Castor canadensis (American beaver): 109697559
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Entry
109697559 CDS
T04791
Symbol
Atg2b
Name
(RefSeq) autophagy-related protein 2 homolog B isoform X1
KO
K17906
autophagy-related protein 2
Organism
ccan
Castor canadensis (American beaver)
Pathway
ccan04136
Autophagy - other
ccan04140
Autophagy - animal
ccan05010
Alzheimer disease
ccan05014
Amyotrophic lateral sclerosis
ccan05016
Huntington disease
ccan05017
Spinocerebellar ataxia
ccan05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
ccan00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
109697559 (Atg2b)
04136 Autophagy - other
109697559 (Atg2b)
09160 Human Diseases
09164 Neurodegenerative disease
05010 Alzheimer disease
109697559 (Atg2b)
05014 Amyotrophic lateral sclerosis
109697559 (Atg2b)
05016 Huntington disease
109697559 (Atg2b)
05017 Spinocerebellar ataxia
109697559 (Atg2b)
05022 Pathways of neurodegeneration - multiple diseases
109697559 (Atg2b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccan04131
]
109697559 (Atg2b)
03029 Mitochondrial biogenesis [BR:
ccan03029
]
109697559 (Atg2b)
Membrane trafficking [BR:
ccan04131
]
Autophagy
Autophagosome formation proteins
Atg18-Atg2 complex
109697559 (Atg2b)
Mitochondrial biogenesis [BR:
ccan03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
109697559 (Atg2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATG2_CAD
VPS13_N
DUF7054
Motif
Other DBs
NCBI-GeneID:
109697559
NCBI-ProteinID:
XP_020036835
UniProt:
A0A8B7W378
LinkDB
All DBs
Position
Unknown
AA seq
2077 aa
AA seq
DB search
MPWPFSESIKKRACRYLLQRYLGHFLQEKLSLEQLSLDLYQGTGSLAQVPLDKWCLNEIL
ESADAPLEVTEGFIQSISLSVPWGSLLQDNCALEVKGLEMVFRPRPRLATGSEPMYWSSF
MTSSMQLAKECLSQKLTDEQGEGSQPFEGLEKFAETIETVLRRVKVTFIDTVLRIEHVPE
NSKTGSALEIRIERTVYCDETADETSGINVHQPTAFAHKLLHLSGVSLFWDEFSASAKSS
PVCSTAPVETEPKLSPSWNPKIVYEPHPQLTRNLPEIAPSDPVQIGGLIGKLELSLTWKQ
NEVLPGAKLDVDGQIDSVHLFLSPRQVHLLLDMLAAVAGPENSSKIGLANKDRKNRPMQQ
EDEYRIQMELNRYYLRKDSLSVGVSSEQSFYETETARTPSSREEEVFFSMADMDMSHSLS
SLPPLGEPPNMDLELSLTSTYTNTPAGSPLSATVLQPTWGEFHDHHKEQPGRGSAFPSNL
AHTASLQKAALPSRSASVDESRPELIFRLAVGTFSVSVLHIDPLSPPETSLNLNPLTPMA
IAFFTCIEKIDSARFSEDFKSFRAVFAEACSHDHLRFIGTGIKVSYEQRQRSAARYFSTD
MSIGQMEFLECLFPTESHSLPPHYTELLTFHSKDGTDAHPPVCLQLHYKHSENRGSQGNQ
ARLSSVPQKAELQIKLKPVCCELDISIVDRLNSLLQPQKLTTVEMMASHMYTSYNKHISL
HKAFTEVFLDDSHNPANCRVSVQVATPALNLSVRFPIPDLRSDQERGPWFKKSLQKEILH
LAFTDLEFKTEFVGGSTPEQIKLELTFRELAGSFQEEKGEPSIKFFHVAGEVDVDTASSD
DFDWPRMVLKINPLAMHSILERIAAEEEEENDGHYQEEEEGGAHSLKDVCDLRRPAPSPF
SSRRVMFENEQMVMPGDPVEMTEFQDKAISNSHYVLELTLPNIHITLPNKSFYEKLYNRV
FNDLLLWEPTAPSPVETFENISYGIGLSVASQLINTFNKDSFSPFKSTVHYDEESGSEEE
TLQYFSTVDPNYRSRRKKKLDSQNKNSQSFFSVLLNINHGLMAVFTDVKQDNGDLLENKH
GEFWLEFNSGSLFCVTKYEGFDDKHYICLHSSSFSLYHKGIVDGVILPMETRLPYSTRPH
WLEPTIYSSEEDGLSRAASDGVGGDNLNMLSVAVKILSDKSESNTKEFLIAIGLKGATLQ
HRMLPAGLSWHEQILYFLNIADEPVLGYSPPTSFTTFHVHLWSCALDYRPLYLPIRSLLT
VETFSISSSVALDKSSSALRIIMDEAALHLSDKCNTVTINLNRDYVRVMDMGLLELTITA
VKSDSDGEQTEPHFELHCSSDIVHVRTCSDSCAALMNLIQYIASYGDLHAPNNAEMKSGA
PQRKPKVDSSGQSSSRGPVLPEADQQILRDLMSDAMEEIDVQQASSSVKPQANGVLDEKS
QIQEPCCSDLFLFPDESGNVSQEPGPAYASFTHHLINDAMTGVPTESDDFCILFAPKAAI
QEKEEEPVIKIMVDDAIVIRDNYFSLPVKKTDTSKAPLHFPIPVIRYVVKEVSLVWHLYG
GKDFGTVPPTSPAKSYISPHNSPSHTPTRHGCNVVYGGKGRNHDFLMEIQLSKVKFQHEV
YPPCKPESDSSLLEHPVSRQVFIVQDLEIRDRLATSQMNKFLYLYCSKEMPRKAHSNMLT
IKALHVRPESGRSPQECCLRVSLMPLRLNIDQDALFFLKDFFTSLSTEVEILLTPDPEVK
KSPGADVTCSLPRHWSTSKEPNLVISFPGPKHPSQNSSANSVEAVNGMEEKDLSVEEASF
SDQPVFFREFRFTAEVPIRLDYHGKHVSMDQGTLAGILIGLAQLNCSELKLKRLFYRHGL
LGIDKLFSYAITEWLNDIKKNQLPGILGGVGPMHSLVQLVQGLKDLVWLPIEQYRKDGRI
VRGFQRGAASFGTSTAMAALELTNRMVQTIQAAAETAYDMVSPGTLSIEPKKVKRFPHHR
LAHQPVDLREGVAKAYSVVKEGITDTAQTIYETAAREHESRGVTGAVGEVLRQIPPAVVK
PIIVATEATSNVLGGMRNQIRPDVRQDESQKWRHGED
NT seq
6234 nt
NT seq
+upstream
nt +downstream
nt
atgccttggccattttcagagtctatcaagaagagggcctgtcggtacctcctgcagagg
tacctaggccattttctgcaggagaagctgagcctggagcagctcagcttagatctgtat
cagggcaccgggtccctcgcccaggtccccttggacaaatggtgtctcaatgaaatcctg
gagtcagcagatgcacctttagaagtcactgaaggattcattcagtcaatttcactgtca
gttccatggggctccttgctgcaggataattgtgcactggaagtgaaagggttagaaatg
gtattccgacctagacctcgcctagcaactggttctgagcctatgtattggtcaagtttt
atgaccagcagtatgcagttggcaaaagaatgtctgagtcagaaactaacagatgaacaa
ggagaaggatcccaaccttttgaaggacttgaaaagtttgctgaaaccattgaaacagtg
ctaagaagagtaaaagtaacatttatagatactgttttgagaattgaacatgtgccagaa
aattccaaaactggatctgcacttgaaattcgaatagaaagaacagtctactgtgatgaa
actgctgatgaaacctcaggaattaatgtacatcagcccacagcttttgctcacaagtta
cttcacctctctggagtgtctctcttctgggatgagttttctgcatcagcaaaatcttcc
ccggtgtgttcaactgctccagtggaaactgagccaaagctatcacctagttggaacccc
aaaattgtatatgaaccacatccacaactaactagaaatttaccagaaatagcaccctct
gatccagtgcagattggaggtttaattggcaagttggagttgagtctcacatggaaacag
aatgaagtacttcctggagctaagttggatgttgatggacagatagactccgttcatcta
ttcctgtcaccgaggcaggtacatttgctcttggatatgttagcagctgttgctggacca
gaaaattctagcaaaatagggttagctaataaagataggaaaaaccgacccatgcagcag
gaagacgagtatcgaattcaaatggaattaaaccggtattatttgagaaaagattccctc
tctgtgggtgtatcttcagagcaaagcttttatgagacagaaacggctcgtacaccttct
agccgtgaagaagaagttttcttctccatggctgatatggacatgtcccatagtctctct
tctcttccaccccttggggaacccccaaatatggacctggaattatcattaactagtaca
tacacaaataccccagcaggatctccattaagtgctactgtgcttcagccaacttggggt
gagtttcatgatcatcataaagaacagccagggagagggtcagcattcccatccaaccta
gctcacacagcatctctacagaaggctgctctcccatctagatctgcttcagtggatgaa
tcgaggcctgagcttatttttagactagctgttggaactttttcagtctctgtgcttcac
attgatcctttatctccgcctgaaacatcattgaacctcaatcccctgacacctatggcc
atagctttctttacttgtatagaaaagatcgattcagcaagattttcagaagattttaag
tctttccgagcagtatttgcagaagcttgctcacatgatcaccttagatttataggtact
ggcattaaagtatcctatgagcaaagacaaagatcagctgcccgatattttagtactgat
atgtccattgggcaaatggagtttttggagtgtctgtttccaactgagtctcactcactt
cctcctcactatacagagcttttaacgttccattccaaagatggaactgatgcccacccc
cctgtgtgtcttcagcttcattataagcattctgagaatagaggatcacagggtaatcaa
gcaagacttagttcagttcctcagaaggcggaattacaaattaaattaaagccagtatgt
tgtgaactggatatcagtattgtggacaggttaaattccttgcttcaaccacagaaactt
actacagtagagatgatggcgtctcacatgtatacttcatataataagcatattagtctg
cacaaggctttcactgaagtatttctagatgattcacataaccctgcaaattgtcgggta
tcagtacaagttgctacgccagcgttaaatctttctgttcgctttccaattcctgatctt
cggtcagatcaagagagaggaccatggtttaagaagtcacttcagaaggagatccttcat
ttagcattcacagatctggaatttaagacagaatttgtaggaggatcaactccagaacaa
attaaattggaacttacctttagagaactagctgggtcatttcaggaagagaaaggagag
ccatctataaaatttttccatgtggctggtgaagtagatgtagatacagcatcgtcagat
gactttgattggccacgaatggtattgaaaataaatccactggccatgcattccattttg
gagagaatagcagctgaggaggaagaagagaatgatggtcactatcaggaagaagaggaa
ggaggtgctcattccctgaaagatgtctgtgacctcaggagaccagccccatctcctttt
tcttctcgtagagtaatgtttgaaaatgaacagatggtgatgccaggagaccctgtagaa
atgacagagtttcaggataaagcaatcagcaattctcactatgtgctggaacttacgtta
ccaaatattcatataacactccctaataaaagcttttatgagaaactttataatagggtc
tttaatgatttgctactctgggagccaacagctccttcaccagtggagacatttgaaaat
atttcctatggtattgggctttcagtagccagtcaacttattaacaccttcaacaaagat
agtttcagtccatttaaatctacagttcactatgatgaagaaagtggatctgaagaagag
actttgcagtatttttccacggttgatcccaactatcgttcccgtaggaagaaaaaatta
gactctcagaataagaactctcagagtttcttctcagttcttctgaacattaatcatgga
ttaatggcagtgttcacagatgtaaagcaagataatggagatctcttggaaaacaagcat
ggtgaattctggttagagttcaatagtggctcattattttgtgtgacaaaatatgaaggc
tttgatgacaagcactatatttgccttcattccagcagtttcagtctctaccacaaaggc
atagtggatggagtgattctccctatggaaacacgattgccttattcaacacgcccacat
tggttggaacctactatttattcctctgaagaagatggcctcagtagagctgcttcagat
ggtgttggaggagataatttgaatatgctctcagttgcagttaaaatactgtctgataaa
tcagagtccaatacaaaggaatttctcattgctataggactcaaaggagccactctgcag
cacagaatgcttcctgctggcctcagctggcatgagcagattttatacttcttgaatatt
gctgatgagcctgttttgggatatagtcctccaacttcatttacaacttttcatgttcat
ctttggagctgtgcacttgattacaggcccctttatttgccaatccgatctcttcttact
gttgaaacattcagcatttctagtagtgttgcactggataagtcatcttctgctctcaga
ataatcatggatgaagctgctttacatctgtctgacaaatgtaatactgtcactataaat
ttgaatagagattatgttcgtgtgatggatatggggcttttagaattaaccataactgca
gtgaagtctgattctgatggagagcaaactgagccccactttgagttacactgttccagt
gatattgtacatgtcagaacatgttcagactcttgtgctgcactgatgaatctcattcag
tacatcgcaagttacggtgacttacatgcgcctaacaatgcagaaatgaagagtggagcc
cctcagagaaagccaaaggtagattccagtggtcaatcatcttcacgtggtccagtgctt
cctgaagcagatcaacagattttacgagacctgatgagtgatgctatggaggagattgat
gtacaacaagcctcttcatctgtaaagccacaggctaatggtgttttggatgaaaaatct
caaattcaggagccatgttgttcagacctcttcctgttcccagatgagagtggaaatgtg
tcccaggagcctggccctgcatatgcctcatttactcaccacttgattaatgatgcaatg
acaggtgtgcccactgaaagtgatgacttttgcatcctttttgcaccaaaagcagccatc
caggagaaggaagaagaaccagtaataaaaatcatggttgatgatgcaattgtgataaga
gacaattattttagcctgcctgttaagaagacagatacaagcaaagccccattacacttt
cccattcctgtaattcggtatgttgttaaggaagtctctcttgtgtggcatctttatgga
ggcaaggattttggaacagtccctcctacttctccagctaaaagttacattagtccccat
aactcaccttctcacacacccaccaggcatggatgtaatgtggtatatggagggaaggga
aggaaccatgactttttaatggaaatacagttaagtaaggtgaagtttcagcatgaagtt
tatcccccatgcaaaccagaaagtgattccagcctcttagaacacccagtctctcggcag
gtgttcattgttcaggatcttgaaattcgagatcggcttgcaacatcacaaatgaataaa
tttttgtacctatattgcagcaaagaaatgcctcgaaaagctcattccaacatgttgaca
attaaagcattacatgtgcgaccagagtctggcaggtcaccacaggaatgctgcttgaga
gtgtcattgatgccactacgcctcaatatcgaccaggatgccttgttcttcctaaaagat
ttcttcacaagtctttctacagaagtggagattctactgactccagatccagaagttaaa
aagtctcctggagctgatgttacctgcagtttgccaaggcattggagtacctcaaaggag
ccaaacttagttatttctttccctgggccaaaacatccttcccaaaacagtagtgccaac
tcagtggaggctgttaatggaatggaagaaaaagacctctcagttgaagaagcatcgttt
agtgaccagcctgtgttttttagagaattcagatttacggcagaagttcctattcgactt
gattatcatggcaaacatgtatcaatggatcagggtacattagctggaattttgattggc
ctggcacagctgaactgctctgagctaaagctgaagaggctcttctaccggcatggtttg
ctaggtattgacaaattattctcatatgcaatcactgaatggctcaatgacattaagaag
aaccagctgccaggaatcctgggtggtgttgggcctatgcattcactagtacaattagtg
caaggtctgaaggacttggtctggttacccatagaacagtaccggaaggatggccgtatt
gtcagaggattccagagaggtgctgcttcttttggcacctcaactgcaatggctgctcta
gagctcacaaacagaatggttcaaaccatacaggcagcagcagagactgcttatgacatg
gtgtctcctggcaccctgtccattgagcccaagaaggtcaaaaggtttcctcatcaccgc
ttagctcaccagccagtagacctgagggaaggagtggccaaggcctacagtgttgtaaaa
gaggggatcacagacacagctcaaaccatttatgaaacagcagctcgagaacacgagagc
agaggggtgacaggtgcagtgggagaagtcctgcggcagattcctcccgcggtggtgaaa
cctataattgttgccacagaagcaacatcaaacgtgttaggtggcatgagaaaccaaatt
agaccagatgttcggcaggatgaatcacagaaatggcgccatggggaagactga
DBGET
integrated database retrieval system
