Castor canadensis (American beaver): 109695961
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Entry
109695961 CDS
T04791
Symbol
Atg16l1
Name
(RefSeq) autophagy-related protein 16-1 isoform X1
KO
K17890
autophagy-related protein 16-1
Organism
ccan
Castor canadensis (American beaver)
Pathway
ccan04136
Autophagy - other
ccan04140
Autophagy - animal
ccan04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
ccan00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
109695961 (Atg16l1)
04136 Autophagy - other
109695961 (Atg16l1)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
109695961 (Atg16l1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccan04131
]
109695961 (Atg16l1)
03029 Mitochondrial biogenesis [BR:
ccan03029
]
109695961 (Atg16l1)
Membrane trafficking [BR:
ccan04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
109695961 (Atg16l1)
Others
Rab GTPases of specific organelles
Auto phagosome
109695961 (Atg16l1)
Mitochondrial biogenesis [BR:
ccan03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
109695961 (Atg16l1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATG16
WD40
Ge1_WD40
KASH_CCD
APEH_N
Motif
Other DBs
NCBI-GeneID:
109695961
NCBI-ProteinID:
XP_020034366
UniProt:
A0A8B7VQX9
LinkDB
All DBs
Position
Unknown
AA seq
637 aa
AA seq
DB search
MSSGLRAADFPRWKRHIAEELRRRDRLQRQAFEEIILQYNKLLEKSDLHSVLAQKLQAEK
HDTPNRHEISPGHDGTWNDSQLQEMAQLRIKHQEELTELHKKRGELAQLVIDLNNQMQQK
DREMQMNEAKIAECLQTISDLETECLDLRSKLQDLEIANQTLKDEYDALQITFTALEEKL
RKTTEENQELVTRWMAEKAQEANRLNAENEKDSRRRQARLQKELAEAAKEPLPVEQDDDI
EVIVDEASDHTEDTSPVRAISRAATKRLSQPAGGLLDSITNIFGLSESPLLGHHSSSDAA
RRRSVSSFPVPQDNMDTHPVSGKDVRVPTTALCVFDAHDGEVNAVQFSPGSRLLATGGMD
RRVKLWEAFGDKCEFKGSLSGSNAGITSIEFDSAGAYLLAASNDFASRIWTVDDHRLRHT
LTGHSGKVLSAKFLLDNARIVSGSHDRTLKLWDLRSKVCIKTVFAGSSCNDIVCTEQCVM
SGHFDKKIRFWDIRSESVVREMELLGKITALDLNPERTELLSCSRDDLLKVIDLRTNTVK
QTFSAPGFKCGSDWTRVVFRLVATPTPSLANLSPDGSYVAAGSAEGSLYVWSVLTGKVEK
VLSKQHSSSINAVAWAPSGLHVISVDKGSKAVLWAQP
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcgggtctccgcgctgccgatttcccccgctggaagcgccacattgcagaggag
ctgaggcgccgggaccgcctgcagaggcaggcgttcgaggagatcatcctgcagtataac
aagttgctggaaaagtcagatcttcattcagtgttggcccagaaactacaagctgaaaag
cacgacacaccaaacaggcacgagataagtcctggacacgatggtacatggaatgatagt
cagctacaagaaatggcccagttgaggattaagcaccaggaagaactgactgaattacac
aagaaacgtggggagttagctcagttggtgattgacctgaacaaccaaatgcagcagaag
gacagagagatgcagatgaatgaagcaaaaattgcagagtgtttgcagaccatctctgac
ctggagacagagtgcctagacctgcgcagcaagcttcaggaccttgagatagccaaccag
accctgaaggatgaatatgacgccctgcagatcacttttactgccttggaggaaaaactg
aggaaaactaccgaggagaaccaggagctggtcaccaggtggatggctgagaaggcccag
gaagccaatcgcctcaatgcagagaacgagaaggactccaggagacgtcaagcccggctg
cagaaagagcttgcagaagcagcaaaggaaccactgccagttgaacaggatgatgatatt
gaagtcattgtggatgaagcctcagatcacacagaggacacctcccccgtgagggccatc
agcagagcagctactaagcgactctcgcagcctgctggaggccttctggattctatcact
aatatctttggtctgtccgagtctccccttttgggacatcattcttcttctgatgctgcc
aggagacgctctgtctcttcctttccagtcccccaggacaatatggatacccatcctgtt
tctggtaaagatgtgagggtgccaactactgccttgtgtgtctttgatgcacacgatggg
gaagtcaatgctgtgcagtttagtccaggttctcggttactagccacaggaggcatggac
cgacgggttaagctgtgggaagcatttggagataaatgtgagttcaagggttccctatct
ggcagtaatgctggaattacaagcattgaatttgatagcgctggagcttacctcttagca
gcttctaatgattttgcaagccggatctggactgtggatgatcatcggttacggcacaca
ctcacaggacacagtgggaaagtgctgtctgctaaattcctgctggacaatgcacggatc
gtctcgggaagtcacgaccggaccctcaaactctgggatctacgcagcaaagtctgcata
aagacagtgtttgcaggatccagttgcaatgatattgtctgcacagagcaatgtgtaatg
agtggacattttgacaagaaaattcgtttctgggacatccgatcagagagtgtggtccga
gagatggagctgttggggaagatcactgccctggacttaaacccagaaaggacggagctc
ctgagctgctcccgggatgacctgctgaaagtcattgatctccgcacaaatactgtcaaa
cagaccttcagtgcccctggattcaagtgtggctctgactggacccgagttgtcttcagg
ttggtagccacacctacccccagcttggctaatctcagccccgacggcagctacgtggca
gcaggctcagctgagggctctctctatgtctggagtgtgctcacagggaaggtggagaag
gttctttccaaacagcacagctcctccatcaatgcggtggcgtgggccccctccggcttg
catgtcatcagtgtggacaaaggaagcaaagctgtgctatgggctcaaccttga
DBGET
integrated database retrieval system
