Castor canadensis (American beaver): 109697271
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Entry
109697271 CDS
T04791
Symbol
Taf5
Name
(RefSeq) transcription initiation factor TFIID subunit 5
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
ccan
Castor canadensis (American beaver)
Pathway
ccan03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
ccan00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
109697271 (Taf5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccan03021
]
109697271 (Taf5)
03036 Chromosome and associated proteins [BR:
ccan03036
]
109697271 (Taf5)
Transcription machinery [BR:
ccan03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
109697271 (Taf5)
Coactivators
SAGA/TFTC/STAGA complex
109697271 (Taf5)
Chromosome and associated proteins [BR:
ccan03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
109697271 (Taf5)
STAGA complex
109697271 (Taf5)
TFTC complex
109697271 (Taf5)
SAGA complex
109697271 (Taf5)
SLIK complex
109697271 (Taf5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
TFIID_NTD2
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_EML_2
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
WDR55
NBCH_WD40
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
ANAPC4_WD40
Beta-prop_TEP1_C
Beta-prop_SCAP
Beta-prop_IFT122_1st
WDR90_beta-prop_4th
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
Beta-prop_Vps41
Beta-prop_EIPR1
Beta-prop_DCAF4
WD40_RFWD3
Beta-prop_HPS5
Beta-prop_WDR19_1st
Beta-prop_SPT8
WD_LRWD1
Beta-prop_DCAF12
Beta-prop_Nup120_160
PEP5_VPS11_N
RAB3GAP2_N
CDK5RAP3
Beta-prop_RIG_1st
eIF2A
Cytochrom_D1
ABM-like
PROPPIN
Motif
Other DBs
NCBI-GeneID:
109697271
NCBI-ProteinID:
XP_020036368
UniProt:
A0A8C0ZUJ8
LinkDB
All DBs
Position
Unknown
AA seq
800 aa
AA seq
DB search
MAALAEEQTEVAVKLEPEGPPTLLPPQAGDGAGEGSGSTPNNGPNGGGGNVAASSSASGD
GGTPKPAVAVSAAAPAGAAPVPAAAAEAGAPHDRQTLLAVLQFLRQSNLREAEEALRREA
RLLEEAVAGSGAPGEVDGAGAEAASALLSRVTASAPGSAAPEPPGTGTSGATVISGSASG
PAAPGKVGSVAVEDQPDVSAVLSAYNQQGDPTMYEEYYSGLKHFIECSLDCHRAELSQLF
YPLFVHMYLELVYNQHENEAKSFFEKFHGDQECYYQDDLRVLSSLTKKEHMKGNETMLDF
RTSKFVLRISRDSYQLLKRHLQEKQNNQIWNIVQEHLYIDIFDGMPRSKQQIDAMVGSLA
GEAKREANKSKVFFGLLKEPEIEVPLDDEDEEGESEEGKPKKKKPKKDSIGSKSKKQDPN
APPQNRIPLPELKDSDKLDKIMNMKETTKRVRLGPDCLPSICFYTFLNAYQGLTAVDVTD
DSSLIAGGFADSTVRVWSVTPKKLRSVKQASDLSLIDKESDDVLERIMDEKTASELKILY
GHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYF
VSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGN
CVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFS
RDGEILASGSMDNTVRLWDAIKAFEDLETDDFTTATGHINLPENSQELLLGTYMTKSTPV
VHLHFTRRNLVLAAGAYSPQ
NT seq
2403 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgctggcggaggagcagacggaggtggcggtcaagctagagcctgagggaccg
ccgacgctgctacctccccaggcgggcgacggcgcaggcgagggtagcggcagcactccc
aacaacggccccaacggcggcggcgggaatgttgcggcgtcgtcgtcggccagtggggac
ggcgggacccccaagcccgcggtggctgtctccgccgctgccccggcgggggcggctccg
gtacccgccgctgctgcggaggctggcgctccccatgaccgacagactctgctagccgtg
ctgcagttcctacggcagagcaacctccgcgaggccgaagaggcgctgcgccgggaggcc
cggctgttggaggaggcagtggcgggctccggagccccgggagaggttgacggtgccggc
gccgaagcggctagcgcgcttctcagccgggtcactgcctcagctcccggctctgcggcc
cccgagcctccgggcaccggcacttcgggggccacggtcatctcgggctcagcttcaggt
cctgcggctccggggaaagttggaagtgtagctgtggaagatcagccagatgtcagtgct
gtcttgtcggcctacaaccaacaaggagaccccacaatgtatgaagaatactatagtgga
ctcaaacacttcattgaatgttctctggactgccatcgggcagaattatcccaactcttt
tatcctctgtttgtacatatgtacttggaactagtctataatcaacatgaaaatgaagca
aaatcattctttgagaagttccatggagatcaggaatgttattaccaggatgacctacga
gtattatctagtcttaccaaaaaggaacacatgaaagggaatgaaaccatgttggatttt
cgaacaagtaaatttgttctgcgtatttcccgtgactcgtaccaactcttgaagaggcat
cttcaggagaaacagaacaatcagatttggaacatagttcaggagcacctctacattgac
atctttgatgggatgccgcgtagtaagcaacagatagatgcgatggtgggaagtttggca
ggagaggctaaacgagaggcaaacaagtcaaaggtattttttggtttattaaaagaacca
gaaattgaagtacctttggatgatgaagatgaagaaggagaaagtgaagaaggaaaacct
aaaaagaagaagcctaaaaaagacagtattggatctaaaagcaaaaaacaagatcccaat
gctccacctcaaaacagaatccctcttcctgagttgaaagattcagataaattggataag
ataatgaatatgaaagaaaccaccaaacgagtacgccttgggccagactgcttaccctcc
atttgtttctatacattccttaatgcttaccagggcctcactgcagtggatgtcactgat
gattctagtctgattgctggaggttttgcagattcaactgtcagagtgtggtctgtgaca
cccaaaaagcttcgtagtgtcaaacaagcatcagatctcagcctcatagacaaagaatca
gatgatgttttagaaagaatcatggatgagaaaactgcaagtgagttgaagattttgtat
ggtcacagtgggcctgtctatggagccagcttcagtccagataggaattatctgctttcc
tcttcagaggatggaactgttagattgtggagtcttcaaacatttacttgcttggtggga
tataaaggacacaactacccagtatgggacacacagttttctccatatggatattatttt
gtgtcagggggccatgaccgagtagctcggctttgggctacagaccactatcagccttta
aggatatttgctggccatcttgctgatgtgaattgtaccagattccatccaaattcaaat
tatgttgctacgggctctgcagacagaactgtgaggctttgggatgttctgaatggtaac
tgtgtaaggatcttcactggacacaagggaccaattcattccttgacattttctcccaat
gggagattcctggctacaggagcaacagatggcagagtacttctttgggatattggacac
ggtttgatggttggagaattaaaaggacacactgatacagtctgttcacttaggtttagt
agagatggagaaattttggcatcaggttcaatggataatacagtccggttatgggatgcc
attaaagcatttgaagacttagagactgatgactttactacagccactggacatataaat
ttacctgagaattcacaggaattattattgggtacatatatgaccaaatcaacaccagta
gtacacctacattttactcgaagaaacttggttctagctgcaggagcttacagtccacaa
taa
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integrated database retrieval system
