttcgaggagatcatcctgcagtataac
aagttgctggaaaagtcagatcttcattcagtgttggcccagaaactacaagctgaaaag
cacgacacaccaaacaggcacgagataagtcctggacacgatggtacatggaatgatagt
cagctacaagaaatggcccagttgaggattaagcaccaggaagaactgactgaattacac
aagaaacgtggggagttagctcagttggtgattgacctgaacaaccaaatgcagcagaag
gacagagagatgcagatgaatgaagcaaaaattgcagagtgtttgcagaccatctctgac
ctggagacagagtgcctagacctgcgcagcaagcttcaggaccttgagatagccaaccag
accctgaaggatgaatatgacgccctgcagatcacttttactgccttggaggaaaaactg
aggaaaactaccgaggagaaccaggagctggtcaccaggtggatggctgagaaggcccag
gaagccaatcgcctcaatgcagagaacgagaaggactccaggagacgtcaagcccggctg
cagaaagagcttgcagaagcagcaaaggaaccactgccagttgaacaggatgatgatatt
gaagtcattgtggatgaagcctcagatcacacagaggacacctcccccgtgagggccatc
agcagagcagctactaagcgactctcgcagcctgctggaggccttctggattctatcact
aatatctttggtctgtccgagtctccccttttgggacatcattcttcttctgatgctgcc
aggagacgctctgtctcttcctttccagtcccccaggacaatatggatacccatcctgtt
tctggtaaagatgtgagggtgccaactactgccttgtgtgtctttgatgcacacgatggg
gaagtcaatgctgtgcagtttagtccaggttctcggttactagccacaggaggcatggac
cgacgggttaagctgtgggaagcatttggagataaatgtgagttcaagggttccctatct
ggcagtaatgctggaattacaagcattgaatttgatagcgctggagcttacctcttagca
gcttctaatgattttgcaagccggatctggactgtggatgatcatcggttacggcacaca
ctcacaggacacagtgggaaagtgctgtctgctaaattcctgctggacaatgcacggatc
gtctcgggaagtcacgaccggaccctcaaactctgggatctacgcagcaaagtctgcata
aagacagtgtttgcaggatccagttgcaatgatattgtctgcacagagcaatgtgtaatg
agtggacattttgacaagaaaattcgtttctgggacatccgatcagagagtgtggtccga
gagatggagctgttggggaagatcactgccctggacttaaacccagaaaggacggagctc
ctgagctgctcccgggatgacctgctgaaagtcattgatctccgcacaaatactgtcaaa
cagaccttcagtgcccctggattcaagtgtggctctgactggacccgagttgtcttcagg
ttggtagccacacctacccccagcttggctaatctcagccccgacggcagctacgtggca
gcaggctcagctgagggctctctctatgtctggagtgtgctcacagggaaggtggagaag
gttctttccaaacagcacagctcctccatcaatgcggtggcgtgggccccctccggcttg
catgtcatcagtgtggacaaaggaagcaaagctgtgctatgggctcaaccttga
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integrated database retrieval system
