Castor canadensis (American beaver): 109700470
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Entry
109700470 CDS
T04791
Symbol
Sox17
Name
(RefSeq) transcription factor SOX-17
KO
K04495
transcription factor SOX17 (SOX group F)
Organism
ccan
Castor canadensis (American beaver)
Pathway
ccan04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
ccan00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
109700470 (Sox17)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccan03000
]
109700470 (Sox17)
Transcription factors [BR:
ccan03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
109700470 (Sox17)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
Sox17_18_mid
HMG_box_2
HMG_WDHD1
HTH_24
Motif
Other DBs
NCBI-GeneID:
109700470
NCBI-ProteinID:
XP_020041251
UniProt:
A0A8C0XPF3
LinkDB
All DBs
Position
Unknown
AA seq
413 aa
AA seq
DB search
MSSPDAGYASDDQSQPRSALPAVMAGLGPCPWAESLSPLGDVKVKGEAAASSGAPAGASG
RAKGESRIRRPMNAFMVWAKDERKRLAQQNPDLHNAELSKMLGKSWKALTLAEKRPFVEE
AERLRVQHMQDHPNYKYRPRRRKQVKRLKRVEGGFLHGLAEPQAAALGPDGGRVAMDGLG
LPFPEQGFPAGPPLLPPHMSGHYRDCQGLGAPPIDGYPLPTPDTSPLDGVEPDPAFFAAP
LPGDCPAAGAYSYAQVSDFAVPPEPPAGPMHPRLGPEPAGPAMPGLLAPPSALHMYYGAM
GSPAAGAGRGFHMQPPSQQQPQQHPAPGPGQPSPPPEALPCRDTTDPSQPAELLGEVDRT
EFEQYLHFVCKPEMGLPYQGHDCGVNVPDSHGAISSVVSDASSAVYYCNYPDV
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcccggatgcgggatacgccagtgacgaccagagccagccccggagcgcactg
cccgcggtgatggcagggctgggtccctgcccctgggccgagtcactgagtcccctcggg
gacgtgaaggtgaagggcgaggcggcggcgagtagcggggcgccggcgggggcctcgggc
cgagccaagggcgagtcccgcattcggcgaccgatgaacgccttcatggtgtgggccaag
gacgagcgcaagcggctggcgcagcaaaacccggacttgcacaacgctgagctgagcaag
atgctaggcaagtcgtggaaggcgctgacgctggcggagaagcggcccttcgtggaggag
gccgagcggctgcgcgtgcagcacatgcaggaccaccccaactacaagtaccggccccgg
cggcgcaagcaggtgaagcggctgaagcgggtggagggaggcttcctgcacggcctcgcc
gagccgcaggccgccgcgctgggccccgacggcggccgcgtggccatggacggcctgggc
ctgcccttcccagagcagggcttccccgccggccctccgctgctgcccccgcacatgagc
ggccactatcgcgactgccagggcctgggggcgccccctatcgacggctacccgctgccc
actcccgacacatccccgctggacggcgtggaaccggacccggccttcttcgctgccccg
ctacccggggactgcccggcggccggcgcctacagctacgcgcaggtctcggacttcgcg
gtgccaccggagccgcccgccggccccatgcacccgcgcctgggccccgagcccgcgggc
cctgctatgccgggcctcctggcgccccccagcgccctgcacatgtactacggcgcgatg
ggctcgcccgcggcgggcgccgggcgcggcttccacatgcagcccccgtcgcagcagcag
cctcagcagcaccccgcgcccggccctgggcagccctcgccgcctccagaggcgctgccc
tgccgggacaccacggaccccagccaacccgccgagctcctcggggaggtggaccgcacg
gaatttgaacagtatctgcattttgtgtgcaagccggagatgggtctcccctatcaggga
cacgactgcggtgtgaacgtcccagacagtcacggggccatttcctccgtggtgtccgat
gccagctctgcggtatattactgcaactatcccgacgtttga
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