Castor canadensis (American beaver): 109698046
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Entry
109698046 CDS
T04791
Symbol
Dhx15
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
ccan
Castor canadensis (American beaver)
Pathway
ccan03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ccan00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109698046 (Dhx15)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ccan03041
]
109698046 (Dhx15)
03009 Ribosome biogenesis [BR:
ccan03009
]
109698046 (Dhx15)
Enzymes [BR:
ccan01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
109698046 (Dhx15)
Spliceosome [BR:
ccan03041
]
Complex A
U2 snRNP components
U2 related factors
109698046 (Dhx15)
Complex B
109698046 (Dhx15)
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
109698046 (Dhx15)
Ribosome biogenesis [BR:
ccan03009
]
Eukaryotic type
90S particles
Helicases
109698046 (Dhx15)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
HA2_N
DEAD
AAA_22
AAA_19
SRP54
nSTAND3
Atrophin-1
AAA_29
Flavi_DEAD
AAA_25
Motif
Other DBs
NCBI-GeneID:
109698046
NCBI-ProteinID:
XP_020037586
UniProt:
A0A250Y579
LinkDB
All DBs
Position
Unknown
AA seq
795 aa
AA seq
DB search
MSKRHRLDLGEDYPSGKKRAGTDGKDRDRDRDREDRSKDRDRERDRGDREREREKEKEKE
LRASTNAMLISAGLPPLKASHSAHSTHSAHSTHSTHSAHSTHTGHAGHTSLPQCINPFTN
LPHTPRYYDILKKRLQLPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWCVEYMRS
LPGPKRGVACTQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTILKYMTDGM
LLREAMNDPLLERYGVIILDEAHERTLATDILMGVLKEVVRQRSDLKVIVMSATLDAGKF
QIYFDNCPLLTIPGRTHPVEIFYTPEPERDYLEAAIRTVIQIHMCEEEEGDLLLFLTGQE
EIDEACKRIKREVDDLGPEVGDIKIIPLYSTLPPQQQQRIFEPPPPKKQNGAIGRKVVVS
TNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRAGRAGRTRPGK
CFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHFDFMDPPAPETLMRAL
ELLNYLAALNDDGDLTELGSMMAEFPLDPQLAKMVIASCDYNCSNEVLSITAMLSVPQCF
VRPTEAKKAADEAKMRFAHIDGDHLTLLNVYHAFKQNHESVQWCYDNFINYRSLMSADNV
RQQLSRIMDRFNLPRRSTDFTSRDYYINIRKALVTGYFMQVAHLERTGHYLTVKDNQVVQ
LHPSTVLDHKPEWVLYNEFVLTTKNYIRTCTDIKPEWLVKIAPQYYDMSNFPQCEAKRQL
DRIIAKLQSKEYSQY
NT seq
2388 nt
NT seq
+upstream
nt +downstream
nt
atgtccaagcggcaccggctggacctaggggaggattacccctccggcaagaagcgtgcg
gggaccgatgggaaagatcgggatcgtgaccgggatcgtgaagatcggtctaaagatcga
gaccgggaacgtgatagaggagatagagagcgggagagggagaaggaaaaggaaaaggaa
ttgcgggcttcaactaatgctatgcttatcagtgctggattgccacctttaaaagcttcc
cattcagctcactcaacccactcagctcattcaacacattctacacattctgctcattca
acacacactggacacgcaggacacacatcacttccacagtgcattaatccattcaccaat
ttaccacatactcctcgatactatgatattcttaaaaaacgacttcagctccctgtttgg
gaatacaaggataggtttacagatattttagttagacatcagtcatttgtactggttggt
gaaactgggtctggtaaaacaacacagattccacagtggtgtgtggagtacatgcgatcg
ttaccaggacccaagagaggagttgcctgtactcagcccaggagagtggctgcaatgagt
gtggctcagagagttgctgatgaaatggatgtgatgttggggcaggaagttggttactcc
attcgatttgaagactgcagtagtgcaaaaaccattcttaagtatatgactgatggcatg
ctacttcgtgaagctatgaatgatcctctcctggagcgttacggtgtaataattcttgat
gaggctcatgaaagaacactggctacagatattctcatgggtgttctgaaggaggttgta
agacagagatcagatttaaaggttatagttatgagcgctactctagatgcaggaaaattc
cagatttactttgacaactgccctctcttgactattccgggccgtacacatcctgttgag
atcttttatactccagaaccagagagagattatcttgaagcagcaattcgaacagtgatc
cagattcatatgtgtgaggaggaggagggagatcttctcctttttttaaccggtcaagag
gaaattgatgaggcttgtaagagaataaagcgtgaggttgatgatttgggccctgaagtt
ggtgacattaaaatcattccattgtactccacacttccaccccagcagcagcaacgcatt
tttgagcctccacctccaaaaaaacaaaatggagcaattggaagaaaggtagttgtgtca
actaatattgcagagacatctttgacaatagatggtgtagtatttgtgattgatcctgga
tttgcaaaacaaaaggtgtacaatcctcgaatcagagtcgagtctctattggtgacagct
attagtaaagcttcagctcagcaaagggctggtcgagctggacgtaccagacctgggaaa
tgcttcagactttatacagagaaagcttataaaacagaaatgcaggataacacctatcct
gagattttacgttctaatttaggatcagttgtgttacaattgaagaagcttggtattgat
gatttggtgcattttgattttatggatccaccagctcctgaaactctaatgagagcctta
gaacttttgaattatctggctgctttaaatgatgatggagatctgactgaattgggatcc
atgatggcagagtttcctctagatccacaactggctaaaatggttattgcaagttgtgac
tacaactgttctaatgaggtcctatctattactgctatgttgtcagtcccacagtgtttt
gttcgccccacggaggccaagaaagctgcagatgaggccaagatgagatttgcccacata
gatggagatcatctgacactgctgaacgtctaccatgcttttaaacaaaatcatgaatcg
gttcagtggtgttatgacaacttcattaactataggtccctgatgtctgcagacaacgta
cgccagcagctatcgcgaattatggacagatttaacttgcctcgtcgaagtactgacttt
acaagcagggactattacattaatataagaaaagctttggttactgggtattttatgcag
gtggcacatttagaacgaacagggcattacttaactgtgaaagataaccaggtggttcag
ttgcatccctctactgttcttgaccacaagcctgaatgggtgctttataatgagtttgtt
ttaacaacaaaaaactacatccgaacgtgtacagatatcaagccagaatggttggtgaaa
attgcccctcaatattacgacatgagcaatttcccacagtgtgaagcaaagagacagttg
gaccgtattattgccaaacttcagtccaaggaatattcacagtactga
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