Castor canadensis (American beaver): 109697267 Help Entry 109697267         CDS       T04791                                  Symbol Pdcd11 Name (RefSeq) protein RRP5 homolog isoform X1   KO K14792   rRNA biogenesis protein RRP5 Organism ccan  Castor canadensis (American beaver) Brite KEGG Orthology (KO) [BR:ccan00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03009 Ribosome biogenesis [BR:ccan03009]     109697267 (Pdcd11) Ribosome biogenesis [BR:ccan03009]  Eukaryotic type   90S particles    Other 90S particles     109697267 (Pdcd11) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  S1_RRP5 S1 Spt6_S1 HAT_PRP39_N HAT_Syf1_CNRKL1_N HAT_Syf1_CNRKL1_C HAT_PRP39_C Suf OB_RRP5_4th OB_RRP5 TPR_14 TPR_19 ARM_TT21 UTP6_C DUF2110 HAT_Syf1_M ARM_TT21_5th PPR DUF7017 Motif Other DBs NCBI-GeneID:  109697267 NCBI-ProteinID:  XP_020036360 UniProt:  A0A8B7VXE3 LinkDB All DBs Position Unknown AA seq 1876 aa AA seqDB search MAALEESFPRGGTRKIHKSEKPFQQLVEQDNLFNISNEEEPTKRKKQQKEPAKIKKLKIE KKASKKSIKEKFEILSIESLCEGMRILGCVKEVNELELVISLPNGLQGFVQVTEICDAYT KKLNEQVAQEEPLKDLLRLPELFSPGMLVRCVVSSLDIKERGKKSVKLSLNPKNVNRVLS AEVLKPGMLLTGTVSSLEDHGYLVDIGIGGTRAFLPLQKAQEYIRQKNKGAKLNVGQYLT CIIEEVKSNGGVVSLSIGHSEISAAFATEEQNWTLNNLLPGLVVRAQVQKVTQFGLTLNF LTVFTGLVDFMHLEPKKVGTYFSNQAVRACILCIHPRTRAVRLSLRPVFLQPGRPLVRIS CQHLGAVLDDVPVQGFFSKAGATFRLKDGALAYARLSHLSNSKKVFNAEAFKPGNTHRCR IIDYSQMDELALLSLRTSVIEAQYLRYHDIKTGAVVKGTVLTIKPFGILVKVGEQMRGLV PPMHLADILIKNPEKKYHIGDEVKCRVLLCDPEAKKLIMTLKKTLVMSKLPAITCYDDAK PGLQTHGFIIRVKDYGCIVKFYNDIQGLVPKHELSAQYISDPEKVFYIGQVVKVVVLNCE PSKERMLLSFKLLNDPEPKNKSVGNGQKKGKVVNTGQLVDVKVLEKTKDGLEVAVLPHNI PAFLPTPHLSDHVANGPLLYHWLQAGDTLHRVLCLSQSEKHVLLCRKPALVSTVAGGQDP KSFSEIQPGMLLIGFVKSIKDYGVFVQFPSGLSGLAPKGIMSDKFVTTPSDHFVEGQTVV AKVTNVDEEKQRMLLSLRLSDCALGEPASTSLLLLSQCLEELQGVRSLMSSRDSVLIQTL AEMTPGMVLDLVVQEVLEDGSVVFSGGPVPDLVLRASRYHRAGQVVESGEKKKVVILNVD MLKLEVHVSLSWDLVNRRTKKLKKGSQHQAIVQHLEESFAVASLVETGHLVAFSLTSHLN DTFRFDSEKLQVGQGVCLTLKTTEPGVTGLLLAVEGPAAKRTMRQTRKDSETVEEEEEEE EPALAGTQKKHTLAIGDIVTGTVKSIKATHVVVTLEDGIIGCIHASHILDDVPVGTSPTT KLKVGKTVTARVIGGRDVKTLKFLPISHPRFIRTILELSVRPRELEKNGHTALDTYSISP VEKIKQYRTGQTVTCFLKRYNVVKKWLEVEIAPDIRGRIPMLLTSLSFKVLKHPDKKFQI GQALKATVVGPDSSKAFLCLSLIGPHKLEKGELAMGRVVKVIPYKGLTVAFPFGKMGRVS IFHLSDSYSEAPLEDFVPEKIVRCYVLSSEDHELTLSLRSSRTNPETKSKIEDPEINSIQ DIKEGQVLRGYVKSVQSNGVLLGLGPSVVGLAQYSYVSQCSWPKNDLDSKYLPEGKLLTA KVLSLNYQKNLIELSLLPSDTGKPDVFSTSLDLPLLKQEERRGEAKERDQKEEKEKKKSQ KRKKKKKSLKGQVEVKLHSQEKKEPQRPQGKQGKRERQESESEQERVNKKPKKAGALEED DSSVEVYYREGEEEIEEPNVLPKGKQAKPAEVPRLQLSSGFLWDVGLDSLTPALPPRGES SDSEEDEKPHQPTQKKKSKKERELEKQKVEKELCRIEEALMDPGRQPESADDFDRLVLSS PNSSILWLQYMAFHLQATEIEKARAVAERALKTISFREEQEKLNVWVAFLNLENMYGSQE SLSKVFERAVQYNEPLKVFLHLADIYTKSGKLKEAGELYNRMLKRFHQEKAIWVKYGAFV LRGSQAGASHRVLQRALECLPTKEHVDVISKFAQLEFQLGDAERGKAIFESILSTYPKRT DVWSVYIDMLIKHGSQKEVRDIFERVIHLSLAPKRMKFFFKRYLDFEKQHGTEKDVQAVK TKALEYVEAKSSVLED NT seq 5631 nt NT seq  +upstreamnt  +downstreamnt atggcagccctagaagaaagcttcccccgaggaggtacgaggaagatccacaaatcagag aaacctttccagcagttagttgaacaagacaacttatttaatatttccaatgaagaagaa cccaccaaaaggaagaagcagcagaaagagccagcaaaaattaaaaagttgaaaattgaa aagaaagcaagcaagaagtctataaaagagaagttcgaaatccttagtattgagtcacta tgtgagggaatgcggattttgggttgtgtgaaagaggtaaatgaactggaactggtgatc agtctacctaatggccttcaggggtttgtgcaagtgactgaaatctgtgatgcctatacc aaaaagttgaatgaacaggtggcacaagaagaacctctgaaggacctacttcgcttacct gaacttttttcacctggaatgctggtaagatgtgtggtgagcagcctagacatcaaagag aggggcaaaaagagtgtcaagctatctctgaatcccaaaaatgtcaacagagtgctgagt gctgaggtcctgaagcctggcatgctgctgacaggcacagtgtcaagcctggaagaccat ggctacctagtggatattggtattggtgggaccagagcttttctgcctctgcaaaaagcc caggagtacattcgacagaagaacaaaggtgccaaactgaatgtgggtcagtacctgact tgcatcattgaagaggtgaaaagcaatggaggagttgttagtctgtctataggacattca gagatttctgctgcctttgcaactgaggagcaaaattggacccttaataacttgctgcca gggctggtggtcagagcccaggtacagaaggtgactcagtttggcctcacgctaaacttc ctcacggtcttcactggcctggttgacttcatgcacctggagcccaagaaagttgggaca tatttctcaaaccaagcagtgagggcctgcattctctgcatccatcctcggacaagagct gtgcgcctgagcctgcgccccgtcttcctgcagcctgggcggccgctcgtccggatctct tgccagcacctaggagctgtgctggatgatgttcctgtccaggggtttttcagtaaggct ggggccaccttcaggctgaaggatggggctctggcctatgcccggctcagtcatctctct aattctaagaaagttttcaatgctgaggccttcaagccagggaatactcacaggtgtaga attattgactatagtcaaatggatgaactggccttgctttctctgaggacatctgttatt gaagctcaatatcttagatatcatgatatcaaaactggggccgtcgtaaagggcacagtg ttgactataaaaccatttgggatactggtaaaggtgggtgagcaaatgagaggcctggta cctcccatgcaccttgctgacatcctgataaagaatccagagaagaagtaccacattggg gatgaggtcaagtgccgggttttgctttgtgaccctgaagccaaaaagctgataatgacc ctgaagaaaaccctggtcatgtccaaactacctgccattacctgctatgatgatgccaag cctggtctacagacacatgggttcatcatcagggtcaaggactatggctgtattgtaaag ttctacaatgacatccagggactggtgcccaagcatgaactcagtgcccagtacatctct gatccagagaaggtcttttacattggtcaggtggtgaaggttgtagtgctgaactgtgaa ccatccaaagagagaatgctcttatccttcaagctgttgaacgatccagaaccaaagaac aagagtgttggaaacggtcagaaaaaaggaaaagtcgttaatactgggcagttggtggat gtgaaggttttagagaagaccaaagatgggctggaggtggccgtcctgcctcacaacatc cctgctttcctccccacacctcatctgtcagaccatgttgccaatggcccgctgttatat cactggctccaggcaggtgacacccttcaccgagtcttgtgtctgagccagagtgagaag catgttctcctttgcaggaagccagctttggtctccacagtagcaggtggccaggatccc aagagcttctcagaaatccagcctggaatgctgctcattggttttgtgaagagcatcaag gactacggtgtgttcgtccagttcccctcaggtcttagtggactggcccccaaaggtatc atgagtgacaagtttgtgaccaccccaagtgaccactttgttgaagggcagacagtggtt gcaaaggtgaccaatgtggatgaggagaagcagaggatgctgctgtcgctgcggctgtca gactgcgctttgggggagccggccagcaccagcctcctcctcctaagccagtgcctggag gagctgcaaggcgtgcggagcctcatgagcagtcgagactctgtgctgatccagacactg gctgagatgactccagggatggttcttgacctagtggtgcaggaagtattggaggatggt tccgtggtgttcagtgggggcccagtgcctgacctggttttgagagccagcagataccat cgggcaggacaggtggtggaatctggggagaagaagaaggttgtaatcctcaatgttgat atgttgaagttggaagtgcatgtttccctttcctgggacttggtgaatagaagaactaaa aagctgaaaaaaggcagccagcatcaggcaattgtgcagcacctggaggagtcctttgcc gtggcctccttagtagagactggccacctggtagctttctccctgacctctcacctcaac gacaccttccgttttgactctgagaagttgcaggtgggacagggtgtctgtctaaccctc aagaccacagaaccgggagtgactggtcttcttttggctgttgaggggccagctgctaag aggaccatgagacagactcggaaggattctgagacagttgaggaggaggaggaggaggag gaaccagctctggctgggactcagaagaagcacaccctagctattggggacattgtcact gggactgtcaagtctattaaggccacccatgtggttgtgactctggaagatggcatcatt ggctgtatccatgcctcccacatactagatgatgttccagtgggcacctctcctactacc aagctgaaagttgggaagacagtcactgcccgagtgattggtgggcgagatgtgaagaca ctgaagttcctaccaattagtcaccccagatttattcgaaccatcttggagttgagtgtt cggccaagggaactggaaaaaaatggccacactgctcttgacacttactctataagccct gtggagaagattaagcagtaccggactggtcagactgtgacttgcttcttaaagaggtac aatgtcgttaagaaatggcttgaggtggagattgcaccggacatccgagggagaattccc atgttgctcacttctcttagtttcaaggttctaaaacatccagataagaagtttcagatt ggccaggccttgaaggctactgtggttggccccgattcctccaaggccttcttgtgtctc tcactcataggtcctcataagcttgagaaaggggagctggccatgggccgagtggtgaag gtgattccttacaaggggctgactgtcgccttcccctttgggaaaatggggagagtcagt atatttcacctgagtgactcctactctgaggcacccctagaagactttgtccccgagaag attgtcaggtgttatgtcctatccagtgaggaccatgaattgactttgtcactgcgatca tccaggacaaacccagagacaaaaagcaaaatagaagatccagagattaactccatccag gacattaaggaagggcaggtccttaggggctacgtgaagtctgtccagtcaaacggtgtg ctcttggggcttggcccatcagttgtgggtttggcccagtactcatatgtgtcccagtgt agctggcccaagaatgaccttgatagcaaatacctccctgaagggaagctgcttactgcc aaggtcctaagcctgaactaccagaagaatctgatagagctgtcgctcctccccagtgat actgggaagccagatgtgttttctacctccctggatctgccacttctgaagcaagaggag agaagaggagaggccaaggagagggaccaaaaagaagagaaggagaagaagaagagtcag aaaaggaaaaaaaagaagaagagcctgaaggggcaggtagaagtgaagctacacagccag gagaagaaagagccccagagaccacaggggaagcagggcaagcgggaacgccaggagtct gagagtgagcaggaaagagtgaacaagaagccaaagaaggctggtgcgttggaggaggat gacagtagtgtggaagtttattatcgggagggagaagaggagatagaggagccaaatgtg ctgcccaaggggaagcaggctaaacctgcagaagtgccccggctgcagctctcttcaggt ttcctttgggacgtggggctcgactctctgaccccagccttaccacctcgaggagagagc tcggacagcgaggaggatgagaagccacaccaacccacgcagaaaaagaaaagcaagaag gaaagagagttggagaagcagaaggtggagaaagagctgtgccgcatcgaagaggcactc atggatcccgggcgacagccggagtcagcagatgactttgaccggctggtcctgagctcc cccaacagctccatcctatggctgcagtacatggctttccacctgcaggccacggagatc gaaaaggcccgggctgtggctgagagggccttaaagaccatctccttcagagaggagcag gagaaactgaacgtgtgggtggcatttctgaacctggaaaacatgtatggctctcaggag tccctgtccaaggtctttgagcgggctgtgcagtacaacgagcctctcaaggtctttctc catctggctgacatctataccaagtctgggaagttgaaggaagctggtgagctgtacaac cggatgctgaagcgtttccatcaggagaaagctatctgggtcaaatatggtgcctttgtt ctgcgggggagtcaagctggggccagtcaccgtgtgttacagcgagcccttgagtgccta cctaccaaggagcatgtggatgtgatttccaagtttgcccagctggagttccagctgggg gatgcagagcgaggcaaagccatttttgaaagcatactgagtacctatccaaagcgcaca gatgtctggtcagtctacattgacatgctcatcaagcatgggagccagaaggaagtccgg gacatctttgagcgggtcattcatctgagcttggcccccaagagaatgaagttctttttt aagcgctacctggactttgagaagcaacacggcactgagaaggacgtgcaagcagtcaag acgaaggccctggaatatgtggaggccaagagctcagtgctggaggactag

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