Castor canadensis (American beaver): 109696129
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Entry
109696129 CDS
T04791
Symbol
Polr1a
Name
(RefSeq) LOW QUALITY PROTEIN: DNA-directed RNA polymerase I subunit RPA1
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
ccan
Castor canadensis (American beaver)
Pathway
ccan03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ccan00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
109696129 (Polr1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccan03021
]
109696129 (Polr1a)
Enzymes [BR:
ccan01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
109696129 (Polr1a)
Transcription machinery [BR:
ccan03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
109696129 (Polr1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RNA_pol_Rpb1_1
Motif
Other DBs
NCBI-GeneID:
109696129
NCBI-ProteinID:
XP_020034609
UniProt:
A0A8B7VTK4
LinkDB
All DBs
Position
Unknown
AA seq
1713 aa
AA seq
DB search
MLASKNMPWRRLQGISFGMYSAEELKKLSVKCITNPRYVDNLGNPSANGLYDLALGPADS
KEVCSTCVQDFSNCSGHLGHIELPLTVYNPLLFDKLYLLLRGSCLNCHMLTCPRAVIHLL
VCQLRVLEVGALQAVYELERILNRFLEENADPSATEIQEELEEYTMKTLQNNLLGSQCAH
VKNVCESRSKLIAYFWKAHMTAKRCPHCKTGRSVVRKEHNSKLTITYPAMVHKKSGQKDT
EPQAPGIEEAQMGKRGYLTPNSAQEHLFAIWKNEGFFLNYLFSGLGNVDTESRFNPSMFF
LDFVVVPPSRYRPVNRLGDQVFTNGQTVNLQAVMKDVVLIRKLLALMAQEQKLPCEVAAL
TTDKDKDFSVAMDRSFLTMLPGQSLTDKLYNIWIRLQSHVNIVFDSEMDKLMLEKFPGIR
QILEKKEGLFRKHMMGKRVDYAARSVICPDMYINTNEIGIPMVFATKLTYPQPVTPWNVQ
ELRQXVINGPNVHPGASMVISEDGSRTALSAVDITQREAVAKQLLTPATGTPKPQGTKIV
CRHVKNGDILLLNRQPTLHRPSIQAHHARILPEEKVLRLHYANCKAYNADFDGDEMNAHF
PQSELGRAEAYVLACTSQQYLVPKDGQPLAGLIQDHMVAGVNMTIRSCFFTREQYMELVY
RGLTDKVGRVKLFPPAILKPFPLWTGKQVVSTLLINIIPEDYIPLNLSGKAKISGKAWVK
ETPKPVPGFNPDSMCESQVIIREGELLCGVLDKAHYGSSAYGLVHCCYEIYGGETSGKVL
TCLARLFTAYLQLYRGFTLGVEDILVKPKADVKRQQIIEESIHCGPRAVRVALNLPEAAS
CNEVRDKWQDAHLGKDQRDYNMIELKFKEEVNHYSNEINKACMPFGLHRQFPENNLQMMV
QSGAKGSTVNTMQISCLLGQIELEGRRPPLMASGKSLPCFEPYEFTPRAGGFVTGRFLTG
IRPPEYFFHCMAGREGLVDTAVKTSRSGYLQRCIIKHLEGLVVQYDLTVRDSDGSVVQFL
YGEDGLDIPKTQFLQSKQFPFLASNYEVIMKSKHLHEVLSRADPKKALRHFRAIKKWHSK
HSSTLLRKGAFLSYSQKIQAAVKALNLEGKNQNGRSPEAQQILQMWYDLDEQSRQKYQKK
TAPCLDPSLSVWRPDIYFASVSETFEKKVDDYSQEWAAQAEKSYKKPELSLDRLRTLLQL
KWQRSLCDPGEAVGLLAAQSIGEPSTQMTLNTFHFAGRGEMNVTLGIPRLREILMVASAN
IKTPMMSVPVLNTKKALKRVKSLKKKLTRVCLGEVLQTVDVQESFCMGEKQNKFRVYELR
FQFLPRAYYQQEKCLRPEDILHFMETRFFKLLMESIRKKSSKASAFRSVNTRRATQKDLD
DAEESGRSRGEHEGDEEEEGNIVDAEAEEGDADASDTKRKEKQEEEVDYESEEEGEEEEE
DDEDAQEEGNICDEGTHQAHKPDEEVGSVPEEDLPQKPRRHHPGTQGAEAVERRVQAVRE
AHSFIEDYQYDTEENLWCQVTMKLPLMKINFDMSSLVVSLAHSTVVYTTKGITRCLLNET
TNSKNEKELVLNTEGINLPELFKYAEVLDLRRLYTNDIHAMANTYGIEAALRVIEKEIKD
VFAVYGIAVDPRHLSLVADYMCFEGVYKPLNRFGIRSSSSPLQQMTFETSFQFLKQATMM
GSHDELRSPSACLVVGKVVKGGTGLFELKQPLR
NT seq
5142 nt
NT seq
+upstream
nt +downstream
nt
atgttggcctccaagaacatgccctggcggcggctgcagggcatttccttcggaatgtat
tcggctgaggagctcaagaaattaagtgttaagtgcattaccaaccctcgctatgtggac
aacctggggaacccttcagcaaatggcctgtatgatttagccttgggccctgcagattcc
aaagaagtgtgctccacctgtgtgcaggacttcagcaactgctctgggcacctgggccac
attgagctcccgctcacagtgtataaccctctcctctttgataaactctacctgctactc
cgaggctcttgtttaaattgtcacatgctgacttgtcctcgggctgtgattcacctattg
gtctgccagctgagggttctggaagttggagccctacaagctgtctatgagctcgagcga
attctgaacaggtttctggaagaaaatgctgatccttctgccactgaaattcaggaagag
ttagaagaatacacaatgaaaactctgcagaacaacctcctggggtcccagtgtgcacac
gtgaaaaatgtgtgtgaaagcaggagcaaactcattgcttacttctggaaggcacatatg
actgctaagcgatgtccccactgcaagactgggcggtcggttgtccgaaaggagcacaac
agtaagctgacaatcacgtacccagccatggtgcacaagaaatctggccagaaggacaca
gagccccaagctccaggaattgaggaagctcagatggggaaacgagggtacctgacaccc
aacagtgcccaagaacatctttttgccatttggaagaatgaaggattctttttgaattac
ctgttttcgggccttggcaatgttgacacagaatccagattcaaccccagtatgttcttt
ctcgattttgtggtggtaccgccctccaggtatcgtcctgtcaatcgcctgggggaccag
gtgtttaccaatggccagacagtgaacttgcaagctgtcatgaaggatgtagttctgatc
cggaaacttctggcattgatggcccaagaacagaagctgccttgcgaggtggcagcactc
accacagacaaggataaagacttttcagttgctatggaccgatcctttttaactatgctt
ccaggccagtctctcacagacaaactttataacatttggattcgcctgcagagccatgtt
aatattgtgtttgatagtgaaatggacaaattaatgttggaaaagttccctggcattaga
cagatcctggagaagaaggagggactgttccgaaagcacatgatgggaaagcgagtagat
tacgcagcccgctcagtcatctgccccgacatgtacatcaacaccaatgaaattggcatt
cctatggtatttgccacaaaactgacctaccctcagccagttacaccctggaatgtccag
gaattgaggcagncagtcatcaacggccccaatgtgcacccaggagcctcaatggtcatc
agcgaggatggcagtcgcacagccctgagtgctgtggacataacccagcgggaggctgtg
gccaaacagctcttgacaccagccacagggacacctaagccccaggggacaaaaattgtt
tgccgacatgtaaagaacggggacattctcctactgaaccggcagccaaccctgcacaga
ccctccatccaggcccaccatgcccgcatcctgcctgaagagaaagtgctacggctccac
tatgccaactgcaaggcctacaatgctgacttcgatggagatgagatgaatgctcacttt
ccccagagtgagctgggccgggctgaagcctacgttctggcctgtaccagtcagcagtac
cttgttcccaaggatggccagccattggcgggactgatccaagatcacatggttgcaggt
gtaaacatgactattcggagttgctttttcacgcgggaacaatatatggagctggtgtac
cgaggactcaccgacaaagtggggcgcgtaaagctctttcctcctgccatcctgaagccc
tttcctctgtggactggaaaacaggttgtgtcgacactgctcataaacataatcccagag
gactacattccactgaacttatctggaaaagcaaaaatcagcgggaaagcctgggtgaaa
gaaactcctaagcctgttcctggctttaaccctgactctatgtgcgagtcccaggtgatc
atcagggaaggggagcttctctgtggagtgctggacaaggcacactatgggagctccgcc
tatggcctggtccactgctgctatgagatctatgggggcgagaccagcggcaaggttctt
acctgcctggcccgcctcttcaccgcctacctgcaactctacagaggcttcaccttgggc
gtggaagacattttggttaagccgaaggcagatgtcaaaagacagcagatcattgaagaa
tccatccactgtgggccccgggctgtcagggttgcattaaacctaccagaagctgcatca
tgtaatgaggtccgagacaaatggcaggatgcccatctgggaaaagaccagagagattat
aacatgattgaactgaagttcaaggaggaagtgaaccattacagcaatgagattaacaag
gcatgcatgcctttcggcctacacagacagttcccagagaacaacctgcaaatgatggtg
cagtcaggagccaaaggttcaactgtgaacacgatgcagatctcttgtctactgggccag
attgagttggaaggtcgaagaccaccactgatggcatcgggcaaatcactaccctgcttt
gagccttatgaattcacccccagggctggtggctttgtcactggaaggtttctcactggc
attcggcctcctgagtatttctttcactgcatggcagggcgagaaggcctggtagatact
gctgtgaaaaccagtcgctctggctatctccaaaggtgcatcatcaagcacctggaaggg
ctggtcgtccagtatgacttgacagtccgtgacagtgatggcagcgttgtgcagttcctg
tatggggaagacggcctggacatccccaagacacagttcctgcagtccaagcagttcccc
ttcctggccagcaactatgaggtgataatgaaatcaaagcatctccatgaagttttatcc
agagcagatcccaaaaaagctctccgccacttcagagccatcaaaaaatggcacagcaag
cattccagtaccctactgagaaaaggtgccttcctgagttactctcagaagattcaggca
gctgtgaaagccttgaatctcgagggcaagaaccagaatggccgcagcccagaggctcag
cagatactgcagatgtggtatgacttagatgagcagagccggcagaaataccaaaagaag
acggccccttgtcttgaccctagtctgtctgtgtggcgcccagacatctactttgcatct
gtgtcagaaacatttgaaaaaaaggttgatgactacagtcaagagtgggcagctcaagca
gagaagagttacaagaaaccagagctttctcttgacaggctgaggaccttgctgcagctg
aagtggcaacgctcgctgtgtgacccaggcgaagctgtgggtctgctggctgctcagagc
atcggggagccctccacacagatgactctgaacaccttccactttgcaggcagaggagag
atgaatgttaccctgggcattccaaggttgagggagattctcatggtggccagcgccaac
atcaagacacccatgatgagtgtgcctgtgctcaataccaagaaagccctgaagagggtg
aagagcctgaagaagaagctcaccagggtgtgcctaggagaggtgttgcagacagttgac
gtccaggagtccttctgtatgggagaaaaacagaacaaattccgggtgtatgagctgagg
tttcagttcctgccacgtgcatattaccagcaggagaagtgcctgagacctgaagacatc
cttcacttcatggaaacaagattctttaaactcctgatggagtccataagaaagaagagt
agtaaagcatcagccttcagaagcgtgaacacacgaagagctacgcagaaggatctcgat
gatgctgaggagtcagggaggagtcggggagaacatgaaggtgatgaggaagaggaaggg
aacattgtagatgctgaagccgaggagggggatgctgatgcctctgacaccaaacgcaag
gagaagcaagaggaagaggtggattatgagagtgaggaagagggggaggaggaagaagag
gatgatgaggatgcacaggaggaaggaaacatctgtgatgaaggcacccaccaggctcac
aaaccagatgaggaggtgggctcagtccctgaggaagacttgccccagaagcctcgccgt
caccatccagggacccagggagccgaggctgtggaacgtcgagttcaggctgttcgtgaa
gcccactcgttcatagaagattatcagtatgacactgaggagaatctgtggtgccaggtg
acaatgaagctccctctgatgaagattaacttcgacatgagctccctggtcgtgtccttg
gctcacagcactgtcgtctacacaactaagggcatcactcggtgcctcctgaatgaaact
accaacagtaagaatgagaaggagcttgtgctaaacacagaaggaatcaatctcccagag
ctattcaagtacgccgaggtgctggacctacgtcgtctctacaccaacgacatccatgcc
atggccaatacttatggcattgaggccgcactgcgtgtgatcgagaaggaaatcaaggat
gtgtttgctgtttatggcattgcagttgatcctcgccatctctccttggttgctgattac
atgtgtttcgagggtgtttacaagccactgaatcgctttggaattcggtctagctcctcc
cctctacagcagatgacatttgaaaccagcttccagtttctgaagcaggccaccatgatg
ggatcccacgatgagctgaggtccccatcagcctgcctcgttgtgggaaaggtcgtcaaa
ggcgggacagggctgttcgaactcaagcagcccctgagatag
DBGET
integrated database retrieval system
