Castor canadensis (American beaver): 109699101
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Entry
109699101 CDS
T04791
Symbol
Sox2
Name
(RefSeq) transcription factor SOX-2
KO
K16796
transcription factor SOX2 (SOX group B)
Organism
ccan
Castor canadensis (American beaver)
Pathway
ccan04390
Hippo signaling pathway
ccan04550
Signaling pathways regulating pluripotency of stem cells
Brite
KEGG Orthology (KO) [BR:
ccan00001
]
09130 Environmental Information Processing
09132 Signal transduction
04390 Hippo signaling pathway
109699101 (Sox2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04550 Signaling pathways regulating pluripotency of stem cells
109699101 (Sox2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccan03000
]
109699101 (Sox2)
Transcription factors [BR:
ccan03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
109699101 (Sox2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SOXp
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
109699101
NCBI-ProteinID:
XP_020039235
UniProt:
A0A8B7WAY5
LinkDB
All DBs
Position
Unknown
AA seq
320 aa
AA seq
DB search
MYNMMETELKPPGPQQTSGGGGGGGGNSTAAAAGGNQKNSPDRVKRPMNAFMVWSRGQRR
KMAQENPKMHNSEISKRLGAEWKLLSETEKRPFIDEAKRLRALHMKEHPDYKYRPRRKTK
TLMKKDKYTLPGGLLAPGGNSMASGVGVGAGLGAGVNQRMDSYAHMNGWSNGSYSMMQDQ
LGYPQHPGLNAHGAAQMQPMHRYDVSALQYNSMTSSQTYMNGSPTYSMSYSQQGTPGMAL
GSMGSVVKSEASSSPPVVTSSSHSRAPCQAGDLRDMISMYLPGAEVPEPAAPSRLHMSQH
YQSGPVPGTAINGTLPLSHM
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atgtacaacatgatggagacggagctgaagccgccgggcccgcagcaaacttcggggggc
ggcggcggaggcggcggcaactccaccgcggcggcggcgggcggcaaccagaaaaacagc
ccggaccgcgtcaagaggcccatgaacgccttcatggtgtggtcccgagggcagcggcgc
aagatggcccaggagaaccccaagatgcacaactcggagatcagcaagcgcctgggggcc
gagtggaaacttttgtcggaaacggagaagcggccgttcatcgacgaggccaagcggctg
cgagcgctgcacatgaaggagcacccggattataaataccggccgcggcggaaaaccaag
acgctcatgaagaaggataagtacacgctgcccggagggctgctggcccccggcggcaac
agcatggcgagcggggtcggggtgggcgccggcctgggcgcgggcgtgaatcagcgcatg
gacagttacgcgcacatgaacggctggagcaacggcagctacagcatgatgcaggaccag
ctgggctacccgcagcacccgggcctcaacgcgcacggcgccgctcagatgcagcccatg
caccgctacgacgtgagcgccctgcagtacaactccatgaccagctcccagacctacatg
aacggctcgcccacctacagcatgtcctactcgcagcagggcacccctggcatggcgctc
ggctccatgggttcggtggtcaagtccgaggccagctccagcccccccgtggttacctct
tcctcccactccagggcgccctgccaggccggggacctccgggacatgatcagcatgtac
ctccccggcgccgaggtgccggagcccgccgcccccagcagacttcacatgtcccagcac
taccagagcggcccggtgcccggcacggccattaatggcacactgcccctctcgcacatg
tga
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