Castor canadensis (American beaver): 109700072
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Entry
109700072 CDS
T04791
Symbol
Scaf4
Name
(RefSeq) LOW QUALITY PROTEIN: splicing factor, arginine/serine-rich 15
KO
K13167
SR-related and CTD-associated factor 4
Organism
ccan
Castor canadensis (American beaver)
Brite
KEGG Orthology (KO) [BR:
ccan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccan03021
]
109700072 (Scaf4)
03041 Spliceosome [BR:
ccan03041
]
109700072 (Scaf4)
Transcription machinery [BR:
ccan03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
109700072 (Scaf4)
Spliceosome [BR:
ccan03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR proteins
109700072 (Scaf4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CID
RRM_1
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
109700072
NCBI-ProteinID:
XP_020040679
UniProt:
A0A8B7WA03
LinkDB
All DBs
Position
Unknown
AA seq
1147 aa
AA seq
DB search
MDAVNAFNQELFSLMDMKPPISRAKMILITKAAIKAIKLYKHVVQIVEKFIKKCKPEYKV
PGLYVIDSIVRQSRHQFGTDKDVFGPRFSKNITATFQYLYLCPSEDKSKIVRVLNLWQKN
GVFKIEIIQPLLDMAAGTSNAAPVAENVTNNEGSPPPPVKVSSEPPQATPNSVPTVPQLP
SSDAFAAVAQLFQTTQGQQLQQILQTFQQPPKPQSPALDNAVMAQVQAITAQLKTAPTQP
PEQKAAFPPPEQKTAFDKKLLDRFDYDDEPEAVEESKKEDAAALTPAVPAAAAPAAPAVA
AAAAAAPAAPAPVATSPPPQAPFGFPGDGMQQPAYTQHQNLDQFQPRMMGIQDPMHHQVP
LPPNGQMPGFGLLPTPPFPPMAQPVIPPTPPVQQAFQPAFQAQNEPLTQKPHQQDMEVEQ
PCIPEVKRHMSDNRKSRSRSASRSPKRRRSRSGSRSRRSRHRRSRSRSRDRRRHSPRSRS
QERRDREKERERRQKGLPQIKSETASVCSTTLWVGQLDKRTTQQDVASLLEEFGPIESIN
MIPPRGCAYIVMVHRQDAYRALQKLSRGNYKVNQKSIKIAWALNKGIKADYKQYWDVELG
VTYIPWDKVKPEELESFCEGGMLDSDTLNPDWKGIPKKPENEVAQNGGAETSHTEPVSPI
PKALPVPVPPIPVPAPITVPPPQVPPHQPGPPVVGALQPPTFTPPLGIPPPGFGPGVPPP
PPPPPFLRPGFNPMHLPPGFLPPGPPPPITPPVSIPPPHTPPISIPNSTIAGINEDTTKD
LSIGNPIPTVVSGARGNAESGDSVKMYGSAVPPAAPTSLPTPPVTQPVSLLGTQGVAPGP
VIGLQAPSTGLLGARPGLIPLQRPPGMPPPHLQRFPLMPPRPMPPHMMHRGPPPGPGGFA
MPPPHGMKGPFPPHSPFVRPGGMPGLGGPGPGPGGPEDRDGRQQQPQQQQXQQQQQPPPP
QPQQPPPAQQPPPAQQPPQQFRNDSRQQFNSGRDQERFGRRSFGNRVENDRERYGNRDDR
DNSNRERREWGRRSPDRDRHRDLEERNRRSSGHRDRERDSRDRESRREKEENRGKEKPEA
TDRAGGNKALEPPLSQVGTVDTVSEPDKGEAAASSATVVKPSEESPAEATSSVEPEKDSS
SAAEAPR
NT seq
3444 nt
NT seq
+upstream
nt +downstream
nt
atggacgccgtcaacgccttcaaccaggagctcttttcacttatggatatgaaacctccc
atctccagagccaagatgattctcatcactaaagctgctattaaagctattaagctttat
aagcatgtagttcaaatagtagaaaagttcatcaaaaagtgtaaaccggagtacaaggtt
ccaggattatatgtaattgactcaattgtgcgacagtctcgtcatcagtttggaactgat
aaagatgtttttgggccaagattctctaaaaacataactgccacattccaatatttgtat
ctttgtccatctgaagataagagtaaaatagttcgtgtgctaaacctttggcaaaaaaac
ggagtgttcaaaattgaaattattcagcctcttttggacatggcagcaggaaccagtaat
gctgctccagttgcagaaaatgttaccaataatgaaggctcacccccacctccagtaaaa
gtttcttctgaacctccacaagccactccaaactccgtacctactgtaccacagttgccc
agctctgatgcttttgctgctgtggctcagctgtttcagacaactcaaggccagcagctt
caacagatccttcagacttttcaacaacctccaaaaccacagtcccctgcccttgacaat
gctgtgatggctcaggttcaggctatcacagctcagttaaagacagcacctacacaacca
cctgaacaaaaagctgctttccccccacctgaacaaaaaactgcgtttgacaagaagctg
cttgatagatttgattatgatgatgagccagaagctgtggaagaatcaaaaaaagaggat
gctgctgccctcacccctgcagtccctgctgccgccgcacctgctgctcctgccgtggcc
gccgctgctgctgctgcccctgctgcccccgcaccagtcgccacctctcctcctccccag
gcaccattcggatttcctggagatggcatgcagcagccagcatatacacaacaccaaaat
ctagatcaatttcagcctcgaatgatgggaatacaagatccaatgcaccatcaggttcca
cttcctcctaatgggcagatgccaggatttgggcttcttcctacgcctccatttcctccc
atggctcagcctgtgattcctccaactccaccagtgcaacaggctttccagcctgctttc
caggcacaaaatgagccacttacacagaagccacatcagcaggacatggaagtagaacag
ccttgtattccagaggttaaacggcatatgtctgataacagaaagtcgagatctaggtca
gcatccaggtcaccaaaaaggagacggtctagatctggttctagatctcgaaggtctcgt
caccgacgttctcggtctcggtccagggataggcgccgacattctcctcgatctcgatcc
caggaaagacgagatcgagaaaaagagagggaacgtcgacaaaaaggtcttcctcaaatc
aaatcagaaactgcaagtgtttgcagtactacactctgggtgggacagctggacaaaagg
actactcagcaggatgttgccagtctcttggaagaatttggtccaatcgaatcaattaat
atgattcctcccaggggttgtgcctatattgttatggttcataggcaagatgcgtatcgt
gccctgcagaaactgagccgaggaaactataaagtaaaccagaaatctataaagattgcc
tgggccttaaacaaaggaataaaggcagattataaacagtattgggatgtagaacttggt
gttacttacattccatgggacaaagtcaagcctgaggaattggagagtttttgtgaagga
ggaatgttggacagtgacacccttaacccagattggaaaggaattcccaagaagcctgaa
aatgaagttgctcaaaatggaggtgcagaaacttcacacacagaaccagtatcacccata
cctaaagctttacctgtgccggtccctcctattcctgtccctgcacccataacagtgcca
cctccacaggtcccaccacatcagccgggtcctcctgtagttggtgccctccagccaccc
actttcacacctcccttgggaattccccctccaggctttggtcctggtgttccccctcct
cctcctcctccaccatttttgcgcccaggattcaatccaatgcatcttccaccaggtttt
cttcctcctggacccccacctcctataactccaccagtatccattcctcctcctcacact
ccaccaattagcatcccaaactctactatcgctggtataaatgaagacactacaaaagac
ttatctattggaaatcccattccaacagtggtatctggggctagaggaaacgccgagtct
ggtgacagtgtgaaaatgtatggctctgctgtgccacctgctgcacctacgagtctgccc
acccctcctgtaacccagcctgtttcacttcttggcactcaaggtgttgcacctggccct
gtaattgggctccaggcaccatccactggtcttcttggtgcccgacctggcctaattcca
ctgcagcgccccccaggaatgcctccacctcatttacaacgatttcctttgatgccaccc
cgccccatgccaccgcacatgatgcacagaggtccgccaccaggaccagggggctttgca
atgcctccgcctcatggaatgaaagggcctttcccaccacacagcccctttgttaggcct
ggaggaatgccagggcttgggggcccgggcccaggccctgggggtcctgaagacagagac
ggaaggcagcagcaaccacagcagcagcagncgcagcagcagcagcagccacctccacca
cagccacagcagccgccaccagctcagcagccaccaccagctcagcagccgccacagcag
tttagaaatgatagcaggcagcagttcaattcaggtagagaccaagaaaggtttggaaga
agatctttcggaaatagggtggaaaatgaccgggaacggtatgggaaccgtgatgataga
gataatagtaaccgtgaaaggagagagtggggaagaaggagccctgaccgcgacaggcac
agagacttggaagagagaaatagacgctctagtgggcatcgagacagagagagagattct
agagatagagagtctcgtagagagaaggaagaaaaccgaggaaaggaaaagcctgaggcc
acagacagggcaggtggtaacaaagcccttgaacctccccttagccaagtgggaaccgta
gacactgtttcagaacctgacaagggagaggccgcagccagctcagccacagtggtaaaa
ccctccgaagagtcacctgctgaggctacctcatccgttgaacctgaaaaggattctagc
tcagcagcagaggctcctcgctag
DBGET
integrated database retrieval system
