Castor canadensis (American beaver): 109697137
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Entry
109697137 CDS
T04791
Symbol
Smarcad1
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 isoform X1
KO
K14439
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 [EC:5.6.2.-]
Organism
ccan
Castor canadensis (American beaver)
Pathway
ccan04550
Signaling pathways regulating pluripotency of stem cells
Brite
KEGG Orthology (KO) [BR:
ccan00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04550 Signaling pathways regulating pluripotency of stem cells
109697137 (Smarcad1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ccan03036
]
109697137 (Smarcad1)
Chromosome and associated proteins [BR:
ccan03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
109697137 (Smarcad1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
HDA2-3
ERCC3_RAD25_C
CUE
TTC3_9th
Motif
Other DBs
NCBI-GeneID:
109697137
NCBI-ProteinID:
XP_020036139
UniProt:
A0A8B7VXN3
LinkDB
All DBs
Position
Unknown
AA seq
1033 aa
AA seq
DB search
MNLFNLDRFRFEKRNKVEEAPEATPQLPQPPQPGPSSPISLSAEEENAEGEVSRANTPDS
DITEKTEDSSVPEPPDNERKASVSCFKNERGIQYIDLSSDSEDVVSPNCSNAVQEKKFNK
DTVIIVSEPSEDEESQGLPSVARRNDDISELEDLSELEDLKDAKLQTLKELFPQRSDNDL
LKLIESTSTMDGAIAAALLMFGDAGGGPRKRKLSSSSEPYEEDEFNDDQSLKKTRLDHGE
ESNESVESSSNWEKQESIVLKLQKEFPNFDKQELREVLKEHEWMYTEALESLKVFAEDQD
MQYASQSEVPNGKEVSSRNQNYPKNTAKTKLKQKFSMKPQNGFNKKRKKNVFNAKKVAED
SEYDSGSDVGSSLDEDYSSGEEVMEDGYKGKILHFLQDASIGELTLIPQCSQKKAQKITE
LRPFNSWETLFTKMSKTNGLSEDLIWNCKTLIQERDVVIRLMNKCEDISNKLTKQVTMLT
GNGGGWNIEQPSILNQSLSLKPYQKVGLNWLALVHKHGLNGILADEMGLGKTIQAIAFLA
YLYQEGNKGPHLIVVPASTIDNWLREVNLWCPTLNVLCYYGSQEERKQIRFNIHSKYEDY
NVIVTTYNCAISSSDDRSLFRRLKLNYAIFDEGHMLKNMGSIRYQHLMTINANNRLLLTG
TPVQNNLLELMSLLNFVMPHMFSSSTSEIRRMFSSKTKSADEQSIYEKERIAHAKQIIKP
FILRRVKEEVLKQLPPKKDRIELCTMSEKQEQLYLGLFNRLKKSINNLEKNTEMCNVMMQ
LRKMANHPLLHRQYYTAEKLKEMSQLMLKEPTHCEANPDLIFEDMEVMTDFELHVLCKQY
RHINSFQLDMDLILDSGKFQALGRILSELKQKGDRVVLFSQFTMMLDILEVLLKHHQHRY
LRLDGKTQISERIHLIDEFNTDMDIFVFLLSTKAGGLGINLTSANVVILHDIDCNPYNDK
QAEDRCHRVGQTKEVLVIKLISQGTIEESMLKINQQKLKLEQDMTTVDEGKLFVSRNVNI
INILIYELTIAGG
NT seq
3102 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttttcaacttggatcgttttcgctttgagaaaagaaataaggttgaggaagct
cccgaagcaaccccccagcttccccaacccccgcaacccggcccttcttcaccaatttct
cttagtgctgaagaggagaatgctgaaggggaagttagcagggcaaatacccccgattca
gatataactgaaaaaacagaagattctagtgttccagaacctccagataacgaaagaaaa
gcaagtgtatcatgtttcaagaatgaaagaggaatacagtatattgatttgtcttctgat
agtgaagatgttgtttccccaaattgctccaatgcagtgcaagagaaaaaatttaacaaa
gacacagtgattatagtttctgaaccatctgaagatgaagagtcccaaggccttccttcc
gtggcacgaagaaatgatgatatttcagaactggaagatctttcagaattggaagatctt
aaagatgccaagcttcagaccttgaaggaactttttccacaaagaagtgacaatgattta
cttaagttaattgaatcaacaagcactatggatggagcaattgctgctgccttgctgatg
tttggtgatgcaggtggtggacccaggaaaagaaaattatcatcttcttcagagccatat
gaggaggatgaatttaatgatgatcaatctttaaaaaagacaagacttgatcatggagaa
gaatctaatgagtctgtagagtctagcagtaattgggaaaagcaggaaagtattgtattg
aaattgcaaaaggaatttcccaattttgataaacaggaattaagagaagtgctcaaggaa
catgaatggatgtacacagaagctttagagtctctaaaagtttttgcagaagaccaagat
atgcaatatgcatcacaaagtgaggtcccaaatggaaaagaagtttcttcaaggaatcaa
aattatcctaaaaatacagctaaaacaaaactgaaacagaaattttccatgaaaccacaa
aatggttttaacaagaaacgtaaaaaaaatgtatttaatgctaagaaagtcgctgaagat
tctgaatatgattcaggttctgatgtcggtagttcactagatgaggactatagtagtggt
gaagaagtgatggaggatggctataaaggtaaaattcttcacttcctccaagatgcttca
attggtgaactgactttgattcctcagtgttctcagaaaaaggctcagaagataacagaa
ctccggccctttaatagttgggaaactctgttcacaaagatgtccaaaactaatggctta
tcagaagatttgatatggaactgtaaaacgctgatccaagaaagggatgtagttataaga
cttatgaataaatgtgaagacatttcaaataaattgaccaagcaggttaccatgctcact
ggaaatggaggtggatggaacatagaacaaccttccattctaaaccaaagtttgtcactc
aagccctatcagaaggttggtttgaattggctggcattggtacataaacatggactaaat
ggtattttggcagatgaaatgggcctaggaaaaaccattcaagctattgcattcctggcg
tacctgtatcaggagggtaacaaaggccctcatttgattgttgttccagcttcaactata
gataactggttaagagaagttaatttatggtgccccactttaaatgtgctctgttactat
ggttctcaagaagagcggaaacaaattagatttaatatccatagtaaatatgaagactac
aacgtaattgtgaccacgtataattgtgcaattagcagttctgatgaccggagtctgttt
agacggctgaaacttaactatgcgatttttgacgagggccatatgctgaagaatatgggc
tccattcgctaccagcaccttatgacaattaatgcaaataaccgtttgctgctcacaggc
acgcctgtgcagaacaacctgctggaactcatgtcgctgttgaactttgttatgccacac
atgtttagtagtagcaccagtgaaatacgaaggatgttttcttctaaaacaaaatccgca
gatgagcagagtatatatgaaaaggaaagaatagcacatgcaaagcaaattataaagcca
tttattctcagaagagtgaaagaggaggttctgaagcaactaccccccaagaaagatcga
attgagttgtgtacaatgtcagagaaacaggagcaactctacttgggtcttttcaacaga
ttgaaaaaatccattaataacctggaaaaaaacacagaaatgtgcaatgtaatgatgcaa
ttgagaaaaatggccaatcatcctttattgcatcgccagtattacactgctgaaaaactc
aaggaaatgtctcaacttatgctaaaagaacctacacattgtgaggccaaccctgacctg
atctttgaagatatggaagtaatgacagactttgaactgcatgtgctttgtaaacagtat
cgacacattaacagtttccagctagacatggatttgattttagattctggaaaattccaa
gctttaggacgcatcttatctgaattgaaacagaagggtgacagagttgtattatttagc
caatttaccatgatgcttgatattttagaggttctcttaaaacatcatcagcataggtac
ctcagattagatggaaaaactcaaatttctgaaaggatccatctaattgatgagtttaat
accgatatggatatctttgtgtttctcttgtcaacaaaagctggtggattaggaataaat
ctgacttcggcaaatgttgttatacttcatgatattgattgtaatccttacaatgacaaa
caagcagaagatagatgtcacagagtgggtcagactaaagaagtactagttattaaatta
ataagccaaggcacgatcgaagaatccatgctaaaaattaaccaacagaagttgaaacta
gaacaggatatgaccacagtagatgaaggtaagctgtttgtaagcagaaatgttaacatt
attaatatattaatatatgaattaactattgcaggaggataa
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