Castor canadensis (American beaver): 109697056 Help Entry 109697056         CDS       T04791                                  Symbol Patl1 Name (RefSeq) protein PAT1 homolog 1   KO K12617   DNA topoisomerase 2-associated protein PAT1 Organism ccan  Castor canadensis (American beaver) Pathway ccan03018   RNA degradation Brite KEGG Orthology (KO) [BR:ccan00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    03018 RNA degradation     109697056 (Patl1)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:ccan03019]     109697056 (Patl1) Messenger RNA biogenesis [BR:ccan03019]  Eukaryotic type   mRNA surveillance and transport factors    mRNA cycle factors     P-body specific factors      109697056 (Patl1)   mRNA degradation factors    5'-3' decay     Decapping complex      109697056 (Patl1) SSDB OrthologParalogGFIT Motif Pfam:  PAT1 Motif Other DBs NCBI-GeneID:  109697056 NCBI-ProteinID:  XP_020036050 UniProt:  A0A8B7W0V9 LinkDB All DBs Position Unknown AA seq 875 aa AA seqDB search MSCQLGRPRTGGACAVCLHGTSFPPLVLGSGTPNLSPRSRRRRAPSGATALPEARLRTFP RTLRRTAAARGREPVEDPRAEEPGESALLPSLPHSPPRSLPPSPRMFRYESLEDCPLDED EDAFQGLGEEDEEIDQFNDDTFGSGAVDDDWQEAHERLAELEEKLPMAVNEQTGNGERDE MDLLGDHEENLAERLSKMVIENELEDPAIMRAVQTRPVLQPQPGSLNSSIWDGSEVLRRI RGPLLSQEMPTVSVLEYALPQRPPQGPEDDRDLSERALPRRSTSPIIGSPPVRAVPIGTP PKQMAVPSFNQQILCPKPVHVRPPMPPRYPAPYGERMSPNQLCSVPNSSLLGHPFAPSVP PVLSPLQRAQLLGGAQLQPGRMSPSQFARVPGFVGSPLAAMNPKLLQGRVGQMLPPAPGF RAFFSAPPTATPPPQQHPPGPGPHLQNLRSQAPMFRPDTTHLHPQHRRLLHQRQQQNRNQ HRNLNGAGDRGSHRSSHQDYLRKDPYANLMLQREKDWVSKIQMMQLQSTDPYLDDFYYQN YFEKLEKLSAAEEMQGDGPKKERTKLITPQVAKLEHAYKPVQFEGSLGKLTVSSVNNPRK MIDAVVTSRSEDDETKEKQVRDKRRKTLVIIEKTYSLLLDVEDYERRYLLSLEEERPALI NERKHKICSMYDNLRGKLPGQERPTDDHFVQIMCIRKGKRMVARILPFLSTEQAADILMT TARNLPFLIKKDAQDEVLPCLLSPFSLLLYHLPSVTVTSLLQQLMNLPQSAAAPAPSNPH LTAVLQNKFGLSLLLVLLSRGEDLQSSDPTKESMQNNQWTEVMFMATRELLRIPQAALAK PISIPTNLVSLFSRYVDRQKLNLLETKLQLVQGIR NT seq 2628 nt NT seq  +upstreamnt  +downstreamnt atgtcctgccagctgggacgccctaggacgggcggcgcgtgcgcagtctgtctccacggg acctccttcccgccgctggtactgggaagcgggacgccaaatctgtccccgcgcagccgc cgccgccgggcgcccagcggggcgaccgccctgcccgaggcgcgcctgcgcacgttccca cgcacgctccggcgtacggcggcggccaggggtcgcgagccggtggaggacccgcgcgcg gaggagcccggggagtcggcgcttcttccctccctcccccactcccctccccgctccctc cccccctccccaagaatgttccgctacgagtctttggaggattgtcctctagatgaagat gaagatgcatttcagggcctgggagaagaggatgaagagattgaccaattcaatgatgat acatttgggtcaggtgcagttgatgatgattggcaggaagcacatgagcgcctggctgag ttggaagagaagctaccaatggcagttaatgagcaaacaggcaatggagagagagatgaa atggacttgttgggtgaccatgaggagaatctggcagaaagactcagtaagatggtgatt gaaaatgaactagaagatccagctatcatgagggcagtgcagaccaggccagttttacaa cctcaacctggaagtctgaattccagtatctgggatggatctgaagttctgaggcgaatc cgaggaccactactttctcaggaaatgcctacggtgtctgtattagaatatgccttgcct cagaggcctccacagggcccagaagatgatcgggacctttctgagcgtgcattaccaagg cgatcaacttcacctatcattggaagtcctcctgttagagctgtccccattggcacacca cctaagcagatggctgtacccagcttcaaccaacagattctgtgtccgaagcctgtccat gttcggcccccgatgccaccacgttatcctgctccctatggtgagaggatgtctccaaac cagctgtgcagtgtcccgaactcttctctcctgggtcacccttttgctcctagtgttcct cctgttctcagccctctccagagagcacagcttcttggaggagcacagttacagcctgga cggatgtctcccagccagtttgcacgggtccctggatttgttggtagcccactggctgcc atgaatcccaagctgctgcaagggcgagttgggcagatgcttcccccagcaccaggcttc cgtgccttctttagtgctccacccaccgccacaccacctccacagcagcaccctcctggc ccaggacctcatctgcaaaacctaagatctcaggccccaatgtttagaccagacacaact caccttcatccacagcaccggcgactcttgcatcagagacagcaacagaatagaaatcag catcggaatctcaatggtgctggagatcgaggaagtcaccggagcagtcatcaagattat ctccgaaaggatccatacgccaatctcatgctgcagcgggagaaagattgggtctctaaa atccagatgatgcagctgcaaagcactgacccctacctggatgatttttattaccagaat tactttgaaaaactggagaaactgtcagctgctgaagaaatgcaaggtgatggccctaag aaggagcgcaccaagctcatcacccctcaggtggccaaactggagcatgcctataagcca gtgcagtttgagggctctttggggaagctcactgtctctagtgtgaataatcctcgaaaa atgattgatgctgttgtgacctctcggagtgaggatgatgaaacaaaagaaaaacaggtt cgggacaagagaagaaaaacgcttgtcataattgagaaaacatacagtttactccttgat gtggaggactatgaaaggcgctatctcctaagtcttgaagaagagcggcctgccctgatc aatgaaagaaagcacaaaatctgcagcatgtatgataacttgaggggcaaattgcctgga caggagaggccaactgatgatcactttgtgcagatcatgtgtatccgaaaagggaagaga atggttgcccgtattctccctttcctctccacagagcaagcagctgacattctcatgaca actgccaggaacctcccttttcttatcaaaaaggatgcacaagatgaggtgctgccatgc ttattgagtcccttctctctccttctctatcatcttccatcagtgactgtcaccagcctt ctgcaacagctaatgaacctacctcaaagtgcagctgcaccagcaccctccaatcctcac ctcactgctgtgctccagaacaagtttggcctgtcactgcttcttgtcctcctgagccgt ggggaagacctacagagttcagaccccactaaagaatcaatgcaaaataatcagtggacg gaggtaatgttcatggcaacccgagaacttctacgaattccccaagcagccttggccaag ccaatctctatacccacaaaccttgtgtcccttttttctcgctacgttgaccggcagaaa ctgaacttgctggagacaaaactgcagctagttcaggggatacgataa

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