Castor canadensis (American beaver): 109696053
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Entry
109696053 CDS
T04791
Symbol
Ddx52
Name
(RefSeq) probable ATP-dependent RNA helicase DDX52 isoform X1
KO
K14779
ATP-dependent RNA helicase DDX52/ROK1 [EC:
5.6.2.7
]
Organism
ccan
Castor canadensis (American beaver)
Brite
KEGG Orthology (KO) [BR:
ccan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ccan03009
]
109696053 (Ddx52)
Enzymes [BR:
ccan01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
109696053 (Ddx52)
Ribosome biogenesis [BR:
ccan03009
]
Eukaryotic type
90S particles
Helicases
109696053 (Ddx52)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
P-loop_SecA
AAA_19
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
109696053
NCBI-ProteinID:
XP_020034503
UniProt:
A0A8B7VSC3
LinkDB
All DBs
Position
Unknown
AA seq
599 aa
AA seq
DB search
MDVHDLFRRLGAGAKFDVNRFSADAARFQVGKRKYDFDSSEVLRGLDFFGNKKSISCECG
ASQTDQKLQNEEKKEENLIERKRETNKKKRKKMVSENPFQDEATTIQWISSVEAKIEDKK
VKEENKLNSEKLEELRKEKLNFFRNKYKIHVQGTDLPDPIATFQQLDWEYKINSRLLQNI
LDSGFQMPTPIQMQAIPVMLHGRELLASAPTGSGKTLAFSIPILMQLKQPTNKGFRALII
SPTRELANQIHRELIKISEGTGFRIHMINKAAVASKKFGSKSSKKFDILVTTPNRLIYLL
KQDPPGIDLTSVEWLVVDESDKLFEDGKTGFRDQLASIFLACTSHKIRRAMFSATFAYDV
EQWCKLNLDNVITVSIGARNSAVETVEQELLFVGSETGKLLAVRELVKKGFSPPVLVFVQ
SIERAKELFHELIYEGINVDVIHAERTQQQRDNTVHSFRAGKIWVLICTALLARGIDFKG
VNLVINYDFPTSSVEYIHRIGRTGRAGHKGKAVTFFTEDDKPLLRSVANVIQQAGCPVPG
YIKGFQKLLSKQKKKMIKKPLERESISTTPKYFLEQAKAKQKKATRQSSKKKVTLEGKS
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atggacgtccacgatctttttcgccggcttggcgcgggggccaagttcgacgtgaatcgc
ttctccgcggatgcagctcgattccaggtaggaaaaaggaaatatgactttgattcttca
gaggtgctccggggactggacttctttggaaacaagaagtctatctcatgtgagtgtgga
gcatcacaaacagaccagaagctccaaaatgaagagaaaaaagaagagaacctaattgaa
aggaagagggagacaaacaagaaaaagagaaagaagatggtttcagaaaatccttttcaa
gatgaagctactactatacagtggatatcatctgtggaagcaaagattgaagataaaaaa
gttaaagaagaaaataaactaaattcagaaaagttggaagagctcagaaaggaaaagtta
aatttcttcaggaataaatacaaaattcacgttcaaggaactgatcttcctgacccaatt
gctacatttcagcaacttgactgggaatataaaattaattctcgactgcttcagaacatt
ctagactcgggcttccaaatgcctacaccaatccaaatgcaagccattccagttatgctg
catggtcgggaacttttggcttctgctcctacaggatctgggaaaactttagcttttagc
attcccattttaatgcagctgaaacaacccacaaataaaggtttcagagccttgattata
tctccaacacgagaacttgccaaccagattcaccgagagttaattaaaatctccgaggga
acaggattcaggatacacatgatcaacaaagcagcagtggcatccaagaaattcggatct
aagtcatctaagaagtttgatattcttgtgactactccaaatcgactgatctatttatta
aaacaagatccaccagggatagacctaacaagtgttgagtggctggtagtagacgaatca
gacaaactatttgaggatggcaaaactgggtttagagaccagctggcttccattttcctg
gcctgcacatcccacaagatcagaagagctatgttcagtgcaacttttgcatatgatgtt
gagcagtggtgcaaactcaacctagacaatgtcatcactgtatccattggagcaagaaat
tctgcagtagagactgtagaacaagagcttctttttgtcgggtctgagactggaaaactt
ctggccgtgagagaacttgttaaaaagggtttcagtccacctgttcttgtttttgttcag
tccattgaaagggctaaagaactttttcatgagcttatatatgaaggtattaatgtagat
gttattcatgcggaaagaacacagcaacagagagataacacagtccacagcttcagagca
ggaaaaatttgggttcttatttgtacagccttgcttgcaagaggcattgattttaaaggt
gtgaacttggtgattaattacgactttccaaccagctcagtggaatatatccacagaata
ggtcgaactggaagagcagggcataaaggaaaagctgttacattttttactgaagatgat
aaaccattattaagaagtgttgccaatgtcatacagcaggctggatgtcctgtacctgga
tacataaaaggtttccaaaaattgctaagcaaacaaaagaaaaaaatgattaagaaacca
ctggaaagggagagtattagtacaactccaaaatatttcttagagcaagctaaagctaag
cagaaaaaggccactcgccagagcagcaagaagaaggtaacccttgaaggcaaaagttaa
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