Castor canadensis (American beaver): 109699136
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Entry
109699136 CDS
T04791
Symbol
Psmc1
Name
(RefSeq) 26S protease regulatory subunit 4 isoform X1
KO
K03062
26S proteasome regulatory subunit T2
Organism
ccan
Castor canadensis (American beaver)
Pathway
ccan03050
Proteasome
ccan05010
Alzheimer disease
ccan05012
Parkinson disease
ccan05014
Amyotrophic lateral sclerosis
ccan05016
Huntington disease
ccan05017
Spinocerebellar ataxia
ccan05020
Prion disease
ccan05022
Pathways of neurodegeneration - multiple diseases
ccan05165
Human papillomavirus infection
ccan05169
Epstein-Barr virus infection
ccan05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
ccan00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
109699136 (Psmc1)
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
109699136 (Psmc1)
09172 Infectious disease: viral
05169 Epstein-Barr virus infection
109699136 (Psmc1)
05165 Human papillomavirus infection
109699136 (Psmc1)
09164 Neurodegenerative disease
05010 Alzheimer disease
109699136 (Psmc1)
05012 Parkinson disease
109699136 (Psmc1)
05014 Amyotrophic lateral sclerosis
109699136 (Psmc1)
05016 Huntington disease
109699136 (Psmc1)
05017 Spinocerebellar ataxia
109699136 (Psmc1)
05020 Prion disease
109699136 (Psmc1)
05022 Pathways of neurodegeneration - multiple diseases
109699136 (Psmc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
ccan03051
]
109699136 (Psmc1)
Proteasome [BR:
ccan03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
ATPase subunits
109699136 (Psmc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
Prot_ATP_ID_OB_C
AAA_lid_3
AAA_2
AAA_22
nSTAND3
DUF815
AAA_5
RuvB_N
AAA_16
AAA_28
AAA_25
AAA_14
AAA_3
RNA_helicase
ATPase
IstB_IS21
TIP49
AAA_11
NPHP3_N
Mg_chelatase
AAA_33
AAA_7
AAA_24
Parvo_NS1
NB-ARC
PhoH
NACHT
ABC_tran
Prot_ATP_ID_OB_N
AAA_18
AAA_30
TsaE
Motif
Other DBs
NCBI-GeneID:
109699136
NCBI-ProteinID:
XP_020039297
UniProt:
A0A250Y107
LinkDB
All DBs
Position
Unknown
AA seq
440 aa
AA seq
DB search
MGQSQSGGHGPGGGKKDDKDKKKKYEPPVPTRVGKKKKKTKGPDAASKLPLVTPHTQCRL
KLLKLERIKDYLLMEEEFIRNQEQMKPLEEKQEEERSKVDDLRGTPMSVGTLEEIIDDNH
AIVSTSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAP
QETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVA
NQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSG
GEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKT
KKRIFQIHTSRMTLADDVTLDDLIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFK
KSKENVLYKKQEGTPEGLYL
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atgggtcaaagtcagagtggtggtcatggtcctggaggtggcaaaaaggatgacaaggac
aagaaaaagaaatatgagcctcccgtaccaactagagtggggaaaaagaagaagaaaaca
aagggaccagatgctgccagcaaactgccactagtgacacctcacactcagtgccgctta
aaattactgaagttagagagaattaaagactatcttctcatggaggaggagttcattaga
aatcaggagcaaatgaagcccttagaagaaaaacaagaggaggaaagatcaaaggtggat
gatctgaggggaacaccaatgtccgtaggaaccttggaagagatcattgatgacaatcat
gccattgtgtctacatctgtgggctccgagcactatgtcagtatcctttcatttgtggac
aaggacttgctggaaccaggctgctcagtcttgcttaaccacaaggtacacgctgtgata
ggggtgctaatggatgacacagatcccctggtcacggtgatgaaggtggaaaaggccccc
caagagacctatgcagatattggagggttggacaaccagatccaggaaattaaggagtct
gtggagcttcctctcacccatcctgaatattatgaggagatgggtataaagccccctaag
ggggtcattctctacggcccacctggcacaggtaaaaccttgttagccaaagcagtagca
aaccaaacttcagccactttcttgagagtggttggctcagaacttattcagaagtaccta
ggcgatgggcccaaacttgtacgggaattgtttcgagttgctgaagaacacgcaccctcc
attgtgtttattgatgaaatcgatgccattgggaccaaaagatatgattcaaattctgga
ggtgagagagaaattcagcgaacaatgttggaactgttgaaccagttggatggatttgat
tcaaggggagatgtgaaagttatcatggccacaaaccgaatagaaactttggatccagca
ctgatcagaccaggccgcatcgacaggaaaatcgagttccccctgcctgatgaaaagact
aagaagcgcatctttcagattcacacaagcaggatgacactggctgatgacgtaacacta
gatgacttgatcatggcaaaggatgacctctccggagctgacatcaaggcaatctgtaca
gaagctggtctgatggccttgagagaacgcagaatgaaagtaacaaatgaagacttcaaa
aaatctaaagaaaatgttctctataaaaaacaagaaggcacccctgagggactctacctc
tag
DBGET
integrated database retrieval system
