Castor canadensis (American beaver): 109697146
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Entry
109697146 CDS
T04791
Symbol
Srsf1
Name
(RefSeq) serine/arginine-rich splicing factor 1
KO
K12890
serine/arginine-rich splicing factor 1
Organism
ccan
Castor canadensis (American beaver)
Pathway
ccan03040
Spliceosome
ccan04657
IL-17 signaling pathway
ccan05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ccan00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109697146 (Srsf1)
09150 Organismal Systems
09151 Immune system
04657 IL-17 signaling pathway
109697146 (Srsf1)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
109697146 (Srsf1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ccan03041
]
109697146 (Srsf1)
Spliceosome [BR:
ccan03041
]
Common components
Common spliceosomal components
SR proteins
109697146 (Srsf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_3
RRM_7
Nup35_RRM_2
CoV_nucleocap
DDE_Tnp_1
Motif
Other DBs
NCBI-GeneID:
109697146
NCBI-ProteinID:
XP_020036154
UniProt:
A0A8B7VXP3
LinkDB
All DBs
Position
Unknown
AA seq
253 aa
AA seq
DB search
MSGGGVIRGPAGNNDCRIYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVE
FEDPRDAEDAVYGRDGYDYDGYRLRVEFPRSGRGTGRGGGGGGGGGAPRGRYGPPSRRSE
NRVVVSGLPPSGSWQDLKDHMREAGDVCYADVYRDGTGVVEFVRKEDMTYAVRKLDNTKF
RSHEGETAYIRVKVDGPRSPSYGRSRSRSRSRSRSRSRSNSRSRSYSPRRSRGSPRYSPR
HSRSRSHISEEMD
NT seq
762 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggaggtggtgtgattcgtggcccagcagggaacaacgactgccgcatctacgtg
ggtaacttacctccagatatccgaaccaaggacattgaggacgtgttttacaaatacggc
gctatccgtgacatcgacctcaagaatcgccgcgggggaccgcccttcgccttcgttgag
ttcgaggacccgcgggacgcggaagacgcggtgtacggtcgcgacggctatgattacgac
gggtaccgtctgcgggtggagtttccccggagcggccgcggtacaggccgaggcggcggc
gggggtggaggtggtggagctccccgaggccgctatggccccccatccaggcgatctgaa
aacagagtagttgtctctggactgcctccaagtggaagctggcaggacttaaaggatcac
atgcgtgaagcaggtgatgtatgttatgctgatgtttaccgagatggcactggtgtcgtg
gagtttgtacggaaagaagatatgacctatgcagttcgaaaactggataacactaagttt
agatctcacgagggagaaactgcctacatccgggttaaagttgatgggcccagaagtcca
agttatggaagatctcgatctcgaagccgtagtcgtagcagaagccgtagcagaagcaac
agcaggagtcgcagttactccccaaggagaagcagaggatcaccacgctattctccccgt
catagcagatctcgctctcacatatctgaagagatggattaa
DBGET
integrated database retrieval system
