Castor canadensis (American beaver): 109696703
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Entry
109696703 CDS
T04791
Symbol
Ciita
Name
(RefSeq) MHC class II transactivator isoform X1
KO
K08060
MHC class II transactivator [EC:
2.7.11.1
]
Organism
ccan
Castor canadensis (American beaver)
Pathway
ccan04612
Antigen processing and presentation
ccan05145
Toxoplasmosis
ccan05152
Tuberculosis
ccan05164
Influenza A
ccan05340
Primary immunodeficiency
Brite
KEGG Orthology (KO) [BR:
ccan00001
]
09150 Organismal Systems
09151 Immune system
04612 Antigen processing and presentation
109696703 (Ciita)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
109696703 (Ciita)
09171 Infectious disease: bacterial
05152 Tuberculosis
109696703 (Ciita)
09174 Infectious disease: parasitic
05145 Toxoplasmosis
109696703 (Ciita)
09163 Immune disease
05340 Primary immunodeficiency
109696703 (Ciita)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
ccan01001
]
109696703 (Ciita)
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
ccan04054
]
109696703 (Ciita)
Enzymes [BR:
ccan01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
109696703 (Ciita)
Protein kinases [BR:
ccan01001
]
Serine/threonine kinases: Other
TAF1 family
109696703 (Ciita)
Pattern recognition receptors [BR:
ccan04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
109696703 (Ciita)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NACHT
LRR_6
NLRC4_HD2
LRR_4
LRR_8
LRR_14
LRR_9
CARD
Motif
Other DBs
NCBI-GeneID:
109696703
NCBI-ProteinID:
XP_020035443
UniProt:
A0A8B7VUZ5
LinkDB
All DBs
Position
Unknown
AA seq
1209 aa
AA seq
DB search
MNHFQAILPCVRRLLLDQQPRQVQALLDSLLEAQLLSQEYHDALLQEPDGEALARKISLS
LVEKGDLDLAPLGWAWSWLQAPLIEWGPSYQNHGGGGQLAAMELGLPEGGYLELLHSDMD
PLHLFHFYDQMDLAGEEEIELCSEPDTDTINCEQLTKLLCDVDGDEETKEAYANIAELDQ
YVFQDSQLEGLSKDIFIEHIGLDDGISESMEVPAEAGQRTQKRPFPEEHPADLKHRKLVE
SPAVPIVTGSFLVGPASSSTLICPPPPAPFSQEPALGQTGLEEAVLVPVPPSWSSVSCLS
LPAGPLQFISTVPTLPQGLWEIPGVGTGLSGIVICHGEMPHASQAPPSSGPAVHSVPKSP
DRPGSTSPFAPSAADLPGMPEPALTSRANLAEDKMSSSPRQVCPEVSIKLPKWSETVKQF
CHSLQDKYRAEPTGPEGFLVEVGLIRARLEKGSNKSQERELAILDWAERQPASGGLAEVL
MAANDRRRPRQTRVIAVLGKAGQGKSHWARSVSRAWACGQLPQYDFVFYVPCHCLDRPGD
TYRLQDLLCPPGLQHLALDDETVSHIIRRPGHVLLILDGFEELEVQDGFLHSACGPVSPE
PCSLRGLLAGVFQGKLLRGCTLLLTARPQGRLVQSLSKADALFEVAGFSPEQAQTYIRHY
FEDSGTTEGQERAVALLQDQPFLLSHGHSPALCHTVCQLSKALLDGDTEAKLPCTLTGLY
VGLLSPATRDSPPGALAGLAQLAWDLGRRHQGTLRAAQLPSAEVRTWAVAKGLVQPVPGV
LEAELAFASFPLQCFLGAVWLALNSDIKDKELPQYLALTPRKKRPYDNWLDGLPRFLTGL
IFQPRAHCLGALLGMAVATVADRKRKVLTRYLRRLQPGTLPAARLLELLHCAHEAQEPGL
WEHMVRQLPASLSFLGTRLTPPDAQVLGTALQAAGRDFSLDLRSTGIDPSGLGSLVGLGC
VTCFRAALSDTVELWQSLQQGGETQLLQAAEQKFTIEPFKAKSPKDVEDLCSLVQTQRLR
SSSEDAAGELPAIRDLKKLEFALGPILGPKAFPKLVGILPAFASLQHLDLDSLSENKIGD
EGVLQLSATFPQLKALETLNLSQNSITDVGACQLAEALPSLATTLLRLSLYNNSICDAGA
ESLARVLPDMGTLRVMDVQYNKFTAAGAQHLAASLRKCPHVETLAMWTPTVPFGVQEHLQ
QQDSRISLR
NT seq
3630 nt
NT seq
+upstream
nt +downstream
nt
atgaatcacttccaggccattctgccctgcgtccggagactgctcttggatcagcagccc
aggcaggttcaggcactcctggacagcctgctggaggcccagctcctctcccaggagtac
catgatgccctgcttcaagagccagatggtgaggctctagccaggaagatctccctgagc
cttgtggagaaaggggacctggacttggcccccttgggttgggcctggagctggctgcag
gccccactgatcgagtggggccctagctaccagaatcatggtggcggtggacagcttgca
gccatggagctggggttgccagaaggcgggtatctggagctcctgcacagcgacatggat
cccctgcacctcttccacttctatgaccagatggacctggccggtgaagaagagattgag
ctgtgctcagagcctgacacagacaccatcaactgcgagcagctcactaagctgctgtgt
gacgtggatggggatgaagagaccaaggaggcttatgccaatattgcggaactggaccag
tacgtgttccaggactcccagctggaaggcctgagcaaggacattttcatagagcacatt
ggattggatgacggcatcagcgagagtatggaggtgccagcagaagccgggcagagaacc
cagaaaagacccttcccagaggagcaccccgcagacctgaagcacagaaagctagttgag
tcccctgctgtacccatagtgactggcagtttcctagttgggccagccagcagctccacc
ctgatctgtccgccaccacctgctccattcagccaagagccagcactgggccagactggc
ctggaggaagctgtcctggtgcccgtgcccccatcctggtcctccgtgagctgcctcagt
ctccctgctgggcccttgcagttcatctccactgtccccaccctgccccagggactctgg
gaaatcccaggagtggggacagggctctcgggtattgttatctgccatggtgagatgccc
catgccagccaagcacccccttccagtggccctgctgttcacagtgtcccaaagtcccca
gaccggcctggctccaccagtccctttgctccatctgccgctgacctgcccggcatgccg
gaaccggccctgacgtcccgtgcaaatttggcagaggacaaaatgtcctcctccccacgc
caagtgtgtccagaagtctccatcaagcttccaaaatggtctgagacagtgaagcagttc
tgccactcactgcaggacaagtatcgtgctgagcccacaggcccggagggcttcctggtg
gaggtggggctgataagggccaggctggagaaaggcagcaacaagagccaggagagggag
ctggccatactggactgggcggagcggcagccggccagcgggggtctggccgaggtgctg
atggctgcgaatgaccgccgacgaccacggcagacgcgagtgattgccgtgctgggcaag
gctggccaaggaaagagccactgggcccggtcagtgagccgggcctgggcctgcggccag
ctcccacagtatgactttgtcttctacgtcccctgccattgcttggaccgtccaggggac
acctaccgtctgcaggacctgctctgtcccccgggcctacagcacctggccttggacgac
gagactgtcagccatatcataaggaggcccggccatgtcttgctcatcctggatggattt
gaggaacttgaggtccaggatggcttcctgcacagtgcgtgcggacccgtgtccccagag
ccctgctccctgcggggactgctggctggcgtgttccaggggaagctgctgcgaggctgc
acgctgctcctcaccgcccggccccagggccgtctggtccagagcctcagcaaggccgac
gccctgttcgaggtggccggcttctcgccggagcaggcccagacgtacatcagacattac
tttgaggactcagggacaacagagggccaggagagggccgtggcactcctacaggaccag
ccgtttctcctcagccatgggcacagccctgccctgtgccacacggtgtgccagctgtcc
aaggccctgctggacggggacacagaggcaaagctgccctgtacactcacgggactctat
gttggcctactcagccctgcgacccgggacagtcccccgggggccctggcagggctggcc
cagctggcctgggacctgggccgcagacaccaaggtacccttcgggcagctcagctgcca
tcggcagaggtgaggacctgggcggtggccaagggcttggtgcagccggtgcctggagtc
ttggaggctgagctggcctttgccagttttcccctgcagtgcttcctgggggccgtgtgg
ctggccctgaacagtgacatcaaggacaaggagctgcctcagtacctggcattgaccccg
aggaagaagaggccctatgacaactggctggacgggctgcctcgctttctcaccgggctc
attttccagcctcgtgcccactgcctgggggccctgctggggatggcggtggccacggtg
gctgaccggaagcgcaaggtgctcaccaggtacctgaggcggctgcagccggggacactg
ccggccgcgcggctgctggagctgctgcactgcgcccacgaggcacaggagcccgggctc
tgggagcacatggtgcgccagctccccgccagcctgtccttcctgggcacccggctcacg
ccccccgatgcacaggtcctgggcacggccttgcaggcggccggccgagacttctccctg
gacctccgcagtactggcattgacccctctggactggggagcctcgtgggacttggctgt
gtcacctgcttcagggccgccttgagtgacacagtggagctgtggcagtccctgcaacag
ggtggggagacccagctcctccaggcagcagagcagaagttcaccattgaaccgtttaag
gccaagtccccgaaggacgtggaagatctgtgcagcctggtccagacccaaaggttgaga
agctcctcggaggacgcagctggggaacttcctgccatccgggacttgaagaagctggag
tttgcgctgggccccatcttgggccccaaagctttccccaagctggtggggatcctgccg
gccttcgcctcccttcagcacctggacctggactccctgagcgagaacaagatcggggac
gaaggcgtcttgcagctgtcggccacctttccgcagctgaaggcactggagaccctcaac
ctgtcccagaacagcatcacagatgtgggtgcctgccagcttgccgaagctctgccctcc
cttgccacgaccctgctgaggctcagcttgtacaataactccatctgcgacgcgggagcc
gagagcctggcacgtgtgcttcccgacatggggacgctgcgggtgatggacgtccagtac
aacaagttcacagccgcaggtgcccagcacctggctgccagcctgaggaagtgcccgcac
gtggagaccctggcgatgtggacgcccaccgtcccctttggtgtccaggaacatctgcag
caacaggactctcggatcagcctgagatga
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integrated database retrieval system
